RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 RBPMS2Q6ZRY4 209 aaKnown RBP17.29■□□□□ 0.36
RBFOX1-206ENST00000535565 SVBPQ8N300 66 aa17.29■□□□□ 0.36
RBFOX1-206ENST00000535565 GBGT1Q8N5D6 347 aa17.29■□□□□ 0.36
RBFOX1-206ENST00000535565 MRPL53Q96EL3 112 aaKnown RBP17.29■□□□□ 0.36
RBFOX1-206ENST00000535565 ZNF747Q9BV97 191 aa17.29■□□□□ 0.36
RBFOX1-206ENST00000535565 ATRQ13535 2644 aa17.29■□□□□ 0.36
RBFOX1-206ENST00000535565 SERTM2A0A1B0GWG4 89 aa17.28■□□□□ 0.36
RBFOX1-206ENST00000535565 DIRC3C9JPN6 131 aa17.28■□□□□ 0.36
RBFOX1-206ENST00000535565 UBE2G1P62253 170 aa17.28■□□□□ 0.36
RBFOX1-206ENST00000535565 RNF182Q8N6D2 247 aa17.28■□□□□ 0.36
RBFOX1-206ENST00000535565 S100A9P06702 114 aaKnown RBP17.28■□□□□ 0.36
RBFOX1-206ENST00000535565 HLA-DMBP28068 263 aa17.28■□□□□ 0.36
RBFOX1-206ENST00000535565 GOLT1AQ6ZVE7 132 aa17.28■□□□□ 0.36
RBFOX1-206ENST00000535565 C3orf56Q8N813 242 aa17.28■□□□□ 0.36
RBFOX1-206ENST00000535565 DCANP1Q8TF63 244 aa17.28■□□□□ 0.36
RBFOX1-206ENST00000535565 NAT8Q9UHE5 227 aa17.28■□□□□ 0.36
RBFOX1-206ENST00000535565 TMEM241Q24JQ0 296 aa17.27■□□□□ 0.35
RBFOX1-206ENST00000535565 DEFB114Q30KQ6 69 aa17.27■□□□□ 0.35
RBFOX1-206ENST00000535565 LCN12Q6JVE5 192 aa17.27■□□□□ 0.35
RBFOX1-206ENST00000535565 C12orf54Q6X4T0 127 aa17.27■□□□□ 0.35
RBFOX1-206ENST00000535565 WFDC3Q8IUB2 231 aa17.27■□□□□ 0.35
RBFOX1-206ENST00000535565 LINC00482Q8N8I6 264 aa17.27■□□□□ 0.35
RBFOX1-206ENST00000535565 FMC1Q96HJ9 113 aa17.27■□□□□ 0.35
RBFOX1-206ENST00000535565 SAP30O75446 220 aa17.26■□□□□ 0.35
RBFOX1-206ENST00000535565 TAS2R60P59551 318 aa17.26■□□□□ 0.35
RBFOX1-206ENST00000535565 PSG3Q16557 428 aa17.26■□□□□ 0.35
RBFOX1-206ENST00000535565 GUCA2BQ16661 112 aa17.26■□□□□ 0.35
RBFOX1-206ENST00000535565 TMEM183BQ1AE95 376 aa17.26■□□□□ 0.35
RBFOX1-206ENST00000535565 TVP23CQ96ET8 276 aa17.26■□□□□ 0.35
RBFOX1-206ENST00000535565 TENM1Q9UKZ4 2725 aa17.26■□□□□ 0.35
RBFOX1-206ENST00000535565 C9JCJ5 164 aa17.25■□□□□ 0.35
RBFOX1-206ENST00000535565 TFPI2P48307 235 aa17.25■□□□□ 0.35
RBFOX1-206ENST00000535565 PNRC1Q12796 327 aaPredicted RBP17.25■□□□□ 0.35
RBFOX1-206ENST00000535565 LINC00479Q96M42 142 aa17.25■□□□□ 0.35
RBFOX1-206ENST00000535565 KLF12Q9Y4X4 402 aa17.25■□□□□ 0.35
RBFOX1-206ENST00000535565 TRAV34A0A0B4J273 112 aa17.24■□□□□ 0.35
RBFOX1-206ENST00000535565 TRAV25A0A0B4J276 109 aa17.24■□□□□ 0.35
RBFOX1-206ENST00000535565 ZNF705FA8MVS1 300 aaPredicted RBP17.24■□□□□ 0.35
RBFOX1-206ENST00000535565 TSPAN4O14817 238 aa17.24■□□□□ 0.35
RBFOX1-206ENST00000535565 SNAPINO95295 136 aa17.24■□□□□ 0.35
RBFOX1-206ENST00000535565 GNG4P50150 75 aa17.24■□□□□ 0.35
RBFOX1-206ENST00000535565 TMEM61Q8N0U2 210 aa17.24■□□□□ 0.35
RBFOX1-206ENST00000535565 TMEM75Q8N9X5 138 aa17.24■□□□□ 0.35
RBFOX1-206ENST00000535565 ZNF738Q8NE65 137 aa17.24■□□□□ 0.35
RBFOX1-206ENST00000535565 TRAV2A0A0B4J234 112 aa17.23■□□□□ 0.35
RBFOX1-206ENST00000535565 K7EQG2 157 aa17.23■□□□□ 0.35
RBFOX1-206ENST00000535565 SNRPD3P62318 126 aaKnown RBP17.23■□□□□ 0.35
RBFOX1-206ENST00000535565 CD300EQ496F6 205 aaPredicted RBP17.23■□□□□ 0.35
RBFOX1-206ENST00000535565 CENPWQ5EE01 88 aa17.23■□□□□ 0.35
RBFOX1-206ENST00000535565 SDF2L1Q9HCN8 221 aa17.23■□□□□ 0.35
RBFOX1-206ENST00000535565 M0R036 132 aa17.23■□□□□ 0.35
RBFOX1-206ENST00000535565 SHISA2Q6UWI4 295 aa17.23■□□□□ 0.35
RBFOX1-206ENST00000535565 C20orf173Q96LM9 149 aa17.23■□□□□ 0.35
RBFOX1-206ENST00000535565 TRBV20OR9-2A0A075B6H5 130 aa17.22■□□□□ 0.35
RBFOX1-206ENST00000535565 FBLL1A6NHQ2 334 aaKnown RBP17.22■□□□□ 0.35
RBFOX1-206ENST00000535565 IGF2BP2-AS1Q96M15 143 aa17.22■□□□□ 0.35
RBFOX1-206ENST00000535565 LY96Q9Y6Y9 160 aa17.22■□□□□ 0.35
RBFOX1-206ENST00000535565 IGKV2-40A0A087WW87 121 aaPredicted RBP17.21■□□□□ 0.35
RBFOX1-206ENST00000535565 RBAKDNA6NC62 111 aa17.21■□□□□ 0.35
RBFOX1-206ENST00000535565 IGKV2D-40P01614 121 aaPredicted RBP17.21■□□□□ 0.35
RBFOX1-206ENST00000535565 ADIRFQ15847 76 aa17.21■□□□□ 0.35
RBFOX1-206ENST00000535565 CLRN3Q8NCR9 226 aa17.21■□□□□ 0.35
RBFOX1-206ENST00000535565 SGK494Q96LW2 274 aa17.21■□□□□ 0.35
RBFOX1-206ENST00000535565 SPAG8Q99932 426 aaPredicted RBP17.21■□□□□ 0.35
RBFOX1-206ENST00000535565 TRAV8-1A0A0A6YYK1 113 aa17.2■□□□□ 0.34
RBFOX1-206ENST00000535565 TRBV6-1A0A0K0K1D8 114 aa17.2■□□□□ 0.34
RBFOX1-206ENST00000535565 PRB4P10163 310 aaPredicted RBP17.2■□□□□ 0.34
RBFOX1-206ENST00000535565 FLI1Q01543 452 aaPredicted RBP17.2■□□□□ 0.34
RBFOX1-206ENST00000535565 OR4C46A6NHA9 309 aa17.19■□□□□ 0.34
RBFOX1-206ENST00000535565 ZNF688P0C7X2 276 aa17.19■□□□□ 0.34
RBFOX1-206ENST00000535565 RPL23P62829 140 aaKnown RBP17.19■□□□□ 0.34
RBFOX1-206ENST00000535565 Q86TA4 180 aa17.19■□□□□ 0.34
RBFOX1-206ENST00000535565 BAGE2Q86Y30 109 aa17.19■□□□□ 0.34
RBFOX1-206ENST00000535565 OR2K2Q8NGT1 345 aa17.19■□□□□ 0.34
RBFOX1-206ENST00000535565 PSG8Q9UQ74 426 aa17.19■□□□□ 0.34
RBFOX1-206ENST00000535565 PGPEP1LA6NFU8 196 aa17.19■□□□□ 0.34
RBFOX1-206ENST00000535565 PRAC2D3DTV9 90 aa17.19■□□□□ 0.34
RBFOX1-206ENST00000535565 IGLV2-11P01706 119 aa17.19■□□□□ 0.34
RBFOX1-206ENST00000535565 PRNTQ86SH4 94 aa17.19■□□□□ 0.34
RBFOX1-206ENST00000535565 LINC01551Q86U37 167 aa17.19■□□□□ 0.34
RBFOX1-206ENST00000535565 SMIM12Q96EX1 92 aa17.19■□□□□ 0.34
RBFOX1-206ENST00000535565 LTAP01374 205 aa17.18■□□□□ 0.34
RBFOX1-206ENST00000535565 IGLV1-51P01701 117 aa17.18■□□□□ 0.34
RBFOX1-206ENST00000535565 PSMG4Q5JS54 123 aa17.18■□□□□ 0.34
RBFOX1-206ENST00000535565 OCC1Q8TAD7 63 aa17.18■□□□□ 0.34
RBFOX1-206ENST00000535565 FBN1P35555 2871 aaKnown RBP17.17■□□□□ 0.34
RBFOX1-206ENST00000535565 B4DEV8 164 aa17.17■□□□□ 0.34
RBFOX1-206ENST00000535565 RHEBQ15382 184 aa17.17■□□□□ 0.34
RBFOX1-206ENST00000535565 FAM24BQ8N5W8 94 aa17.17■□□□□ 0.34
RBFOX1-206ENST00000535565 OR10J6PQ8NGY7 276 aa17.17■□□□□ 0.34
RBFOX1-206ENST00000535565 VGLL1Q99990 258 aa17.17■□□□□ 0.34
RBFOX1-206ENST00000535565 ZFP30Q9Y2G7 519 aa17.17■□□□□ 0.34
RBFOX1-206ENST00000535565 INSL3P51460 131 aa17.16■□□□□ 0.34
RBFOX1-206ENST00000535565 TMEM78Q5T7P6 136 aa17.16■□□□□ 0.34
RBFOX1-206ENST00000535565 AURKAIP1Q9NWT8 199 aaPredicted RBP17.16■□□□□ 0.34
RBFOX1-206ENST00000535565 IZUMO1RA6ND01 250 aa17.15■□□□□ 0.34
RBFOX1-206ENST00000535565 CD33P20138 364 aa17.15■□□□□ 0.34
RBFOX1-206ENST00000535565 C9orf66Q5T8R8 295 aa17.15■□□□□ 0.34
RBFOX1-206ENST00000535565 MGST1P10620 155 aaKnown RBP17.15■□□□□ 0.34
RBFOX1-206ENST00000535565 C9orf47Q6ZRZ4 202 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms