RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 HIST3H2BBQ8N257 126 aa13.52□□□□□ -0.25
SCARB1-205ENST00000538291 UBE2CO00762 179 aa13.51□□□□□ -0.25
SCARB1-205ENST00000538291 EREGO14944 169 aa13.51□□□□□ -0.25
SCARB1-205ENST00000538291 TMEM75Q8N9X5 138 aa13.51□□□□□ -0.25
SCARB1-205ENST00000538291 ARFGEF3Q5TH69 2177 aa13.51□□□□□ -0.25
SCARB1-205ENST00000538291 NDUFA4O00483 81 aa13.51□□□□□ -0.25
SCARB1-205ENST00000538291 LOXP28300 417 aaPredicted RBP13.51□□□□□ -0.25
SCARB1-205ENST00000538291 ZC2HC1BQ5TFG8 222 aa13.51□□□□□ -0.25
SCARB1-205ENST00000538291 ZNF833PQ6ZTB9 187 aa13.51□□□□□ -0.25
SCARB1-205ENST00000538291 MRPL27Q9P0M9 148 aaKnown RBP13.51□□□□□ -0.25
SCARB1-205ENST00000538291 PFN1P07737 140 aaKnown RBP13.51□□□□□ -0.25
SCARB1-205ENST00000538291 AZU1P20160 251 aa13.51□□□□□ -0.25
SCARB1-205ENST00000538291 NDUFA4L2Q9NRX3 87 aa13.51□□□□□ -0.25
SCARB1-205ENST00000538291 TMEM14BQ9NUH8 114 aa13.5□□□□□ -0.25
SCARB1-205ENST00000538291 VWC2LB2RUY7 222 aa13.5□□□□□ -0.25
SCARB1-205ENST00000538291 TNFRSF6BO95407 300 aa13.5□□□□□ -0.25
SCARB1-205ENST00000538291 HIST1H4AP62805 103 aaKnown RBP13.5□□□□□ -0.25
SCARB1-205ENST00000538291 HS3ST6Q96QI5 342 aa13.5□□□□□ -0.25
SCARB1-205ENST00000538291 KLK9Q9UKQ9 250 aa13.5□□□□□ -0.25
SCARB1-205ENST00000538291 IGHV1OR15-1A0A075B7D0 117 aa13.5□□□□□ -0.25
SCARB1-205ENST00000538291 Q6ZR03 302 aa13.5□□□□□ -0.25
SCARB1-205ENST00000538291 REG4Q9BYZ8 158 aa13.5□□□□□ -0.25
SCARB1-205ENST00000538291 ETV2O00321 342 aaPredicted RBP13.5□□□□□ -0.25
SCARB1-205ENST00000538291 LY6G6EA0A0G2JKS1 128 aa13.5□□□□□ -0.25
SCARB1-205ENST00000538291 NBL1P41271 181 aa13.5□□□□□ -0.25
SCARB1-205ENST00000538291 U3KQA8 63 aa13.5□□□□□ -0.25
SCARB1-205ENST00000538291 LRRK1Q38SD2 2015 aa13.49□□□□□ -0.25
SCARB1-205ENST00000538291 C2orf82Q6UX34 121 aa13.49□□□□□ -0.25
SCARB1-205ENST00000538291 CACNA1HO95180 2353 aa13.49□□□□□ -0.25
SCARB1-205ENST00000538291 GAGE12BA1L429 117 aa13.49□□□□□ -0.25
SCARB1-205ENST00000538291 GAGE7O76087 117 aa13.49□□□□□ -0.25
SCARB1-205ENST00000538291 GAGE12FP0CL80 117 aa13.49□□□□□ -0.25
SCARB1-205ENST00000538291 GAGE12GP0CL81 117 aa13.49□□□□□ -0.25
SCARB1-205ENST00000538291 GAGE12IP0CL82 117 aa13.49□□□□□ -0.25
SCARB1-205ENST00000538291 RMI2Q96E14 147 aa13.49□□□□□ -0.25
SCARB1-205ENST00000538291 FER1L5A0AVI2 2057 aa13.49□□□□□ -0.25
SCARB1-205ENST00000538291 IGHV3-16A0A0C4DH30 117 aa13.49□□□□□ -0.25
SCARB1-205ENST00000538291 COLCA2A8K830 154 aa13.49□□□□□ -0.25
SCARB1-205ENST00000538291 SYS1-DBNDD2H3BUS1 97 aa13.48□□□□□ -0.25
SCARB1-205ENST00000538291 SRSF4Q08170 494 aaKnown RBP13.48□□□□□ -0.25
SCARB1-205ENST00000538291 LINC00311Q8N616 119 aa13.48□□□□□ -0.25
SCARB1-205ENST00000538291 IGKV1-6A0A0C4DH72 117 aa13.48□□□□□ -0.25
SCARB1-205ENST00000538291 RPL32P62910 135 aaKnown RBP13.48□□□□□ -0.25
SCARB1-205ENST00000538291 PI4KAP42356 2102 aa13.48□□□□□ -0.25
SCARB1-205ENST00000538291 hDV102S1A0JD36 115 aa13.48□□□□□ -0.25
SCARB1-205ENST00000538291 LINC00479Q96M42 142 aa13.48□□□□□ -0.25
SCARB1-205ENST00000538291 DOCK7Q96N67 2140 aa13.48□□□□□ -0.25
SCARB1-205ENST00000538291 TEX36Q5VZQ5 186 aa13.48□□□□□ -0.25
SCARB1-205ENST00000538291 ZNF492Q9P255 531 aa13.48□□□□□ -0.25
SCARB1-205ENST00000538291 ELANEP08246 267 aa13.47□□□□□ -0.25
SCARB1-205ENST00000538291 NKAPP1Q8N9T2 125 aa13.47□□□□□ -0.25
SCARB1-205ENST00000538291 CDKN1BP46527 198 aa13.47□□□□□ -0.25
SCARB1-205ENST00000538291 PAX9P55771 341 aa13.47□□□□□ -0.25
SCARB1-205ENST00000538291 C8orf86Q6ZUL3 223 aa13.47□□□□□ -0.25
SCARB1-205ENST00000538291 DOCK10Q96BY6 2186 aa13.47□□□□□ -0.25
SCARB1-205ENST00000538291 CGB3P0DN86 165 aa13.47□□□□□ -0.25
SCARB1-205ENST00000538291 ESDP10768 282 aa13.47□□□□□ -0.25
SCARB1-205ENST00000538291 ANAPC13Q9BS18 74 aa13.47□□□□□ -0.25
SCARB1-205ENST00000538291 I3L3M4 83 aa13.47□□□□□ -0.25
SCARB1-205ENST00000538291 C3orf79P0CE67 100 aa13.47□□□□□ -0.25
SCARB1-205ENST00000538291 IGLV3-9A0A075B6K5 115 aa13.47□□□□□ -0.25
SCARB1-205ENST00000538291 TRBV19A0A075B6N1 114 aa13.47□□□□□ -0.25
SCARB1-205ENST00000538291 TP53TG1Q9Y2A0 90 aa13.47□□□□□ -0.25
SCARB1-205ENST00000538291 TMEM256Q8N2U0 113 aa13.46□□□□□ -0.25
SCARB1-205ENST00000538291 ZNF625Q96I27 306 aaPredicted RBP13.46□□□□□ -0.25
SCARB1-205ENST00000538291 ZMAT4Q9H898 229 aa13.46□□□□□ -0.25
SCARB1-205ENST00000538291 MPDZO75970 2070 aa13.46□□□□□ -0.25
SCARB1-205ENST00000538291 C17orf58Q2M2W7 97 aa13.46□□□□□ -0.25
SCARB1-205ENST00000538291 TMEM126AQ9H061 195 aa13.46□□□□□ -0.25
SCARB1-205ENST00000538291 PROK2Q9HC23 129 aa13.46□□□□□ -0.25
SCARB1-205ENST00000538291 GAGE2EQ4V326 116 aa13.46□□□□□ -0.26
SCARB1-205ENST00000538291 NEGR1Q7Z3B1 354 aa13.46□□□□□ -0.26
SCARB1-205ENST00000538291 GAGE2DQ9UEU5 116 aa13.46□□□□□ -0.26
SCARB1-205ENST00000538291 TRAV8-3A0A0A6YYJ7 113 aa13.45□□□□□ -0.26
SCARB1-205ENST00000538291 LYL1P12980 280 aa13.45□□□□□ -0.26
SCARB1-205ENST00000538291 TMEM141Q96I45 108 aa13.45□□□□□ -0.26
SCARB1-205ENST00000538291 SIGMAR1Q99720 223 aa13.45□□□□□ -0.26
SCARB1-205ENST00000538291 TMEM243Q9BU79 118 aa13.45□□□□□ -0.26
SCARB1-205ENST00000538291 DLX4Q92988 240 aaPredicted RBP13.45□□□□□ -0.26
SCARB1-205ENST00000538291 WNK2Q9Y3S1 2297 aa13.45□□□□□ -0.26
SCARB1-205ENST00000538291 PMVKQ15126 192 aa13.45□□□□□ -0.26
SCARB1-205ENST00000538291 SNHG12Q9BXW3 62 aa13.45□□□□□ -0.26
SCARB1-205ENST00000538291 PRSS46E5RG02 174 aa13.45□□□□□ -0.26
SCARB1-205ENST00000538291 IGLV1-44P01699 117 aa13.45□□□□□ -0.26
SCARB1-205ENST00000538291 FAM215AQ9Y5M1 114 aa13.45□□□□□ -0.26
SCARB1-205ENST00000538291 NOTCH3Q9UM47 2321 aa13.44□□□□□ -0.26
SCARB1-205ENST00000538291 FAM231BA6NCW3 169 aa13.44□□□□□ -0.26
SCARB1-205ENST00000538291 ZNRF2Q8NHG8 242 aa13.44□□□□□ -0.26
SCARB1-205ENST00000538291 NAA38Q9BRA0 125 aaKnown RBP13.44□□□□□ -0.26
SCARB1-205ENST00000538291 DUX4L9Q6RFH8 374 aaPredicted RBP13.44□□□□□ -0.26
SCARB1-205ENST00000538291 C8orf49Q96NF6 230 aa13.44□□□□□ -0.26
SCARB1-205ENST00000538291 CHAC1Q9BUX1 264 aa13.44□□□□□ -0.26
SCARB1-205ENST00000538291 TMEM213A2RRL7 107 aa13.44□□□□□ -0.26
SCARB1-205ENST00000538291 CGB7P0DN87 165 aa13.44□□□□□ -0.26
SCARB1-205ENST00000538291 FHL1Q13642 323 aa13.44□□□□□ -0.26
SCARB1-205ENST00000538291 VWC2Q2TAL6 325 aa13.44□□□□□ -0.26
SCARB1-205ENST00000538291 GAGE2BQ13066 116 aa13.44□□□□□ -0.26
SCARB1-205ENST00000538291 C2orf66Q6UXQ4 117 aa13.44□□□□□ -0.26
SCARB1-205ENST00000538291 CREBBPQ92793 2442 aa13.44□□□□□ -0.26
SCARB1-205ENST00000538291 ZNF48Q96MX3 618 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms