RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 PCLOQ9Y6V0 5065 aa3.62□□□□□ -1.83
SSBP3-213ENST00000530618 IGHV3OR16-13A0A075B7E8 117 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 IGHV3-74A0A0B4J1X5 117 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 PDE6DO43924 150 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 DUSP14O95147 198 aaKnown RBP3.61□□□□□ -1.83
SSBP3-213ENST00000530618 S100A9P06702 114 aaKnown RBP3.61□□□□□ -1.83
SSBP3-213ENST00000530618 ARL14EPLP0DKL9 152 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 GCHFRP30047 84 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 TFPI2P48307 235 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 CD81P60033 236 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 CD300CQ08708 224 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 LEMD1Q68G75 181 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 MIR17HGQ75NE6 70 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 WFDC3Q8IUB2 231 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 STHQ8IWL8 128 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 TMEM61Q8N0U2 210 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 ARL6IP6Q8N6S5 226 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 ZNF680Q8NEM1 530 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 BLNKQ8WV28 456 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 LINC00052Q96N35 136 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 B9D2Q9BPU9 175 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 SLC25A2Q9BXI2 301 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 MS4A6AQ9H2W1 248 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 OTORQ9NRC9 128 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 U3KQE9 123 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 PKHD1P08F94 4074 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 KIAA1109Q2LD37 5005 aa3.61□□□□□ -1.83
SSBP3-213ENST00000530618 TRBV19A0A075B6N1 114 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 TRAV1-1A0A0B4J248 108 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 A0A1W2PRE2 83 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 AMBPP02760 352 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 OR10J4P0C629 311 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 TSPOP30536 169 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 FHITP49789 147 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 APOC4P55056 127 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 PEA15Q15121 130 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 GCSAMLQ5JQS6 135 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 PSMG4Q5JS54 123 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 TMEM78Q5T7P6 136 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 CST9LP1Q5W188 147 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 PATE2Q6UY27 113 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 GBGT1Q8N5D6 347 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 RPP25LQ8N5L8 163 aaKnown RBP3.6□□□□□ -1.83
SSBP3-213ENST00000530618 C5orf17Q8NAS9 161 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 MBD3L1Q8WWY6 194 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 HIST1H2BAQ96A08 127 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 ZNF414Q96IQ9 312 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 C1QTNF4Q9BXJ3 329 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 EIF5A2Q9GZV4 153 aaKnown RBP3.6□□□□□ -1.83
SSBP3-213ENST00000530618 SMDT1Q9H4I9 107 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 BIN3Q9NQY0 253 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 GNG13Q9P2W3 67 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 VAX2Q9UIW0 290 aa3.6□□□□□ -1.83
SSBP3-213ENST00000530618 RBAKDNA6NC62 111 aa3.59□□□□□ -1.83
SSBP3-213ENST00000530618 PGPA6NDG6 321 aa3.59□□□□□ -1.83
SSBP3-213ENST00000530618 K7EQG2 157 aa3.59□□□□□ -1.83
SSBP3-213ENST00000530618 ATP6V1G1O75348 118 aa3.59□□□□□ -1.83
SSBP3-213ENST00000530618 NDUFS6O75380 124 aaKnown RBP3.59□□□□□ -1.83
SSBP3-213ENST00000530618 APOHP02749 345 aaPredicted RBP3.59□□□□□ -1.83
SSBP3-213ENST00000530618 SLC25A5P05141 298 aaKnown RBP3.59□□□□□ -1.83
SSBP3-213ENST00000530618 ZNF688P0C7X2 276 aa3.59□□□□□ -1.83
SSBP3-213ENST00000530618 IGLC2P0DOY2 106 aa3.59□□□□□ -1.83
SSBP3-213ENST00000530618 PYYP10082 97 aa3.59□□□□□ -1.83
SSBP3-213ENST00000530618 CNN1P51911 297 aaKnown RBP3.59□□□□□ -1.83
SSBP3-213ENST00000530618 FGF8P55075 233 aaPredicted RBP3.59□□□□□ -1.83
SSBP3-213ENST00000530618 UBE2G1P62253 170 aa3.59□□□□□ -1.83
SSBP3-213ENST00000530618 RANP62826 216 aaKnown RBP3.59□□□□□ -1.83
SSBP3-213ENST00000530618 PSG3Q16557 428 aa3.59□□□□□ -1.83
SSBP3-213ENST00000530618 FAM90A2PQ658T7 463 aa3.59□□□□□ -1.83
SSBP3-213ENST00000530618 MORN3Q6PF18 240 aaPredicted RBP3.59□□□□□ -1.83
SSBP3-213ENST00000530618 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.59□□□□□ -1.83
SSBP3-213ENST00000530618 FOXI2Q6ZQN5 318 aa3.59□□□□□ -1.83
SSBP3-213ENST00000530618 WWC2-AS2Q96NR7 200 aa3.59□□□□□ -1.83
SSBP3-213ENST00000530618 ATG101Q9BSB4 218 aa3.59□□□□□ -1.83
SSBP3-213ENST00000530618 Q9H3A6 140 aa3.59□□□□□ -1.83
SSBP3-213ENST00000530618 ZNF331Q9NQX6 463 aaPredicted RBP3.59□□□□□ -1.83
SSBP3-213ENST00000530618 SMAD5-AS1Q9Y6J3 95 aa3.59□□□□□ -1.83
SSBP3-213ENST00000530618 PKD1P98161 4303 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 LOC102724200A0A096LPH7 203 aaPredicted RBP3.58□□□□□ -1.84
SSBP3-213ENST00000530618 TRAV5A0A0B4J249 113 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 A0A1B0GV50 99 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 C11orf94C9JXX5 98 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 UBE2CO00762 179 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 PAGE4O60829 102 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 CT45A10P0DMU9 189 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 BCL2P10415 239 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 LEPP41159 167 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 AKR1C3P42330 323 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 DEFB131AP59861 70 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 UBE2G2P60604 165 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 MEF2BQ02080 365 aaPredicted RBP3.58□□□□□ -1.84
SSBP3-213ENST00000530618 PMS2P11Q13670 270 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 ICAM4Q14773 271 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 NDUFA5Q16718 116 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 SAPCD1Q5SSQ6 148 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 CYB561D1Q8N8Q1 229 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 OR4B1Q8NGF8 309 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 DCANP1Q8TF63 244 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 FXYD5Q96DB9 178 aa3.58□□□□□ -1.84
SSBP3-213ENST00000530618 FMC1Q96HJ9 113 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms