RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 U3KQ87 197 aa5.37□□□□□ -1.55
CLIP1-206ENST00000535290 LPAP08519 4548 aa5.36□□□□□ -1.55
CLIP1-206ENST00000535290 TRGV4A0A0C4DH28 118 aa5.36□□□□□ -1.55
CLIP1-206ENST00000535290 CDS2O95674 445 aa5.36□□□□□ -1.55
CLIP1-206ENST00000535290 SFTA3P0C7M3 94 aa5.36□□□□□ -1.55
CLIP1-206ENST00000535290 CT45A10P0DMU9 189 aa5.36□□□□□ -1.55
CLIP1-206ENST00000535290 PRSS3P35030 304 aa5.36□□□□□ -1.55
CLIP1-206ENST00000535290 TCL1AP56279 114 aa5.36□□□□□ -1.55
CLIP1-206ENST00000535290 MZT2AQ6P582 158 aa5.36□□□□□ -1.55
CLIP1-206ENST00000535290 LRRC20Q8TCA0 184 aa5.36□□□□□ -1.55
CLIP1-206ENST00000535290 PCNPQ8WW12 178 aaKnown RBP5.36□□□□□ -1.55
CLIP1-206ENST00000535290 ZNF486Q96H40 463 aaPredicted RBP5.36□□□□□ -1.55
CLIP1-206ENST00000535290 SHANK2-AS3Q9BTD1 123 aa5.36□□□□□ -1.55
CLIP1-206ENST00000535290 TMEM147Q9BVK8 224 aa5.36□□□□□ -1.55
CLIP1-206ENST00000535290 A0A087X0K7 114 aa5.35□□□□□ -1.55
CLIP1-206ENST00000535290 LOC100131303A0A0U1RQF7 123 aa5.35□□□□□ -1.55
CLIP1-206ENST00000535290 H3BRN7 92 aa5.35□□□□□ -1.55
CLIP1-206ENST00000535290 CFDP00746 253 aaPredicted RBP5.35□□□□□ -1.55
CLIP1-206ENST00000535290 SNRPCP09234 159 aaKnown RBP5.35□□□□□ -1.55
CLIP1-206ENST00000535290 RPL7P18124 248 aaKnown RBP5.35□□□□□ -1.55
CLIP1-206ENST00000535290 ANXA2RQ3ZCQ2 193 aa5.35□□□□□ -1.55
CLIP1-206ENST00000535290 STEAP1BQ6NZ63 245 aa5.35□□□□□ -1.55
CLIP1-206ENST00000535290 SELENOHQ8IZQ5 122 aaKnown RBP5.35□□□□□ -1.55
CLIP1-206ENST00000535290 GPX8Q8TED1 209 aa5.35□□□□□ -1.55
CLIP1-206ENST00000535290 GLYATL2Q8WU03 294 aa5.35□□□□□ -1.55
CLIP1-206ENST00000535290 S100A16Q96FQ6 103 aaKnown RBP5.35□□□□□ -1.55
CLIP1-206ENST00000535290 ZNF479Q96JC4 524 aa5.35□□□□□ -1.55
CLIP1-206ENST00000535290 TXNDC17Q9BRA2 123 aa5.35□□□□□ -1.55
CLIP1-206ENST00000535290 KRTAP4-2Q9BYR5 136 aa5.35□□□□□ -1.55
CLIP1-206ENST00000535290 TMEM222Q9H0R3 208 aa5.35□□□□□ -1.55
CLIP1-206ENST00000535290 COPZ2Q9P299 210 aa5.35□□□□□ -1.55
CLIP1-206ENST00000535290 RNF222A6NCQ9 220 aa5.34□□□□□ -1.55
CLIP1-206ENST00000535290 ORM1P02763 201 aa5.34□□□□□ -1.55
CLIP1-206ENST00000535290 LEPP41159 167 aa5.34□□□□□ -1.55
CLIP1-206ENST00000535290 TIRAPP58753 221 aa5.34□□□□□ -1.55
CLIP1-206ENST00000535290 ZNF846Q147U1 533 aa5.34□□□□□ -1.55
CLIP1-206ENST00000535290 LHFPL1Q86WI0 220 aa5.34□□□□□ -1.55
CLIP1-206ENST00000535290 IQCF2Q8IXL9 164 aa5.34□□□□□ -1.55
CLIP1-206ENST00000535290 EIF4E3Q8N5X7 224 aaKnown RBP5.34□□□□□ -1.55
CLIP1-206ENST00000535290 ZBTB8BQ8NAP8 495 aaPredicted RBP5.34□□□□□ -1.55
CLIP1-206ENST00000535290 BPIFCQ8NFQ6 507 aa5.34□□□□□ -1.55
CLIP1-206ENST00000535290 DTD1Q8TEA8 209 aa5.34□□□□□ -1.55
CLIP1-206ENST00000535290 RBKSQ9H477 322 aa5.34□□□□□ -1.55
CLIP1-206ENST00000535290 TP53TG3Q9ULZ0 132 aa5.34□□□□□ -1.55
CLIP1-206ENST00000535290 TRAV8-6A0A0B4J262 113 aa5.33□□□□□ -1.56
CLIP1-206ENST00000535290 PMS2P5A8MQ11 134 aa5.33□□□□□ -1.56
CLIP1-206ENST00000535290 MRPS12O15235 138 aaKnown RBP5.33□□□□□ -1.56
CLIP1-206ENST00000535290 PPT1P50897 306 aa5.33□□□□□ -1.56
CLIP1-206ENST00000535290 SRSF3P84103 164 aaKnown RBP5.33□□□□□ -1.56
CLIP1-206ENST00000535290 CD300CQ08708 224 aa5.33□□□□□ -1.56
CLIP1-206ENST00000535290 RAB32Q13637 225 aa5.33□□□□□ -1.56
CLIP1-206ENST00000535290 LAGE3Q14657 143 aa5.33□□□□□ -1.56
CLIP1-206ENST00000535290 OR10J3Q5JRS4 329 aa5.33□□□□□ -1.56
CLIP1-206ENST00000535290 GPR107Q5VW38 600 aa5.33□□□□□ -1.56
CLIP1-206ENST00000535290 Q8N976 141 aa5.33□□□□□ -1.56
CLIP1-206ENST00000535290 LINC01600Q96MT4 127 aa5.33□□□□□ -1.56
CLIP1-206ENST00000535290 SLC25A31Q9H0C2 315 aa5.33□□□□□ -1.56
CLIP1-206ENST00000535290 ZNF331Q9NQX6 463 aaPredicted RBP5.33□□□□□ -1.56
CLIP1-206ENST00000535290 C7orf71A4D174 169 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 CRYM-AS1A6NIL9 109 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 C9JCJ5 164 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 H3BTX0 84 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 SLC25A5P05141 298 aaKnown RBP5.32□□□□□ -1.56
CLIP1-206ENST00000535290 SULT1A3P0DMM9 295 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 SULT1A4P0DMN0 295 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 S100A7P31151 101 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 ATP5IP56385 69 aaPredicted RBP5.32□□□□□ -1.56
CLIP1-206ENST00000535290 BTN1A1Q13410 526 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 IBA57Q5T440 356 aaKnown RBP5.32□□□□□ -1.56
CLIP1-206ENST00000535290 TMEM268Q5VZI3 342 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 Q6ZQT7 251 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 CCDC71LQ8N9Z2 235 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 NHLRC2Q8NBF2 726 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 OR13C8Q8NGS7 320 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 OR1S1Q8NH92 325 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 ODF3Q96PU9 254 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 DPH3P1Q9H4G8 78 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 HSPB7Q9UBY9 170 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 RPH3ALQ9UNE2 315 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 SSR3Q9UNL2 185 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 HIGD1AQ9Y241 93 aa5.32□□□□□ -1.56
CLIP1-206ENST00000535290 TRAV8-3A0A0A6YYJ7 113 aa5.31□□□□□ -1.56
CLIP1-206ENST00000535290 TEX13DA0A0J9YY54 714 aaPredicted RBP5.31□□□□□ -1.56
CLIP1-206ENST00000535290 PANO1I0J062 215 aa5.31□□□□□ -1.56
CLIP1-206ENST00000535290 SLC17A3O00476 420 aa5.31□□□□□ -1.56
CLIP1-206ENST00000535290 HYPMO75409 117 aa5.31□□□□□ -1.56
CLIP1-206ENST00000535290 B3GALNT1O75752 331 aa5.31□□□□□ -1.56
CLIP1-206ENST00000535290 RNASE4P34096 147 aaKnown RBP5.31□□□□□ -1.56
CLIP1-206ENST00000535290 RAP2BP61225 183 aa5.31□□□□□ -1.56
CLIP1-206ENST00000535290 UBE2NLQ5JXB2 153 aa5.31□□□□□ -1.56
CLIP1-206ENST00000535290 MZT2BQ6NZ67 158 aa5.31□□□□□ -1.56
CLIP1-206ENST00000535290 SAMD12Q8N8I0 201 aa5.31□□□□□ -1.56
CLIP1-206ENST00000535290 PAIP2BQ9ULR5 123 aaKnown RBP5.31□□□□□ -1.56
CLIP1-206ENST00000535290 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.31□□□□□ -1.56
CLIP1-206ENST00000535290 A0A087WWL8 130 aa5.3□□□□□ -1.56
CLIP1-206ENST00000535290 KLLNB2CW77 178 aa5.3□□□□□ -1.56
CLIP1-206ENST00000535290 PRSS46E5RG02 174 aa5.3□□□□□ -1.56
CLIP1-206ENST00000535290 MPDU1O75352 247 aa5.3□□□□□ -1.56
CLIP1-206ENST00000535290 OR5G3P0C626 314 aa5.3□□□□□ -1.56
CLIP1-206ENST00000535290 CXCL2P19875 107 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms