RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 FXYD7P58549 80 aa16.91■□□□□ 0.3
TRIM3-214ENST00000536344 WT1-ASQ06250 92 aa16.91■□□□□ 0.3
TRIM3-214ENST00000536344 HCP5Q6MZN7 132 aa16.91■□□□□ 0.3
TRIM3-214ENST00000536344 NBPF19A0A087WUL8 3843 aa16.91■□□□□ 0.3
TRIM3-214ENST00000536344 IGHV3-21A0A0B4J1V1 117 aa16.91■□□□□ 0.3
TRIM3-214ENST00000536344 MOSP00540 346 aa16.91■□□□□ 0.3
TRIM3-214ENST00000536344 OR5AL1P0C617 328 aa16.91■□□□□ 0.3
TRIM3-214ENST00000536344 PAXXQ9BUH6 204 aa16.91■□□□□ 0.3
TRIM3-214ENST00000536344 FBXL15Q9H469 300 aa16.91■□□□□ 0.3
TRIM3-214ENST00000536344 IGHV4-39P01824 125 aa16.9■□□□□ 0.3
TRIM3-214ENST00000536344 C8orf31Q8N9H6 132 aa16.9■□□□□ 0.3
TRIM3-214ENST00000536344 C8orf46Q8TAG6 207 aa16.9■□□□□ 0.3
TRIM3-214ENST00000536344 NDUFA4L2Q9NRX3 87 aa16.9■□□□□ 0.3
TRIM3-214ENST00000536344 CSPG4Q6UVK1 2322 aa16.9■□□□□ 0.3
TRIM3-214ENST00000536344 MRGPRG-AS1Q2M3A8 158 aa16.9■□□□□ 0.3
TRIM3-214ENST00000536344 PATE2Q6UY27 113 aa16.9■□□□□ 0.3
TRIM3-214ENST00000536344 VMO1Q7Z5L0 202 aa16.9■□□□□ 0.3
TRIM3-214ENST00000536344 RPP21Q9H633 154 aaKnown RBP16.9■□□□□ 0.3
TRIM3-214ENST00000536344 OR1L8Q8NGR8 309 aa16.89■□□□□ 0.29
TRIM3-214ENST00000536344 ZNF747Q9BV97 191 aa16.89■□□□□ 0.29
TRIM3-214ENST00000536344 LOXL1Q08397 574 aaPredicted RBP16.89■□□□□ 0.29
TRIM3-214ENST00000536344 OR8A1Q8NGG7 326 aa16.89■□□□□ 0.29
TRIM3-214ENST00000536344 ZNF257Q9Y2Q1 563 aa16.89■□□□□ 0.29
TRIM3-214ENST00000536344 CHEK1O14757 476 aa16.88■□□□□ 0.29
TRIM3-214ENST00000536344 APOHP02749 345 aaPredicted RBP16.88■□□□□ 0.29
TRIM3-214ENST00000536344 RNASE2P10153 161 aaKnown RBP16.88■□□□□ 0.29
TRIM3-214ENST00000536344 MC5RP33032 325 aa16.88■□□□□ 0.29
TRIM3-214ENST00000536344 FAM162BQ5T6X4 162 aa16.88■□□□□ 0.29
TRIM3-214ENST00000536344 DYNAPQ8N1N2 210 aa16.88■□□□□ 0.29
TRIM3-214ENST00000536344 VSTM2AQ8TAG5 236 aa16.88■□□□□ 0.29
TRIM3-214ENST00000536344 TMEM167AQ8TBQ9 72 aa16.88■□□□□ 0.29
TRIM3-214ENST00000536344 HSPB8Q9UJY1 196 aa16.88■□□□□ 0.29
TRIM3-214ENST00000536344 A0A1W2PPM0 123 aa16.88■□□□□ 0.29
TRIM3-214ENST00000536344 VMA21Q3ZAQ7 101 aa16.88■□□□□ 0.29
TRIM3-214ENST00000536344 ASCL2Q99929 193 aa16.88■□□□□ 0.29
TRIM3-214ENST00000536344 A0A1W2PPI3 338 aa16.87■□□□□ 0.29
TRIM3-214ENST00000536344 A6NDN8 102 aa16.87■□□□□ 0.29
TRIM3-214ENST00000536344 FSTL3O95633 263 aa16.87■□□□□ 0.29
TRIM3-214ENST00000536344 SLC25A5P05141 298 aaKnown RBP16.87■□□□□ 0.29
TRIM3-214ENST00000536344 BMI1P35226 326 aa16.87■□□□□ 0.29
TRIM3-214ENST00000536344 HES1Q14469 280 aa16.87■□□□□ 0.29
TRIM3-214ENST00000536344 PLGLAQ15195 96 aa16.87■□□□□ 0.29
TRIM3-214ENST00000536344 RUSC1-AS1Q66K80 236 aa16.87■□□□□ 0.29
TRIM3-214ENST00000536344 F11RQ9Y624 299 aaKnown RBP16.87■□□□□ 0.29
TRIM3-214ENST00000536344 FXYD5Q96DB9 178 aa16.87■□□□□ 0.29
TRIM3-214ENST00000536344 IGHV3OR16-10A0A075B7F0 116 aa16.86■□□□□ 0.29
TRIM3-214ENST00000536344 PGPA6NDG6 321 aa16.86■□□□□ 0.29
TRIM3-214ENST00000536344 PCP2Q8IVA1 136 aa16.86■□□□□ 0.29
TRIM3-214ENST00000536344 ZNF843Q8N446 348 aa16.86■□□□□ 0.29
TRIM3-214ENST00000536344 C18orf15Q96N68 181 aa16.86■□□□□ 0.29
TRIM3-214ENST00000536344 K7EMI3 77 aa16.85■□□□□ 0.29
TRIM3-214ENST00000536344 COX7A2P2O60397 106 aa16.85■□□□□ 0.29
TRIM3-214ENST00000536344 P01737 135 aa16.85■□□□□ 0.29
TRIM3-214ENST00000536344 CCL19Q99731 98 aa16.85■□□□□ 0.29
TRIM3-214ENST00000536344 NDFIP1Q9BT67 221 aa16.85■□□□□ 0.29
TRIM3-214ENST00000536344 TENM4Q6N022 2769 aa16.85■□□□□ 0.29
TRIM3-214ENST00000536344 TRAV8-1A0A0A6YYK1 113 aa16.85■□□□□ 0.29
TRIM3-214ENST00000536344 LY6LH3BQJ8 138 aa16.85■□□□□ 0.29
TRIM3-214ENST00000536344 PRSS22Q9GZN4 317 aa16.85■□□□□ 0.29
TRIM3-214ENST00000536344 EPDR1Q9UM22 224 aa16.85■□□□□ 0.29
TRIM3-214ENST00000536344 A8MWL6 223 aa16.84■□□□□ 0.29
TRIM3-214ENST00000536344 ERHP84090 104 aaKnown RBP16.84■□□□□ 0.29
TRIM3-214ENST00000536344 MLST8Q9BVC4 326 aa16.84■□□□□ 0.29
TRIM3-214ENST00000536344 AP5S1Q9NUS5 200 aa16.84■□□□□ 0.29
TRIM3-214ENST00000536344 MRPL36Q9P0J6 103 aaKnown RBP16.84■□□□□ 0.29
TRIM3-214ENST00000536344 DPM3Q9P2X0 92 aa16.84■□□□□ 0.29
TRIM3-214ENST00000536344 SIGLEC9Q9Y336 463 aa16.84■□□□□ 0.29
TRIM3-214ENST00000536344 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.84■□□□□ 0.29
TRIM3-214ENST00000536344 ADAMTSL5Q6ZMM2 481 aa16.84■□□□□ 0.29
TRIM3-214ENST00000536344 PRTN3P24158 256 aa16.83■□□□□ 0.29
TRIM3-214ENST00000536344 COL8A1P27658 744 aa16.83■□□□□ 0.29
TRIM3-214ENST00000536344 CD69Q07108 199 aa16.83■□□□□ 0.29
TRIM3-214ENST00000536344 C10orf113Q5VZT2 155 aa16.83■□□□□ 0.29
TRIM3-214ENST00000536344 GPR82Q96P67 336 aa16.83■□□□□ 0.29
TRIM3-214ENST00000536344 TSSC4Q9Y5U2 329 aaPredicted RBP16.83■□□□□ 0.29
TRIM3-214ENST00000536344 FCGR2BP31994 310 aaPredicted RBP16.83■□□□□ 0.28
TRIM3-214ENST00000536344 LMO4P61968 165 aa16.83■□□□□ 0.28
TRIM3-214ENST00000536344 DOPEY2Q9Y3R5 2298 aa16.83■□□□□ 0.28
TRIM3-214ENST00000536344 A0A096LNJ9 63 aa16.83■□□□□ 0.28
TRIM3-214ENST00000536344 OVOL3O00110 214 aa16.83■□□□□ 0.28
TRIM3-214ENST00000536344 RBPMS2Q6ZRY4 209 aaKnown RBP16.83■□□□□ 0.28
TRIM3-214ENST00000536344 PPP1R27Q86WC6 154 aa16.83■□□□□ 0.28
TRIM3-214ENST00000536344 C19orf24Q9BVV8 132 aa16.83■□□□□ 0.28
TRIM3-214ENST00000536344 MRPL32Q9BYC8 188 aaKnown RBP16.83■□□□□ 0.28
TRIM3-214ENST00000536344 NAV2Q8IVL1 2488 aa16.82■□□□□ 0.28
TRIM3-214ENST00000536344 LOC389332A0A1B0GUA5 103 aa16.82■□□□□ 0.28
TRIM3-214ENST00000536344 HSD52Q0P140 79 aa16.82■□□□□ 0.28
TRIM3-214ENST00000536344 BOD1L2Q8IYS8 172 aa16.82■□□□□ 0.28
TRIM3-214ENST00000536344 CIARTQ8N365 385 aaPredicted RBP16.82■□□□□ 0.28
TRIM3-214ENST00000536344 C19orf71A6NCJ1 209 aa16.82■□□□□ 0.28
TRIM3-214ENST00000536344 K7ERJ3 54 aa16.82■□□□□ 0.28
TRIM3-214ENST00000536344 RBP4P02753 201 aa16.82■□□□□ 0.28
TRIM3-214ENST00000536344 MYCNOSP40205 109 aa16.82■□□□□ 0.28
TRIM3-214ENST00000536344 SIGMAR1Q99720 223 aa16.82■□□□□ 0.28
TRIM3-214ENST00000536344 TTTY13Q9BZ97 58 aa16.82■□□□□ 0.28
TRIM3-214ENST00000536344 HOXB4P17483 251 aaPredicted RBP16.81■□□□□ 0.28
TRIM3-214ENST00000536344 NMUP48645 174 aa16.81■□□□□ 0.28
TRIM3-214ENST00000536344 SRSF1Q07955 248 aaKnown RBP eCLIP16.81■□□□□ 0.28
TRIM3-214ENST00000536344 C2orf83Q53S99 150 aa16.81■□□□□ 0.28
TRIM3-214ENST00000536344 LINC00305Q7Z4B0 112 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms