RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 FRMD6-AS1P0C7T7 363 aa5.67□□□□□ -1.5
CASP4-212ENST00000533730 CXCL3P19876 107 aa5.67□□□□□ -1.5
CASP4-212ENST00000533730 PLP1P60201 277 aa5.67□□□□□ -1.5
CASP4-212ENST00000533730 EWSR1Q01844 656 aaKnown RBP eCLIP5.67□□□□□ -1.5
CASP4-212ENST00000533730 ARL16Q0P5N6 197 aa5.67□□□□□ -1.5
CASP4-212ENST00000533730 FCN2Q15485 313 aa5.67□□□□□ -1.5
CASP4-212ENST00000533730 SAMD13Q5VXD3 122 aa5.67□□□□□ -1.5
CASP4-212ENST00000533730 OR11H7Q8NGC8 314 aa5.67□□□□□ -1.5
CASP4-212ENST00000533730 RPL36ALQ969Q0 106 aaKnown RBP5.67□□□□□ -1.5
CASP4-212ENST00000533730 GPR82Q96P67 336 aa5.67□□□□□ -1.5
CASP4-212ENST00000533730 OR5AC2Q9NZP5 309 aa5.67□□□□□ -1.5
CASP4-212ENST00000533730 A0A087WZ39 114 aa5.66□□□□□ -1.5
CASP4-212ENST00000533730 IGHV3-66A0A0C4DH42 116 aa5.66□□□□□ -1.5
CASP4-212ENST00000533730 UBE2L5PA0A1B0GUS4 154 aa5.66□□□□□ -1.5
CASP4-212ENST00000533730 AGPAT2O15120 278 aa5.66□□□□□ -1.5
CASP4-212ENST00000533730 HYPMO75409 117 aa5.66□□□□□ -1.5
CASP4-212ENST00000533730 LINC00869P0C866 280 aa5.66□□□□□ -1.5
CASP4-212ENST00000533730 ORM2P19652 201 aa5.66□□□□□ -1.5
CASP4-212ENST00000533730 STXBP6Q8NFX7 210 aa5.66□□□□□ -1.5
CASP4-212ENST00000533730 OR5C1Q8NGR4 320 aa5.66□□□□□ -1.5
CASP4-212ENST00000533730 OR1B1Q8NGR6 318 aa5.66□□□□□ -1.5
CASP4-212ENST00000533730 RNF126Q9BV68 326 aa5.66□□□□□ -1.5
CASP4-212ENST00000533730 MS4A6AQ9H2W1 248 aa5.66□□□□□ -1.5
CASP4-212ENST00000533730 KCNIP2Q9NS61 270 aa5.66□□□□□ -1.5
CASP4-212ENST00000533730 MBD2Q9UBB5 411 aa5.66□□□□□ -1.5
CASP4-212ENST00000533730 HIGD1AQ9Y241 93 aa5.66□□□□□ -1.5
CASP4-212ENST00000533730 HSPB11Q9Y547 144 aa5.66□□□□□ -1.5
CASP4-212ENST00000533730 SELENOKQ9Y6D0 94 aa5.66□□□□□ -1.5
CASP4-212ENST00000533730 IGKV3-7A0A075B6H7 116 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 ZNF98A6NK75 572 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 H0Y8G0 127 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 OR5G3P0C626 314 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 FGF7P21781 194 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 RPL12P30050 165 aaKnown RBP5.65□□□□□ -1.5
CASP4-212ENST00000533730 GALR1P47211 349 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 RPL29P47914 159 aaKnown RBP5.65□□□□□ -1.5
CASP4-212ENST00000533730 TFPI2P48307 235 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 MEOX2P50222 304 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 SNRPD3P62318 126 aaKnown RBP5.65□□□□□ -1.5
CASP4-212ENST00000533730 Q6ZRG5 221 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 OR8I2Q8N0Y5 310 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 DEFB125Q8N687 156 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 ZNF709Q8N972 641 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 OR1L4Q8NGR5 311 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 PFDN5Q99471 154 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 MGST2Q99735 147 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 SHANK2-AS3Q9BTD1 123 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 GGTLC1Q9BX51 225 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 NRN1Q9NPD7 142 aa5.65□□□□□ -1.5
CASP4-212ENST00000533730 C17orf112F2Z3M2 114 aa5.64□□□□□ -1.51
CASP4-212ENST00000533730 H3BRN7 92 aa5.64□□□□□ -1.51
CASP4-212ENST00000533730 K7EQG2 157 aa5.64□□□□□ -1.51
CASP4-212ENST00000533730 COX7A2P2O60397 106 aa5.64□□□□□ -1.51
CASP4-212ENST00000533730 TSHBP01222 138 aa5.64□□□□□ -1.51
CASP4-212ENST00000533730 IFNA5P01569 189 aa5.64□□□□□ -1.51
CASP4-212ENST00000533730 RPL7P18124 248 aaKnown RBP5.64□□□□□ -1.51
CASP4-212ENST00000533730 GATA2P23769 480 aaPredicted RBP5.64□□□□□ -1.51
CASP4-212ENST00000533730 ID1P41134 155 aa5.64□□□□□ -1.51
CASP4-212ENST00000533730 SRSF9Q13242 221 aaKnown RBP eCLIP5.64□□□□□ -1.51
CASP4-212ENST00000533730 DCANP1Q8TF63 244 aa5.64□□□□□ -1.51
CASP4-212ENST00000533730 UHRF2Q96PU4 802 aa5.64□□□□□ -1.51
CASP4-212ENST00000533730 ATP5SQ99766 215 aa5.64□□□□□ -1.51
CASP4-212ENST00000533730 PARD6GQ9BYG4 376 aaPredicted RBP5.64□□□□□ -1.51
CASP4-212ENST00000533730 SLC25A39Q9BZJ4 359 aaPredicted RBP5.64□□□□□ -1.51
CASP4-212ENST00000533730 ARL6Q9H0F7 186 aa5.64□□□□□ -1.51
CASP4-212ENST00000533730 SLC39A9Q9NUM3 307 aa5.64□□□□□ -1.51
CASP4-212ENST00000533730 DOK5Q9P104 306 aa5.64□□□□□ -1.51
CASP4-212ENST00000533730 LOC102724200A0A096LPH7 203 aaPredicted RBP5.63□□□□□ -1.51
CASP4-212ENST00000533730 KIR2DL5BA0A0G2JN68 375 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 KIR2DL5BA0A0G2JPC4 375 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 PSMB3P49720 205 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 APOC4P55056 127 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 B2MP61769 119 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 ZNF266Q14584 549 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 CLINT1Q14677 625 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 C10orf113Q5VZT2 155 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 LINC00322Q6ZN03 302 aaPredicted RBP5.63□□□□□ -1.51
CASP4-212ENST00000533730 KIR2DL5AQ8N109 375 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 INO80EQ8NBZ0 244 aaPredicted RBP5.63□□□□□ -1.51
CASP4-212ENST00000533730 OR2T35Q8NGX2 323 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 KIR2DL5BQ8NHK3 375 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 SCGB1C1Q8TD33 95 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 GATAD1Q8WUU5 269 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 ST6GAL2Q96JF0 529 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 AQP10Q96PS8 301 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 NPCDR1Q9BY65 106 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 WDR61Q9GZS3 305 aaKnown RBP5.63□□□□□ -1.51
CASP4-212ENST00000533730 ARV1Q9H2C2 271 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 SLC25A22Q9H936 323 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 PXMP4Q9Y6I8 212 aa5.63□□□□□ -1.51
CASP4-212ENST00000533730 RBMY1BA6NDE4 496 aaKnown RBP5.62□□□□□ -1.51
CASP4-212ENST00000533730 RBMY1EA6NEQ0 496 aaKnown RBP5.62□□□□□ -1.51
CASP4-212ENST00000533730 ISLRO14498 428 aa5.62□□□□□ -1.51
CASP4-212ENST00000533730 RBMY1DP0C7P1 496 aaKnown RBP5.62□□□□□ -1.51
CASP4-212ENST00000533730 FHITP49789 147 aa5.62□□□□□ -1.51
CASP4-212ENST00000533730 PPT1P50897 306 aa5.62□□□□□ -1.51
CASP4-212ENST00000533730 DEFB131AP59861 70 aa5.62□□□□□ -1.51
CASP4-212ENST00000533730 HAGHQ16775 308 aa5.62□□□□□ -1.51
CASP4-212ENST00000533730 LINC01620Q4KN68 170 aa5.62□□□□□ -1.51
CASP4-212ENST00000533730 MIC13Q5XKP0 118 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms