RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 RPUSD4Q96CM3 377 aaKnown RBP8.03□□□□□ -1.12
LEMD3-202ENST00000539442 SERTM2A0A1B0GWG4 89 aa8.02□□□□□ -1.13
LEMD3-202ENST00000539442 TMEM218A2RU14 115 aa8.02□□□□□ -1.13
LEMD3-202ENST00000539442 C9JQL5 133 aa8.02□□□□□ -1.13
LEMD3-202ENST00000539442 SAP30O75446 220 aa8.02□□□□□ -1.13
LEMD3-202ENST00000539442 SLC25A5P05141 298 aaKnown RBP8.02□□□□□ -1.13
LEMD3-202ENST00000539442 SFTA3P0C7M3 94 aa8.02□□□□□ -1.13
LEMD3-202ENST00000539442 ID1P41134 155 aa8.02□□□□□ -1.13
LEMD3-202ENST00000539442 CSN1S1P47710 185 aa8.02□□□□□ -1.13
LEMD3-202ENST00000539442 INSL3P51460 131 aa8.02□□□□□ -1.13
LEMD3-202ENST00000539442 RBPMS2Q6ZRY4 209 aaKnown RBP8.02□□□□□ -1.13
LEMD3-202ENST00000539442 EXOC3-AS1Q8N2X6 119 aa8.02□□□□□ -1.13
LEMD3-202ENST00000539442 CYB561D1Q8N8Q1 229 aa8.02□□□□□ -1.13
LEMD3-202ENST00000539442 DCANP1Q8TF63 244 aa8.02□□□□□ -1.13
LEMD3-202ENST00000539442 C16orf92Q96LL3 132 aa8.02□□□□□ -1.13
LEMD3-202ENST00000539442 ATG101Q9BSB4 218 aa8.02□□□□□ -1.13
LEMD3-202ENST00000539442 MCRIP2Q9BUT9 160 aaKnown RBP8.02□□□□□ -1.13
LEMD3-202ENST00000539442 MS4A6AQ9H2W1 248 aa8.02□□□□□ -1.13
LEMD3-202ENST00000539442 EPDR1Q9UM22 224 aa8.02□□□□□ -1.13
LEMD3-202ENST00000539442 TRAV8-2A0A0B4J237 113 aa8.01□□□□□ -1.13
LEMD3-202ENST00000539442 KRBOX1C9JBD0 128 aa8.01□□□□□ -1.13
LEMD3-202ENST00000539442 K7EQG2 157 aa8.01□□□□□ -1.13
LEMD3-202ENST00000539442 DNASE2O00115 360 aaPredicted RBP8.01□□□□□ -1.13
LEMD3-202ENST00000539442 PEX7O00628 323 aa8.01□□□□□ -1.13
LEMD3-202ENST00000539442 TCRAP04437 139 aa8.01□□□□□ -1.13
LEMD3-202ENST00000539442 SOHLH1Q5JUK2 328 aa8.01□□□□□ -1.13
LEMD3-202ENST00000539442 TMEM61Q8N0U2 210 aa8.01□□□□□ -1.13
LEMD3-202ENST00000539442 SPAG8Q99932 426 aaPredicted RBP8.01□□□□□ -1.13
LEMD3-202ENST00000539442 FBN1P35555 2871 aaKnown RBP8□□□□□ -1.13
LEMD3-202ENST00000539442 IGKV3-7A0A075B6H7 116 aa8□□□□□ -1.13
LEMD3-202ENST00000539442 OR4C46A6NHA9 309 aa8□□□□□ -1.13
LEMD3-202ENST00000539442 K7EQM0 130 aa8□□□□□ -1.13
LEMD3-202ENST00000539442 M0R3E3 92 aa8□□□□□ -1.13
LEMD3-202ENST00000539442 ATP6V1G1O75348 118 aa8□□□□□ -1.13
LEMD3-202ENST00000539442 IGLV1-51P01701 117 aa8□□□□□ -1.13
LEMD3-202ENST00000539442 S100A9P06702 114 aaKnown RBP8□□□□□ -1.13
LEMD3-202ENST00000539442 AKR1C3P42330 323 aa8□□□□□ -1.13
LEMD3-202ENST00000539442 CNN1P51911 297 aaKnown RBP8□□□□□ -1.13
LEMD3-202ENST00000539442 SNRPD3P62318 126 aaKnown RBP8□□□□□ -1.13
LEMD3-202ENST00000539442 PSG3Q16557 428 aa8□□□□□ -1.13
LEMD3-202ENST00000539442 CD300EQ496F6 205 aaPredicted RBP8□□□□□ -1.13
LEMD3-202ENST00000539442 FAM74A3Q4VXF1 159 aa8□□□□□ -1.13
LEMD3-202ENST00000539442 C9orf66Q5T8R8 295 aa8□□□□□ -1.13
LEMD3-202ENST00000539442 GBGT1Q8N5D6 347 aa8□□□□□ -1.13
LEMD3-202ENST00000539442 WFDC9Q8NEX5 89 aa8□□□□□ -1.13
LEMD3-202ENST00000539442 C2CD4CQ8TF44 421 aa8□□□□□ -1.13
LEMD3-202ENST00000539442 SEC11CQ9BY50 192 aa8□□□□□ -1.13
LEMD3-202ENST00000539442 PARLQ9H300 379 aa8□□□□□ -1.13
LEMD3-202ENST00000539442 TENM1Q9UKZ4 2725 aa7.99□□□□□ -1.13
LEMD3-202ENST00000539442 RBAKDNA6NC62 111 aa7.99□□□□□ -1.13
LEMD3-202ENST00000539442 FBLL1A6NHQ2 334 aaKnown RBP7.99□□□□□ -1.13
LEMD3-202ENST00000539442 DIRC3C9JPN6 131 aa7.99□□□□□ -1.13
LEMD3-202ENST00000539442 F8W036 122 aa7.99□□□□□ -1.13
LEMD3-202ENST00000539442 CD33P20138 364 aa7.99□□□□□ -1.13
LEMD3-202ENST00000539442 CEBPGP53567 150 aa7.99□□□□□ -1.13
LEMD3-202ENST00000539442 RIPPLY3P57055 190 aa7.99□□□□□ -1.13
LEMD3-202ENST00000539442 TAS2R60P59551 318 aa7.99□□□□□ -1.13
LEMD3-202ENST00000539442 GNG5P63218 68 aa7.99□□□□□ -1.13
LEMD3-202ENST00000539442 LCN12Q6JVE5 192 aa7.99□□□□□ -1.13
LEMD3-202ENST00000539442 RPH3ALQ9UNE2 315 aa7.99□□□□□ -1.13
LEMD3-202ENST00000539442 SELENOKQ9Y6D0 94 aa7.99□□□□□ -1.13
LEMD3-202ENST00000539442 WNK1Q9H4A3 2382 aa7.99□□□□□ -1.13
LEMD3-202ENST00000539442 TRBV6-1A0A0K0K1D8 114 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 ZNF727A8MUV8 499 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 ADCYAP1P18509 176 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 S100A1P23297 94 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 HLA-DMBP28068 263 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 RPL35P42766 123 aaKnown RBP7.98□□□□□ -1.13
LEMD3-202ENST00000539442 TFPI2P48307 235 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 UBE2G1P62253 170 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 TMEM183BQ1AE95 376 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 C10orf91Q5T1B1 145 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 IGFL4Q6B9Z1 124 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 GOLT1AQ6ZVE7 132 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 WFDC3Q8IUB2 231 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 RNF182Q8N6D2 247 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 TMEM75Q8N9X5 138 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 ZNF738Q8NE65 137 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 FMC1Q96HJ9 113 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 LINC00052Q96N35 136 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 SMIM7Q9BQ49 75 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 GPR61Q9BZJ8 451 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 CARHSP1Q9Y2V2 147 aaKnown RBP7.98□□□□□ -1.13
LEMD3-202ENST00000539442 KLF12Q9Y4X4 402 aa7.98□□□□□ -1.13
LEMD3-202ENST00000539442 C9JCJ5 164 aa7.97□□□□□ -1.13
LEMD3-202ENST00000539442 CMC4P56277 68 aaPredicted RBP7.97□□□□□ -1.13
LEMD3-202ENST00000539442 ZNF674Q2M3X9 581 aa7.97□□□□□ -1.13
LEMD3-202ENST00000539442 C20orf173Q96LM9 149 aa7.97□□□□□ -1.13
LEMD3-202ENST00000539442 NIPSNAP3BQ9BS92 247 aa7.97□□□□□ -1.13
LEMD3-202ENST00000539442 DERL1Q9BUN8 251 aa7.97□□□□□ -1.13
LEMD3-202ENST00000539442 ZNF256Q9Y2P7 627 aaPredicted RBP7.97□□□□□ -1.13
LEMD3-202ENST00000539442 LY96Q9Y6Y9 160 aa7.97□□□□□ -1.13
LEMD3-202ENST00000539442 ZNF705FA8MVS1 300 aaPredicted RBP7.96□□□□□ -1.14
LEMD3-202ENST00000539442 ZNF688P0C7X2 276 aa7.96□□□□□ -1.14
LEMD3-202ENST00000539442 PNRC1Q12796 327 aaPredicted RBP7.96□□□□□ -1.14
LEMD3-202ENST00000539442 GUCA2BQ16661 112 aa7.96□□□□□ -1.14
LEMD3-202ENST00000539442 PSMG4Q5JS54 123 aa7.96□□□□□ -1.14
LEMD3-202ENST00000539442 FAM24BQ8N5W8 94 aa7.96□□□□□ -1.14
LEMD3-202ENST00000539442 SMIM12Q96EX1 92 aa7.96□□□□□ -1.14
LEMD3-202ENST00000539442 FAM110AQ9BQ89 295 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms