RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 LY6G6CO95867 125 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 IGLV1-51P01701 117 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 IL6RP08887 468 aaPredicted RBP4.55□□□□□ -1.68
CPSF7-219ENST00000539952 PMCHP20382 165 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 G0S2P27469 103 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 GNG10P50151 68 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 BRWD1-AS2P59051 145 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 RPS20P60866 119 aaKnown RBP4.55□□□□□ -1.68
CPSF7-219ENST00000539952 POU2AF1Q16633 256 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 MORN2Q502X0 79 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 UTF1Q5T230 341 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 SLC24A4Q8NFF2 622 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 OR13A1Q8NGR1 328 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 RFESDQ8TAC1 157 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 VN1R17PQ8TDU5 208 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 CACNG8Q8WXS5 425 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 LINC00476Q8WZB0 136 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 LEAP2Q969E1 77 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 KCNS1Q96KK3 526 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 MGST2Q99735 147 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 PLEKHA3Q9HB20 300 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 NRN1Q9NPD7 142 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 SLC35D1Q9NTN3 355 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 NAT8BQ9UHF3 227 aa4.55□□□□□ -1.68
CPSF7-219ENST00000539952 FOXA2Q9Y261 457 aaPredicted RBP4.55□□□□□ -1.68
CPSF7-219ENST00000539952 TRAV41A0A0B4J266 112 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 SMIM27A0A1W2PRY6 76 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 C15orf61A6NNL5 157 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 LINC00473A8K010 186 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 G3V318 75 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 FCGR3BO75015 233 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 ZNF324O75467 553 aaPredicted RBP4.54□□□□□ -1.68
CPSF7-219ENST00000539952 HLA-DRB1P01911 266 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 APCSP02743 223 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 LGALS1P09382 135 aaKnown RBP4.54□□□□□ -1.68
CPSF7-219ENST00000539952 OR9G9P0C7N8 305 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 LINC00869P0C866 280 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 C8orf88P0DMB2 117 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 NPY1RP25929 384 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 REG1BP48304 166 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 AMTP48728 403 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 SUB1P53999 127 aaKnown RBP eCLIP4.54□□□□□ -1.68
CPSF7-219ENST00000539952 SLURP1P55000 103 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 LTC4SQ16873 150 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 SPATA45Q537H7 98 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 C2orf83Q53S99 150 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 IBA57Q5T440 356 aaKnown RBP4.54□□□□□ -1.68
CPSF7-219ENST00000539952 MIC13Q5XKP0 118 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 FAM53AQ6NSI3 398 aaPredicted RBP4.54□□□□□ -1.68
CPSF7-219ENST00000539952 Q6ZWC4 215 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 ATP5L2Q7Z4Y8 100 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 GTSCR1Q86UQ5 136 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 ARL6IP6Q8N6S5 226 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 ZNF439Q8NDP4 499 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 ZNF738Q8NE65 137 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 STXBP6Q8NFX7 210 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 OR1L4Q8NGR5 311 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 MRGPRDQ8TDS7 321 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 ARPC1AQ92747 370 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 GRAMD2BQ96HH9 432 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 TXN2Q99757 166 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 ATG101Q9BSB4 218 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 GNG12Q9UBI6 72 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 LAMTOR2Q9Y2Q5 125 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 V9GYV3 84 aa4.54□□□□□ -1.68
CPSF7-219ENST00000539952 IGHV4OR15-8A0A075B7B6 117 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 A0A087WW49 117 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 A0A1W2PS18 150 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 INS-IGF2F8WCM5 200 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 C15orf65H3BRN8 121 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 M0R1X1 148 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 RRHO14718 337 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 NUPR1O60356 82 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 CNIH1O95406 144 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 OR5AL1P0C617 328 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 IGLC2P0DOY2 106 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 IGLC3P0DOY3 106 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 HIST1H1EP10412 219 aaKnown RBP4.53□□□□□ -1.68
CPSF7-219ENST00000539952 CBLN1P23435 193 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 CTRLP40313 264 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 HNRNPA3P51991 378 aaKnown RBP4.53□□□□□ -1.68
CPSF7-219ENST00000539952 ERHP84090 104 aaKnown RBP4.53□□□□□ -1.68
CPSF7-219ENST00000539952 OR5I1Q13606 314 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 KLF5Q13887 457 aaPredicted RBP4.53□□□□□ -1.68
CPSF7-219ENST00000539952 MMDQ15546 238 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 LINC00322Q6ZN03 302 aaPredicted RBP4.53□□□□□ -1.68
CPSF7-219ENST00000539952 TMEM136Q6ZRR5 245 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 OR8I2Q8N0Y5 310 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 STPG3Q8N7X2 389 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 OR1L8Q8NGR8 309 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 NABP2Q9BQ15 211 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 TMEM14BQ9NUH8 114 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 TMEM140Q9NV12 185 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 TP53TG3Q9ULZ0 132 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 PAM16Q9Y3D7 125 aa4.53□□□□□ -1.68
CPSF7-219ENST00000539952 TRBV20OR9-2A0A075B6H5 130 aa4.52□□□□□ -1.69
CPSF7-219ENST00000539952 TRAV9-2A0A087WT02 112 aa4.52□□□□□ -1.69
CPSF7-219ENST00000539952 IGHV7-81A0A0B4J1V7 117 aa4.52□□□□□ -1.69
CPSF7-219ENST00000539952 A0A1W2PN81 502 aa4.52□□□□□ -1.69
CPSF7-219ENST00000539952 GRIFINA4D1Z8 144 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms