RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 GNG13Q9P2W3 67 aa12.1□□□□□ -0.47
VAMP1-205ENST00000535927 PDE6DO43924 150 aa12.09□□□□□ -0.47
VAMP1-205ENST00000535927 PAGE4O60829 102 aa12.09□□□□□ -0.47
VAMP1-205ENST00000535927 EIF3GO75821 320 aaKnown RBP eCLIP12.09□□□□□ -0.47
VAMP1-205ENST00000535927 S100A9P06702 114 aaKnown RBP12.09□□□□□ -0.47
VAMP1-205ENST00000535927 ZNF688P0C7X2 276 aa12.09□□□□□ -0.47
VAMP1-205ENST00000535927 BCL2P10415 239 aa12.09□□□□□ -0.47
VAMP1-205ENST00000535927 CD81P60033 236 aa12.09□□□□□ -0.47
VAMP1-205ENST00000535927 CCL20P78556 96 aa12.09□□□□□ -0.47
VAMP1-205ENST00000535927 PSMG4Q5JS54 123 aa12.09□□□□□ -0.47
VAMP1-205ENST00000535927 CST9LP1Q5W188 147 aa12.09□□□□□ -0.47
VAMP1-205ENST00000535927 CCDC28AQ8IWP9 274 aa12.09□□□□□ -0.47
VAMP1-205ENST00000535927 ZNF738Q8NE65 137 aa12.09□□□□□ -0.47
VAMP1-205ENST00000535927 FAM210AQ96ND0 272 aa12.09□□□□□ -0.47
VAMP1-205ENST00000535927 MAP6D1Q9H9H5 199 aa12.09□□□□□ -0.47
VAMP1-205ENST00000535927 PPP1R14DQ9NXH3 145 aa12.09□□□□□ -0.47
VAMP1-205ENST00000535927 EPDR1Q9UM22 224 aa12.09□□□□□ -0.47
VAMP1-205ENST00000535927 NOTCH1P46531 2555 aa12.08□□□□□ -0.48
VAMP1-205ENST00000535927 RBFOX3A6NFN3 312 aa12.08□□□□□ -0.48
VAMP1-205ENST00000535927 A8MZ25 164 aa12.08□□□□□ -0.48
VAMP1-205ENST00000535927 G3V4G9 280 aa12.08□□□□□ -0.48
VAMP1-205ENST00000535927 DEFB131AP59861 70 aa12.08□□□□□ -0.48
VAMP1-205ENST00000535927 MEF2BQ02080 365 aaPredicted RBP12.08□□□□□ -0.48
VAMP1-205ENST00000535927 ODF3L2Q3SX64 289 aa12.08□□□□□ -0.48
VAMP1-205ENST00000535927 ZNF506Q5JVG8 444 aa12.08□□□□□ -0.48
VAMP1-205ENST00000535927 EXOC3-AS1Q8N2X6 119 aa12.08□□□□□ -0.48
VAMP1-205ENST00000535927 OR10J6PQ8NGY7 276 aa12.08□□□□□ -0.48
VAMP1-205ENST00000535927 LINC00477Q96M19 166 aa12.08□□□□□ -0.48
VAMP1-205ENST00000535927 SAV1Q9H4B6 383 aaPredicted RBP12.08□□□□□ -0.48
VAMP1-205ENST00000535927 C19orf73Q9NVV2 129 aa12.08□□□□□ -0.48
VAMP1-205ENST00000535927 TRBV7-9A0A0J9YWB2 115 aa12.07□□□□□ -0.48
VAMP1-205ENST00000535927 RAB19A4D1S5 217 aa12.07□□□□□ -0.48
VAMP1-205ENST00000535927 DIRC3C9JPN6 131 aa12.07□□□□□ -0.48
VAMP1-205ENST00000535927 C11orf94C9JXX5 98 aa12.07□□□□□ -0.48
VAMP1-205ENST00000535927 H3BTX0 84 aa12.07□□□□□ -0.48
VAMP1-205ENST00000535927 PEA15Q15121 130 aa12.07□□□□□ -0.48
VAMP1-205ENST00000535927 ATG101Q9BSB4 218 aa12.07□□□□□ -0.48
VAMP1-205ENST00000535927 YTHDF2Q9Y5A9 579 aaKnown RBP12.07□□□□□ -0.48
VAMP1-205ENST00000535927 LENEPQ9Y5L5 61 aa12.07□□□□□ -0.48
VAMP1-205ENST00000535927 LOC102723971A0A1B0GUV8 181 aa12.06□□□□□ -0.48
VAMP1-205ENST00000535927 A0A1B0GV50 99 aa12.06□□□□□ -0.48
VAMP1-205ENST00000535927 GGTLC3B5MD39 225 aa12.06□□□□□ -0.48
VAMP1-205ENST00000535927 TMEM250H0YL14 139 aa12.06□□□□□ -0.48
VAMP1-205ENST00000535927 SNRPCP09234 159 aaKnown RBP12.06□□□□□ -0.48
VAMP1-205ENST00000535927 CD7P09564 240 aa12.06□□□□□ -0.48
VAMP1-205ENST00000535927 HLA-DRB4P13762 266 aa12.06□□□□□ -0.48
VAMP1-205ENST00000535927 KRTAP10-11P60412 298 aa12.06□□□□□ -0.48
VAMP1-205ENST00000535927 UBE2G2P60604 165 aa12.06□□□□□ -0.48
VAMP1-205ENST00000535927 C9orf47Q6ZRZ4 202 aa12.06□□□□□ -0.48
VAMP1-205ENST00000535927 Q8N1Y9 231 aa12.06□□□□□ -0.48
VAMP1-205ENST00000535927 OR8A1Q8NGG7 326 aa12.06□□□□□ -0.48
VAMP1-205ENST00000535927 C20orf173Q96LM9 149 aa12.06□□□□□ -0.48
VAMP1-205ENST00000535927 SELENOKQ9Y6D0 94 aa12.06□□□□□ -0.48
VAMP1-205ENST00000535927 HLA-DRB4X5D2U9 266 aa12.06□□□□□ -0.48
VAMP1-205ENST00000535927 A0A0J9YX75 114 aa12.05□□□□□ -0.48
VAMP1-205ENST00000535927 A8MTW9 85 aa12.05□□□□□ -0.48
VAMP1-205ENST00000535927 TCRAP04437 139 aa12.05□□□□□ -0.48
VAMP1-205ENST00000535927 NUTF2P61970 127 aaKnown RBP12.05□□□□□ -0.48
VAMP1-205ENST00000535927 FAM24BQ8N5W8 94 aa12.05□□□□□ -0.48
VAMP1-205ENST00000535927 RNF182Q8N6D2 247 aa12.05□□□□□ -0.48
VAMP1-205ENST00000535927 CYB561D1Q8N8Q1 229 aa12.05□□□□□ -0.48
VAMP1-205ENST00000535927 ODF3Q96PU9 254 aa12.05□□□□□ -0.48
VAMP1-205ENST00000535927 EIF5A2Q9GZV4 153 aaKnown RBP12.05□□□□□ -0.48
VAMP1-205ENST00000535927 TRBV6-1A0A0K0K1D8 114 aa12.04□□□□□ -0.48
VAMP1-205ENST00000535927 HAGHQ16775 308 aa12.04□□□□□ -0.48
VAMP1-205ENST00000535927 STHQ8IWL8 128 aa12.04□□□□□ -0.48
VAMP1-205ENST00000535927 C11orf52Q96A22 123 aa12.04□□□□□ -0.48
VAMP1-205ENST00000535927 KLF12Q9Y4X4 402 aa12.04□□□□□ -0.48
VAMP1-205ENST00000535927 NPIPB6E9PJ23 425 aa12.03□□□□□ -0.48
VAMP1-205ENST00000535927 H3BMM0 161 aa12.03□□□□□ -0.48
VAMP1-205ENST00000535927 M0R3E3 92 aa12.03□□□□□ -0.48
VAMP1-205ENST00000535927 PEX7O00628 323 aa12.03□□□□□ -0.48
VAMP1-205ENST00000535927 AMBPP02760 352 aa12.03□□□□□ -0.48
VAMP1-205ENST00000535927 TMEM78Q5T7P6 136 aa12.03□□□□□ -0.48
VAMP1-205ENST00000535927 IGFL4Q6B9Z1 124 aa12.03□□□□□ -0.48
VAMP1-205ENST00000535927 MORN3Q6PF18 240 aaPredicted RBP12.03□□□□□ -0.48
VAMP1-205ENST00000535927 UQCC3Q6UW78 93 aa12.03□□□□□ -0.48
VAMP1-205ENST00000535927 TMEM75Q8N9X5 138 aa12.03□□□□□ -0.48
VAMP1-205ENST00000535927 KIR2DL5BA0A0G2JN68 375 aa12.02□□□□□ -0.49
VAMP1-205ENST00000535927 KIR2DL5BA0A0G2JPC4 375 aa12.02□□□□□ -0.49
VAMP1-205ENST00000535927 LINC00862A6NCI5 91 aa12.02□□□□□ -0.49
VAMP1-205ENST00000535927 ZNF705FA8MVS1 300 aaPredicted RBP12.02□□□□□ -0.49
VAMP1-205ENST00000535927 HLA-DMBP28068 263 aa12.02□□□□□ -0.49
VAMP1-205ENST00000535927 TSPOP30536 169 aa12.02□□□□□ -0.49
VAMP1-205ENST00000535927 CNN1P51911 297 aaKnown RBP12.02□□□□□ -0.49
VAMP1-205ENST00000535927 TAS2R60P59551 318 aa12.02□□□□□ -0.49
VAMP1-205ENST00000535927 SAPCD1Q5SSQ6 148 aa12.02□□□□□ -0.49
VAMP1-205ENST00000535927 KIR2DL5AQ8N109 375 aa12.02□□□□□ -0.49
VAMP1-205ENST00000535927 EIF4E3Q8N5X7 224 aaKnown RBP12.02□□□□□ -0.49
VAMP1-205ENST00000535927 KIR2DL5BQ8NHK3 375 aa12.02□□□□□ -0.49
VAMP1-205ENST00000535927 FMC1Q96HJ9 113 aa12.02□□□□□ -0.49
VAMP1-205ENST00000535927 TUBA4BQ9H853 241 aa12.02□□□□□ -0.49
VAMP1-205ENST00000535927 ZFP30Q9Y2G7 519 aa12.02□□□□□ -0.49
VAMP1-205ENST00000535927 ATP5G3P48201 142 aa12.01□□□□□ -0.49
VAMP1-205ENST00000535927 TMEM183BQ1AE95 376 aa12.01□□□□□ -0.49
VAMP1-205ENST00000535927 TOR2AQ5JU69 321 aa12.01□□□□□ -0.49
VAMP1-205ENST00000535927 ACTL10Q5JWF8 245 aa12.01□□□□□ -0.49
VAMP1-205ENST00000535927 PRR25Q96S07 402 aa12.01□□□□□ -0.49
VAMP1-205ENST00000535927 UBE2CO00762 179 aa12□□□□□ -0.49
VAMP1-205ENST00000535927 AKR1C3P42330 323 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 250.4 ms