RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 UPK1BO75841 260 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 DUSP14O95147 198 aaKnown RBP4.14□□□□□ -1.75
SUDS3-202ENST00000541280 PRSS1P07477 247 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 HLA-DRB4P13762 266 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 PAX9P55771 341 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 B2MP61769 119 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 HBG1P69891 147 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 HBG2P69892 147 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 OR2F1Q13607 317 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 ATP6V1FQ16864 119 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 KRTAP5-1Q6L8H4 278 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 CEMP1Q6PRD7 247 aaPredicted RBP4.14□□□□□ -1.75
SUDS3-202ENST00000541280 Q6ZRG5 221 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 ACOT7LQ6ZUV0 252 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 ZNF546Q86UE3 836 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 KRTAP7-1Q8IUC3 87 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 C11orf45Q8TAV5 145 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 SHANK2-AS3Q9BTD1 123 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 RPRMQ9NS64 109 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 NUDT15Q9NV35 164 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 HIGD1AQ9Y241 93 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 HLA-DRB4X5D2U9 266 aa4.14□□□□□ -1.75
SUDS3-202ENST00000541280 DNAH3Q8TD57 4116 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 SORL1Q92673 2214 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 TEX48A0A1B0GUV7 120 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 C7orf66A4D0T2 115 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 KNCNA6PVL3 124 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 ZNF705EA8MWA4 302 aaPredicted RBP4.13□□□□□ -1.75
SUDS3-202ENST00000541280 FAM25EA8MYX2 175 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 H3BP45 60 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 MPDU1O75352 247 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 METTL15P1P0C7V9 234 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 CXCL2P19875 107 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 BCAP31P51572 246 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 CAV2P51636 162 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 PSG9Q00887 426 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 C14orf177Q52M58 125 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 STX12Q86Y82 276 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 FAM24BQ8N5W8 94 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 OR1L4Q8NGR5 311 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 LINC00052Q96N35 136 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 LITAFQ99732 161 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 RSG1Q9BU20 258 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 SLC25A39Q9BZJ4 359 aaPredicted RBP4.13□□□□□ -1.75
SUDS3-202ENST00000541280 NMES1Q9C002 83 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 SLC25A31Q9H0C2 315 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 SAV1Q9H4B6 383 aaPredicted RBP4.13□□□□□ -1.75
SUDS3-202ENST00000541280 TBC1D24Q9ULP9 559 aa4.13□□□□□ -1.75
SUDS3-202ENST00000541280 A0A087X0K7 114 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 E5RGE8 158 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 INMT-MINDY4F8WBC2 141 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 H3BRN7 92 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 SOCS3O14543 225 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 GIG44P09565 113 aaPredicted RBP4.12□□□□□ -1.75
SUDS3-202ENST00000541280 OR5G3P0C626 314 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 LINC00869P0C866 280 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 RPL29P47914 159 aaKnown RBP4.12□□□□□ -1.75
SUDS3-202ENST00000541280 SULT1A1P50225 295 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 RRAS2P62070 204 aaPredicted RBP4.12□□□□□ -1.75
SUDS3-202ENST00000541280 IL15RAQ13261 267 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 GUK1Q16774 197 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 VWC2Q2TAL6 325 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 BPIFA4PQ86YQ2 179 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 TMEM252Q8N6L7 170 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 CSNK1G2-AS1Q8NCQ2 148 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 LRRC20Q8TCA0 184 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 PHLDA1Q8WV24 401 aaPredicted RBP4.12□□□□□ -1.75
SUDS3-202ENST00000541280 PFDN5Q99471 154 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 MARVELD1Q9BSK0 173 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 ARV1Q9H2C2 271 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 SLC25A22Q9H936 323 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 DNAJC4Q9NNZ3 241 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 LYRM2Q9NU23 88 aaPredicted RBP4.12□□□□□ -1.75
SUDS3-202ENST00000541280 UQCC1Q9NVA1 299 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 PPP1R14DQ9NXH3 145 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 DOK5Q9P104 306 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 RCL1Q9Y2P8 373 aaKnown RBP4.12□□□□□ -1.75
SUDS3-202ENST00000541280 GOLT1BQ9Y3E0 138 aa4.12□□□□□ -1.75
SUDS3-202ENST00000541280 LSM5Q9Y4Y9 91 aaKnown RBP4.12□□□□□ -1.75
SUDS3-202ENST00000541280 A0A0J9YX75 114 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 AGPAT2O15120 278 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 COX7A2P2O60397 106 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 SPART-AS1P0CW21 52 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 PET100P0DJ07 73 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 GATA2P23769 480 aaPredicted RBP4.11□□□□□ -1.75
SUDS3-202ENST00000541280 CAMLGP49069 296 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 BAXQ07812 192 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 SLC38A11Q08AI6 406 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 LCN15Q6UWW0 184 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 TMEM182Q6ZP80 229 aaPredicted RBP4.11□□□□□ -1.75
SUDS3-202ENST00000541280 LINC00305Q7Z4B0 112 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 Q8NAQ8 132 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 OR4B1Q8NGF8 309 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 SEC22CQ9BRL7 303 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 SLC50A1Q9BRV3 221 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 ARL6Q9H0F7 186 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 KCNIP2Q9NS61 270 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 WDR83OSQ9Y284 106 aa4.11□□□□□ -1.75
SUDS3-202ENST00000541280 RFNGQ9Y644 331 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms