RNA–Protein interactions for RNA: ENST00000532339.1

CD44-235, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-235ENST00000532339 OR2T8A6NH00 312 aa2□□□□□ -2.09
CD44-235ENST00000532339 C9JCJ5 164 aa2□□□□□ -2.09
CD44-235ENST00000532339 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2□□□□□ -2.09
CD44-235ENST00000532339 UPK2O00526 184 aa2□□□□□ -2.09
CD44-235ENST00000532339 GYG2O15488 501 aa2□□□□□ -2.09
CD44-235ENST00000532339 RBBP9O75884 186 aa2□□□□□ -2.09
CD44-235ENST00000532339 SOX14O95416 240 aa2□□□□□ -2.09
CD44-235ENST00000532339 CD14P08571 375 aa2□□□□□ -2.09
CD44-235ENST00000532339 MAGEA12P43365 314 aa2□□□□□ -2.09
CD44-235ENST00000532339 DEFB131AP59861 70 aa2□□□□□ -2.09
CD44-235ENST00000532339 KRR1Q13601 381 aaKnown RBP2□□□□□ -2.09
CD44-235ENST00000532339 SSX1Q16384 188 aa2□□□□□ -2.09
CD44-235ENST00000532339 KRTAP13-2Q52LG2 175 aa2□□□□□ -2.09
CD44-235ENST00000532339 OR10J3Q5JRS4 329 aa2□□□□□ -2.09
CD44-235ENST00000532339 DNLZQ5SXM8 178 aa2□□□□□ -2.09
CD44-235ENST00000532339 TBPL2Q6SJ96 375 aa2□□□□□ -2.09
CD44-235ENST00000532339 C3orf62Q6ZUJ4 267 aa2□□□□□ -2.09
CD44-235ENST00000532339 TRMT10CQ7L0Y3 403 aaKnown RBP2□□□□□ -2.09
CD44-235ENST00000532339 MRPL52Q86TS9 123 aaKnown RBP2□□□□□ -2.09
CD44-235ENST00000532339 C1orf158Q8N1D5 194 aa2□□□□□ -2.09
CD44-235ENST00000532339 OR5H2Q8NGV7 314 aa2□□□□□ -2.09
CD44-235ENST00000532339 ZNF2Q9BSG1 426 aaPredicted RBP2□□□□□ -2.09
CD44-235ENST00000532339 C1orf50Q9BV19 199 aa2□□□□□ -2.09
CD44-235ENST00000532339 NSRP1Q9H0G5 558 aaKnown RBP2□□□□□ -2.09
CD44-235ENST00000532339 DAZ1Q9NQZ3 744 aaKnown RBP2□□□□□ -2.09
CD44-235ENST00000532339 METTL1Q9UBP6 276 aaKnown RBP2□□□□□ -2.09
CD44-235ENST00000532339 CD300AQ9UGN4 299 aa2□□□□□ -2.09
CD44-235ENST00000532339 A0A087WUU8 490 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 MEIKINA0A087WXM9 373 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 ZNF98A6NK75 572 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 C5orf58C9J3I9 102 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 ZNF878C9JN71 531 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 C9JQL5 133 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 H3BNG1 76 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 M0QXV9 152 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 AZIN1O14977 448 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 OR2H2O95918 312 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 OR5AC1P0C628 307 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 CELP19835 753 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 PSMB6P28072 239 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 CDKN2CP42773 168 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 CNBPP62633 177 aaKnown RBP1.99□□□□□ -2.09
CD44-235ENST00000532339 PRKCDQ05655 676 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 PLEKHG7Q6ZR37 379 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 DCXRQ7Z4W1 244 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 DAZ4Q86SG3 579 aaKnown RBP1.99□□□□□ -2.09
CD44-235ENST00000532339 Q8IYB0 196 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 RNF182Q8N6D2 247 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 IFT81Q8WYA0 676 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 MAL2Q969L2 176 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 TESCQ96BS2 214 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 SLAMF6Q96DU3 332 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 DIABLOQ9NR28 239 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 MED31Q9Y3C7 131 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 DNAJC15Q9Y5T4 150 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 LY96Q9Y6Y9 160 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 URGCP-MRPS24S4R325 110 aa1.99□□□□□ -2.09
CD44-235ENST00000532339 IGKV3-7A0A075B6H7 116 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 TRAV27A0A087WT01 109 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 TRPC5OSA6NMA1 111 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 SULT1C2O00338 296 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 SDCBPO00560 298 aaPredicted RBP1.98□□□□□ -2.09
CD44-235ENST00000532339 UBDO15205 165 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 FABP7O15540 132 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 SULT1B1O43704 296 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 COX7A2P2O60397 106 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 ENTPD6O75354 484 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 TNFAIP8O95379 198 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 CXorf1O96002 111 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 PRH1P02810 166 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 TPM3P06753 285 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 DEFB130BP0DP73 79 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 DEFB130AP0DP74 79 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 EVI2AP22794 236 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 HSD11B1P28845 292 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 RPS27P42677 84 aaKnown RBP1.98□□□□□ -2.09
CD44-235ENST00000532339 SERPINB9P50453 376 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 FLOT2Q14254 428 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 INSL4Q14641 139 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 FAM162BQ5T6X4 162 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 GLYATQ6IB77 296 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 SPINK6Q6UWN8 80 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 FA2HQ7L5A8 372 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 ZNF664Q8N3J9 261 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 C10orf126Q8N4M7 172 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 ZNF738Q8NE65 137 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 OR51T1Q8NGJ9 327 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 PPP1R36Q96LQ0 422 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 THTPAQ9BU02 230 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 SRRQ9GZT4 340 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 PSORS1C2Q9UIG4 136 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 FIS1Q9Y3D6 152 aa1.98□□□□□ -2.09
CD44-235ENST00000532339 ZNF706Q9Y5V0 76 aaPredicted RBP1.98□□□□□ -2.09
CD44-235ENST00000532339 TRAV2A0A0B4J234 112 aa1.97□□□□□ -2.09
CD44-235ENST00000532339 H3BP45 60 aa1.97□□□□□ -2.09
CD44-235ENST00000532339 SMLR1H3BR10 107 aa1.97□□□□□ -2.09
CD44-235ENST00000532339 K7EPK0 472 aa1.97□□□□□ -2.09
CD44-235ENST00000532339 CRXO43186 299 aaPredicted RBP1.97□□□□□ -2.09
CD44-235ENST00000532339 PDCD6O75340 191 aa1.97□□□□□ -2.09
CD44-235ENST00000532339 NRASP01111 189 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms