RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 OR10G4Q8NGN3 311 aa11.43□□□□□ -0.58
RPAIN-206ENST00000539417 OR10G9Q8NGN4 311 aa11.43□□□□□ -0.58
RPAIN-206ENST00000539417 OR10G7Q8NGN6 311 aa11.43□□□□□ -0.58
RPAIN-206ENST00000539417 RNF141Q8WVD5 230 aa11.43□□□□□ -0.58
RPAIN-206ENST00000539417 PHYHIPLQ96FC7 376 aa11.43□□□□□ -0.58
RPAIN-206ENST00000539417 PSMG3Q9BT73 122 aaPredicted RBP11.43□□□□□ -0.58
RPAIN-206ENST00000539417 X6R8D5 127 aa11.43□□□□□ -0.58
RPAIN-206ENST00000539417 DYNC2H1Q8NCM8 4307 aaKnown RBP11.43□□□□□ -0.58
RPAIN-206ENST00000539417 M0R2Z0 102 aa11.42□□□□□ -0.58
RPAIN-206ENST00000539417 OR7C2O60412 319 aa11.42□□□□□ -0.58
RPAIN-206ENST00000539417 NBEAP1P0C6P0 100 aa11.42□□□□□ -0.58
RPAIN-206ENST00000539417 KCNRGQ8N5I3 272 aa11.42□□□□□ -0.58
RPAIN-206ENST00000539417 BOLA1Q9Y3E2 137 aa11.42□□□□□ -0.58
RPAIN-206ENST00000539417 KMT2CQ8NEZ4 4911 aaKnown RBP11.42□□□□□ -0.58
RPAIN-206ENST00000539417 HMSDA8MTL9 139 aa11.41□□□□□ -0.58
RPAIN-206ENST00000539417 CRXO43186 299 aaPredicted RBP11.41□□□□□ -0.58
RPAIN-206ENST00000539417 ZNF253O75346 499 aa11.41□□□□□ -0.58
RPAIN-206ENST00000539417 SPINK13Q1W4C9 94 aa11.41□□□□□ -0.58
RPAIN-206ENST00000539417 MUC7Q8TAX7 377 aa11.41□□□□□ -0.58
RPAIN-206ENST00000539417 FAM210AQ96ND0 272 aa11.41□□□□□ -0.58
RPAIN-206ENST00000539417 PLA2G2EQ9NZK7 142 aa11.41□□□□□ -0.58
RPAIN-206ENST00000539417 PLECQ15149 4684 aaKnown RBP11.4□□□□□ -0.58
RPAIN-206ENST00000539417 BORCS7-ASMTA0A0B4J1R7 106 aa11.4□□□□□ -0.58
RPAIN-206ENST00000539417 ZNF705EA8MWA4 302 aaPredicted RBP11.4□□□□□ -0.58
RPAIN-206ENST00000539417 RBMY1A1P0DJD3 496 aaKnown RBP11.4□□□□□ -0.58
RPAIN-206ENST00000539417 RBMY1CP0DJD4 496 aa11.4□□□□□ -0.58
RPAIN-206ENST00000539417 ICAM4Q14773 271 aa11.4□□□□□ -0.58
RPAIN-206ENST00000539417 KIR3DS1Q14943 382 aa11.4□□□□□ -0.58
RPAIN-206ENST00000539417 RBMY1FQ15415 496 aaKnown RBP11.4□□□□□ -0.58
RPAIN-206ENST00000539417 ZFAND6Q6FIF0 208 aa11.4□□□□□ -0.58
RPAIN-206ENST00000539417 C1orf158Q8N1D5 194 aa11.4□□□□□ -0.58
RPAIN-206ENST00000539417 Q8NAQ8 132 aa11.4□□□□□ -0.58
RPAIN-206ENST00000539417 TRAV12-2A0A075B6T6 113 aa11.39□□□□□ -0.59
RPAIN-206ENST00000539417 DUSP14O95147 198 aaKnown RBP11.39□□□□□ -0.59
RPAIN-206ENST00000539417 PRM2P04554 102 aa11.39□□□□□ -0.59
RPAIN-206ENST00000539417 NUTF2P61970 127 aaKnown RBP11.39□□□□□ -0.59
RPAIN-206ENST00000539417 UBE2L3P68036 154 aaKnown RBP11.39□□□□□ -0.59
RPAIN-206ENST00000539417 ERCC8Q13216 396 aa11.39□□□□□ -0.59
RPAIN-206ENST00000539417 ZNF345Q14585 488 aa11.39□□□□□ -0.59
RPAIN-206ENST00000539417 ZNF726P1Q15940 193 aa11.39□□□□□ -0.59
RPAIN-206ENST00000539417 KHDC3LQ587J8 217 aa11.39□□□□□ -0.59
RPAIN-206ENST00000539417 TMEM41BQ5BJD5 291 aa11.39□□□□□ -0.59
RPAIN-206ENST00000539417 ZNF767PQ75MW2 155 aa11.39□□□□□ -0.59
RPAIN-206ENST00000539417 IGHV4-28A0A0C4DH34 117 aa11.38□□□□□ -0.59
RPAIN-206ENST00000539417 A0A1W2PPV4 95 aa11.38□□□□□ -0.59
RPAIN-206ENST00000539417 TAAR5O14804 337 aa11.38□□□□□ -0.59
RPAIN-206ENST00000539417 CDC34P49427 236 aaPredicted RBP11.38□□□□□ -0.59
RPAIN-206ENST00000539417 RANP62826 216 aaKnown RBP11.38□□□□□ -0.59
RPAIN-206ENST00000539417 SERF2P84101 59 aa11.38□□□□□ -0.59
RPAIN-206ENST00000539417 PDE6HQ13956 83 aa11.38□□□□□ -0.59
RPAIN-206ENST00000539417 BAP18Q8IXM2 172 aa11.38□□□□□ -0.59
RPAIN-206ENST00000539417 RAB24Q969Q5 203 aa11.38□□□□□ -0.59
RPAIN-206ENST00000539417 ARPC5LQ9BPX5 153 aa11.38□□□□□ -0.59
RPAIN-206ENST00000539417 IGHV3OR16-12A0A075B7B8 117 aa11.38□□□□□ -0.59
RPAIN-206ENST00000539417 JTBO76095 146 aa11.38□□□□□ -0.59
RPAIN-206ENST00000539417 STAG3L2P0CL84 134 aa11.38□□□□□ -0.59
RPAIN-206ENST00000539417 STAG3L3P0CL85 134 aa11.38□□□□□ -0.59
RPAIN-206ENST00000539417 ARL14EPLP0DKL9 152 aa11.38□□□□□ -0.59
RPAIN-206ENST00000539417 TAS2R45P59539 299 aa11.38□□□□□ -0.59
RPAIN-206ENST00000539417 ZNF705AQ6ZN79 300 aaPredicted RBP11.38□□□□□ -0.59
RPAIN-206ENST00000539417 GNPNAT1Q96EK6 184 aaPredicted RBP11.38□□□□□ -0.59
RPAIN-206ENST00000539417 C1QTNF4Q9BXJ3 329 aa11.38□□□□□ -0.59
RPAIN-206ENST00000539417 IGKV2-40A0A087WW87 121 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-206ENST00000539417 IGKV2D-40P01614 121 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-206ENST00000539417 CT45A10P0DMU9 189 aa11.37□□□□□ -0.59
RPAIN-206ENST00000539417 LGALSLQ3ZCW2 172 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-206ENST00000539417 TMUB2Q71RG4 321 aa11.37□□□□□ -0.59
RPAIN-206ENST00000539417 IL17DQ8TAD2 202 aa11.37□□□□□ -0.59
RPAIN-206ENST00000539417 MRPL53Q96EL3 112 aaKnown RBP11.37□□□□□ -0.59
RPAIN-206ENST00000539417 Q9H3A6 140 aa11.37□□□□□ -0.59
RPAIN-206ENST00000539417 A0A0D9SG52 128 aa11.36□□□□□ -0.59
RPAIN-206ENST00000539417 NPIPB6E9PJ23 425 aa11.36□□□□□ -0.59
RPAIN-206ENST00000539417 BCL2L11O43521 198 aa11.36□□□□□ -0.59
RPAIN-206ENST00000539417 CASC10Q5T4H9 136 aa11.36□□□□□ -0.59
RPAIN-206ENST00000539417 OR10J6PQ8NGY7 276 aa11.36□□□□□ -0.59
RPAIN-206ENST00000539417 PQLC2Q6ZP29 291 aa11.35□□□□□ -0.59
RPAIN-206ENST00000539417 IGF2BP2-AS1Q96M15 143 aa11.35□□□□□ -0.59
RPAIN-206ENST00000539417 VGLL1Q99990 258 aa11.35□□□□□ -0.59
RPAIN-206ENST00000539417 AGPAT4-IT1Q9H0P7 198 aa11.35□□□□□ -0.59
RPAIN-206ENST00000539417 C11orf68Q9H3H3 251 aaKnown RBP11.35□□□□□ -0.59
RPAIN-206ENST00000539417 PRELID1Q9Y255 219 aa11.35□□□□□ -0.59
RPAIN-206ENST00000539417 SACSQ9NZJ4 4579 aa11.35□□□□□ -0.59
RPAIN-206ENST00000539417 TENM2Q9NT68 2774 aa11.34□□□□□ -0.59
RPAIN-206ENST00000539417 C3orf84H3BNL1 204 aa11.34□□□□□ -0.59
RPAIN-206ENST00000539417 J3KRW8 73 aa11.34□□□□□ -0.59
RPAIN-206ENST00000539417 MBP02144 154 aa11.34□□□□□ -0.59
RPAIN-206ENST00000539417 MIFP14174 115 aa11.34□□□□□ -0.59
RPAIN-206ENST00000539417 S100A1P23297 94 aa11.34□□□□□ -0.59
RPAIN-206ENST00000539417 GCHFRP30047 84 aa11.34□□□□□ -0.59
RPAIN-206ENST00000539417 FHITP49789 147 aa11.34□□□□□ -0.59
RPAIN-206ENST00000539417 ZNF471Q9BX82 626 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-206ENST00000539417 ACTR3CQ9C0K3 210 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-206ENST00000539417 AAMDCQ9H7C9 122 aa11.34□□□□□ -0.59
RPAIN-206ENST00000539417 CELA1Q9UNI1 258 aa11.34□□□□□ -0.59
RPAIN-206ENST00000539417 KANTRA0A1W2PQU2 76 aa11.33□□□□□ -0.6
RPAIN-206ENST00000539417 FGF8P55075 233 aaPredicted RBP11.33□□□□□ -0.6
RPAIN-206ENST00000539417 NANOS2P60321 138 aaKnown RBP11.33□□□□□ -0.6
RPAIN-206ENST00000539417 PMS2P11Q13670 270 aa11.33□□□□□ -0.6
RPAIN-206ENST00000539417 SUN5Q8TC36 379 aa11.33□□□□□ -0.6
RPAIN-206ENST00000539417 TMPRSS5Q9H3S3 457 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms