RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 ZNF331Q9NQX6 463 aaPredicted RBP7.42□□□□□ -1.22
CLPB-208ENST00000538021 MRPL16Q9NX20 251 aaKnown RBP7.42□□□□□ -1.22
CLPB-208ENST00000538021 GPR132Q9UNW8 380 aa7.42□□□□□ -1.22
CLPB-208ENST00000538021 TRGV4A0A0C4DH28 118 aa7.41□□□□□ -1.22
CLPB-208ENST00000538021 DISC1C4P0D8 188 aa7.41□□□□□ -1.22
CLPB-208ENST00000538021 H3BTX0 84 aa7.41□□□□□ -1.22
CLPB-208ENST00000538021 GYPEP15421 78 aa7.41□□□□□ -1.22
CLPB-208ENST00000538021 RPP30P78346 268 aaKnown RBP7.41□□□□□ -1.22
CLPB-208ENST00000538021 TEPPQ6URK8 271 aa7.41□□□□□ -1.22
CLPB-208ENST00000538021 S100A7AQ86SG5 101 aa7.41□□□□□ -1.22
CLPB-208ENST00000538021 EIF4E3Q8N5X7 224 aaKnown RBP7.41□□□□□ -1.22
CLPB-208ENST00000538021 IGHV3-38A0A0C4DH36 116 aa7.4□□□□□ -1.22
CLPB-208ENST00000538021 PRSS46E5RG02 174 aa7.4□□□□□ -1.22
CLPB-208ENST00000538021 MRPS12O15235 138 aaKnown RBP7.4□□□□□ -1.22
CLPB-208ENST00000538021 CXCL2P19875 107 aa7.4□□□□□ -1.22
CLPB-208ENST00000538021 TCL1AP56279 114 aa7.4□□□□□ -1.22
CLPB-208ENST00000538021 SPANXN5Q5MJ07 72 aa7.4□□□□□ -1.22
CLPB-208ENST00000538021 ACOT7LQ6ZUV0 252 aa7.4□□□□□ -1.22
CLPB-208ENST00000538021 VGLL1Q99990 258 aa7.4□□□□□ -1.22
CLPB-208ENST00000538021 MRPL32Q9BYC8 188 aaKnown RBP7.4□□□□□ -1.22
CLPB-208ENST00000538021 ARL6Q9H0F7 186 aa7.4□□□□□ -1.22
CLPB-208ENST00000538021 EXTL2Q9UBQ6 330 aa7.4□□□□□ -1.22
CLPB-208ENST00000538021 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.39□□□□□ -1.23
CLPB-208ENST00000538021 C7orf71A4D174 169 aa7.39□□□□□ -1.23
CLPB-208ENST00000538021 H3BP45 60 aa7.39□□□□□ -1.23
CLPB-208ENST00000538021 WRBO00258 174 aa7.39□□□□□ -1.23
CLPB-208ENST00000538021 SLC17A3O00476 420 aa7.39□□□□□ -1.23
CLPB-208ENST00000538021 RS1O15537 224 aa7.39□□□□□ -1.23
CLPB-208ENST00000538021 MED6O75586 246 aa7.39□□□□□ -1.23
CLPB-208ENST00000538021 SLC25A5P05141 298 aaKnown RBP7.39□□□□□ -1.23
CLPB-208ENST00000538021 PLP1P60201 277 aa7.39□□□□□ -1.23
CLPB-208ENST00000538021 BTN1A1Q13410 526 aa7.39□□□□□ -1.23
CLPB-208ENST00000538021 WFDC2Q14508 124 aa7.39□□□□□ -1.23
CLPB-208ENST00000538021 ANXA2RQ3ZCQ2 193 aa7.39□□□□□ -1.23
CLPB-208ENST00000538021 LINC01620Q4KN68 170 aa7.39□□□□□ -1.23
CLPB-208ENST00000538021 ODF3Q96PU9 254 aa7.39□□□□□ -1.23
CLPB-208ENST00000538021 CIB3Q96Q77 187 aaPredicted RBP7.39□□□□□ -1.23
CLPB-208ENST00000538021 TXNDC17Q9BRA2 123 aa7.39□□□□□ -1.23
CLPB-208ENST00000538021 ARV1Q9H2C2 271 aa7.39□□□□□ -1.23
CLPB-208ENST00000538021 TP53TG3Q9ULZ0 132 aa7.39□□□□□ -1.23
CLPB-208ENST00000538021 IBA57-AS1B1ANH7 110 aa7.38□□□□□ -1.23
CLPB-208ENST00000538021 PITX3O75364 302 aa7.38□□□□□ -1.23
CLPB-208ENST00000538021 SFTA3P0C7M3 94 aa7.38□□□□□ -1.23
CLPB-208ENST00000538021 ANXA3P12429 323 aa7.38□□□□□ -1.23
CLPB-208ENST00000538021 RNASE4P34096 147 aaKnown RBP7.38□□□□□ -1.23
CLPB-208ENST00000538021 CD300CQ08708 224 aa7.38□□□□□ -1.23
CLPB-208ENST00000538021 PATE2Q6UY27 113 aa7.38□□□□□ -1.23
CLPB-208ENST00000538021 RNF24Q9Y225 148 aa7.38□□□□□ -1.23
CLPB-208ENST00000538021 RGS13O14921 159 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 LECT2O14960 151 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 SYNGR2O43760 224 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 MPDU1O75352 247 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 ORM1P02763 201 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 NCS1P62166 190 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 SELENOTP62341 195 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 SRPXP78539 464 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 LINC01556Q5JQF7 62 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 IBA57Q5T440 356 aaKnown RBP7.37□□□□□ -1.23
CLPB-208ENST00000538021 MZT2AQ6P582 158 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 LINC00305Q7Z4B0 112 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 BPIFA4PQ86YQ2 179 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 OR51S1Q8NGJ8 323 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 C15orf40Q8WUR7 153 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 BLNKQ8WV28 456 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 YIPF6Q96EC8 236 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 PRRT1Q99946 306 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 ARPC5LQ9BPX5 153 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 CHAC1Q9BUX1 264 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 Q9H521 79 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 DNAJC4Q9NNZ3 241 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 PXMP4Q9Y6I8 212 aa7.37□□□□□ -1.23
CLPB-208ENST00000538021 IGHV3-30P01768 117 aa7.36□□□□□ -1.23
CLPB-208ENST00000538021 IGHV3-33P01772 117 aa7.36□□□□□ -1.23
CLPB-208ENST00000538021 IGHV3-30-3P0DP02 117 aa7.36□□□□□ -1.23
CLPB-208ENST00000538021 IGHV3-30-5P0DP03 117 aa7.36□□□□□ -1.23
CLPB-208ENST00000538021 PPT1P50897 306 aa7.36□□□□□ -1.23
CLPB-208ENST00000538021 ERCC8Q13216 396 aa7.36□□□□□ -1.23
CLPB-208ENST00000538021 CLVS1Q8IUQ0 354 aaPredicted RBP7.36□□□□□ -1.23
CLPB-208ENST00000538021 CIRBP-AS1Q8TBR5 109 aa7.36□□□□□ -1.23
CLPB-208ENST00000538021 ZNF479Q96JC4 524 aa7.36□□□□□ -1.23
CLPB-208ENST00000538021 SCGB3A2Q96PL1 93 aa7.36□□□□□ -1.23
CLPB-208ENST00000538021 TM2D2Q9BX73 214 aa7.36□□□□□ -1.23
CLPB-208ENST00000538021 SLC25A31Q9H0C2 315 aa7.36□□□□□ -1.23
CLPB-208ENST00000538021 STRAPQ9Y3F4 350 aaKnown RBP7.36□□□□□ -1.23
CLPB-208ENST00000538021 KLLNB2CW77 178 aa7.35□□□□□ -1.23
CLPB-208ENST00000538021 C9JCJ5 164 aa7.35□□□□□ -1.23
CLPB-208ENST00000538021 IGLV2-8P01709 118 aa7.35□□□□□ -1.23
CLPB-208ENST00000538021 GPX1P07203 203 aa7.35□□□□□ -1.23
CLPB-208ENST00000538021 AKAIN1P0CW23 69 aa7.35□□□□□ -1.23
CLPB-208ENST00000538021 TNFSF8P32971 234 aa7.35□□□□□ -1.23
CLPB-208ENST00000538021 ASIPP42127 132 aa7.35□□□□□ -1.23
CLPB-208ENST00000538021 VBP1P61758 197 aa7.35□□□□□ -1.23
CLPB-208ENST00000538021 RRAS2P62070 204 aaPredicted RBP7.35□□□□□ -1.23
CLPB-208ENST00000538021 SSBP1Q04837 148 aaKnown RBP7.35□□□□□ -1.23
CLPB-208ENST00000538021 SLC38A11Q08AI6 406 aa7.35□□□□□ -1.23
CLPB-208ENST00000538021 OR10J3Q5JRS4 329 aa7.35□□□□□ -1.23
CLPB-208ENST00000538021 NHLRC2Q8NBF2 726 aa7.35□□□□□ -1.23
CLPB-208ENST00000538021 IGHV1OR15-1A0A075B7D0 117 aa7.34□□□□□ -1.23
CLPB-208ENST00000538021 TRAV8-6A0A0B4J262 113 aa7.34□□□□□ -1.23
CLPB-208ENST00000538021 LOC100131303A0A0U1RQF7 123 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms