RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 PROK1P58294 105 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 GCSAMLQ5JQS6 135 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 TEPPQ6URK8 271 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 RNF152Q8N8N0 203 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 TRAV9-2A0A087WT02 112 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 HELTA6NFD8 242 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 CORTO00230 105 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 SLC17A3O00476 420 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 ELANEP08246 267 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 C3orf79P0CE67 100 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 DEFA4P12838 97 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 CD33P20138 364 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 PSMB8P28062 276 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 FOXE3Q13461 319 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 KLF5Q13887 457 aaPredicted RBP9.56□□□□□ -0.88
SCARB1-204ENST00000535005 OR8I2Q8N0Y5 310 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 CHRDL1Q9BU40 450 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 RNF114Q9Y508 228 aa9.56□□□□□ -0.88
SCARB1-204ENST00000535005 IZUMO1RA6ND01 250 aa9.55□□□□□ -0.88
SCARB1-204ENST00000535005 LINC00869P0C866 280 aa9.55□□□□□ -0.88
SCARB1-204ENST00000535005 TFPI2P48307 235 aa9.55□□□□□ -0.88
SCARB1-204ENST00000535005 C21orf62-AS1Q17RA5 79 aa9.55□□□□□ -0.88
SCARB1-204ENST00000535005 CENPWQ5EE01 88 aa9.55□□□□□ -0.88
SCARB1-204ENST00000535005 MIC13Q5XKP0 118 aa9.55□□□□□ -0.88
SCARB1-204ENST00000535005 PQLC2Q6ZP29 291 aa9.55□□□□□ -0.88
SCARB1-204ENST00000535005 ZNF329Q86UD4 541 aa9.55□□□□□ -0.88
SCARB1-204ENST00000535005 NIT1Q86X76 327 aa9.55□□□□□ -0.88
SCARB1-204ENST00000535005 THYN1Q9P016 225 aa9.55□□□□□ -0.88
SCARB1-204ENST00000535005 BMPR1BO00238 502 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 CCL25O15444 150 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 APCSP02743 223 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 PPBPP02775 128 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 TAS2R45P59539 299 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 PRR20EP86478 221 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 PRR20CP86479 221 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 PRR20DP86480 221 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 PRR20BP86481 221 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 PRR20AP86496 221 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 KRTAP24-1Q3LI83 254 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 STPG3Q8N7X2 389 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 ZNF355PQ9NSJ1 428 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 TECRQ9NZ01 308 aaKnown RBP9.54□□□□□ -0.88
SCARB1-204ENST00000535005 TRAV30A0A087WSZ9 112 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 FAM223BA6NKX1 122 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 F2Z2F3 143 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 PF4V1P10720 104 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 PMCHP20382 165 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 RAB9AP51151 201 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 C10orf99Q6UWK7 81 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 FAM231DQ6ZW35 169 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 FAM223AQ8IWN6 122 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 MYOZ3Q8TDC0 251 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 TSKUQ8WUA8 353 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 KLK15Q9H2R5 256 aa9.54□□□□□ -0.88
SCARB1-204ENST00000535005 A0A1W2PRE2 83 aa9.53□□□□□ -0.88
SCARB1-204ENST00000535005 I3L2K1 104 aa9.53□□□□□ -0.88
SCARB1-204ENST00000535005 K7EIM0 57 aa9.53□□□□□ -0.88
SCARB1-204ENST00000535005 TRGV3P03979 118 aa9.53□□□□□ -0.88
SCARB1-204ENST00000535005 SRIP30626 198 aa9.53□□□□□ -0.88
SCARB1-204ENST00000535005 RHOGP84095 191 aa9.53□□□□□ -0.88
SCARB1-204ENST00000535005 PET117Q6UWS5 81 aa9.53□□□□□ -0.88
SCARB1-204ENST00000535005 CACNG8Q8WXS5 425 aa9.53□□□□□ -0.88
SCARB1-204ENST00000535005 USMG5Q96IX5 58 aa9.53□□□□□ -0.88
SCARB1-204ENST00000535005 ZNF331Q9NQX6 463 aaPredicted RBP9.53□□□□□ -0.88
SCARB1-204ENST00000535005 OR2J3O76001 311 aa9.52□□□□□ -0.89
SCARB1-204ENST00000535005 CD69Q07108 199 aa9.52□□□□□ -0.89
SCARB1-204ENST00000535005 ATP5L2Q7Z4Y8 100 aa9.52□□□□□ -0.89
SCARB1-204ENST00000535005 OR4X2Q8NGF9 303 aa9.52□□□□□ -0.89
SCARB1-204ENST00000535005 WFDC12Q8WWY7 111 aa9.52□□□□□ -0.89
SCARB1-204ENST00000535005 ALKBH7Q9BT30 221 aaPredicted RBP9.52□□□□□ -0.89
SCARB1-204ENST00000535005 FNDC4Q9H6D8 234 aaPredicted RBP9.52□□□□□ -0.89
SCARB1-204ENST00000535005 ST20Q9HBF5 79 aa9.52□□□□□ -0.89
SCARB1-204ENST00000535005 A0A0G2JLM5 398 aa9.52□□□□□ -0.89
SCARB1-204ENST00000535005 TCTEX1D4Q5JR98 221 aa9.52□□□□□ -0.89
SCARB1-204ENST00000535005 ETFRF1Q6IPR1 90 aa9.52□□□□□ -0.89
SCARB1-204ENST00000535005 RNASE8Q8TDE3 154 aaKnown RBP9.52□□□□□ -0.89
SCARB1-204ENST00000535005 ATP6V0BQ99437 205 aa9.52□□□□□ -0.89
SCARB1-204ENST00000535005 MRPL32Q9BYC8 188 aaKnown RBP9.52□□□□□ -0.89
SCARB1-204ENST00000535005 UBE2G1P62253 170 aa9.51□□□□□ -0.89
SCARB1-204ENST00000535005 ATP5G2Q06055 141 aa9.51□□□□□ -0.89
SCARB1-204ENST00000535005 C15orf32Q32M92 178 aa9.51□□□□□ -0.89
SCARB1-204ENST00000535005 IBA57Q5T440 356 aaKnown RBP9.51□□□□□ -0.89
SCARB1-204ENST00000535005 SMIM15Q7Z3B0 74 aa9.51□□□□□ -0.89
SCARB1-204ENST00000535005 ZNF491Q8N8L2 437 aa9.51□□□□□ -0.89
SCARB1-204ENST00000535005 C18orf32Q8TCD1 76 aa9.51□□□□□ -0.89
SCARB1-204ENST00000535005 TMEM158Q8WZ71 300 aa9.51□□□□□ -0.89
SCARB1-204ENST00000535005 SMIM12Q96EX1 92 aa9.51□□□□□ -0.89
SCARB1-204ENST00000535005 UBE2E2Q96LR5 201 aa9.51□□□□□ -0.89
SCARB1-204ENST00000535005 IGF2BP2-AS1Q96M15 143 aa9.51□□□□□ -0.89
SCARB1-204ENST00000535005 RCHY1Q96PM5 261 aa9.51□□□□□ -0.89
SCARB1-204ENST00000535005 FBN1P35555 2871 aaKnown RBP9.51□□□□□ -0.89
SCARB1-204ENST00000535005 HAX1O00165 279 aa9.5□□□□□ -0.89
SCARB1-204ENST00000535005 FCGR2BP31994 310 aaPredicted RBP9.5□□□□□ -0.89
SCARB1-204ENST00000535005 MLANAQ16655 118 aa9.5□□□□□ -0.89
SCARB1-204ENST00000535005 LCNL1Q6ZST4 164 aa9.5□□□□□ -0.89
SCARB1-204ENST00000535005 OR4C5Q8NGB2 326 aa9.5□□□□□ -0.89
SCARB1-204ENST00000535005 SEPSECSQ9HD40 501 aaKnown RBP9.5□□□□□ -0.89
SCARB1-204ENST00000535005 TRBV7-1A0A0A6YYK4 115 aa9.49□□□□□ -0.89
SCARB1-204ENST00000535005 HSBP1O75506 76 aa9.49□□□□□ -0.89
SCARB1-204ENST00000535005 TMEM116Q8NCL8 245 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms