RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 TRAV12-2A0A075B6T6 113 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 IGHV3OR15-7A0A075B7D8 119 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 IGKV1D-8A0A087WSZ0 117 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 TRAV17A0A0B4J275 112 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 IGKV6-21A0A0C4DH24 114 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 UBE2L5PA0A1B0GUS4 154 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 C5orf63A6NC05 138 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 LMO7DNF2Z398 122 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 H7C1H1 209 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 LGALS9O00182 355 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 SPINT2O43291 252 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 SYNGR2O43760 224 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 ACYP1P07311 99 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 IFI6P09912 130 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 PYYP10082 97 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 COX6A1P12074 109 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 PSMB2P49721 201 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 EFNA4P52798 201 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 MFAP2P55001 183 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 HIST1H4AP62805 103 aaKnown RBP2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 PMAIP1Q13794 54 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 VMA21Q3ZAQ7 101 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 CENPWQ5EE01 88 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 TMEM170BQ5T4T1 132 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 PMS2CLQ68D20 193 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 MARCH3Q86UD3 253 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 PDPNQ86YL7 162 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 C11orf53Q8IXP5 236 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 RPRMLQ8N4K4 120 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 TMEM190Q8WZ59 177 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 HDHD3Q9BSH5 251 aaPredicted RBP2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 OCIAD1Q9NX40 245 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 CACNG5Q9UF02 275 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 EPDR1Q9UM22 224 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 ZNF256Q9Y2P7 627 aaPredicted RBP2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 KLF13Q9Y2Y9 288 aaPredicted RBP2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 F11RQ9Y624 299 aaKnown RBP2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 SERP1Q9Y6X1 66 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 AGRNO00468 2067 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 HEATR5BQ9P2D3 2071 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 FREM3P0C091 2139 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 SPTBP11277 2137 aa2.87□□□□□ -1.95
CLNS1A-209ENST00000527299 A0A1B0GWA3 101 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 C19orf71A6NCJ1 209 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 SLC25A20O43772 301 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 CXCL13O43927 109 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 SPINK4O60575 86 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 TCL1BO95988 128 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 IGLV2-8P01709 118 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 HMGA1P17096 107 aaKnown RBP2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 LMO2P25791 158 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 FKBP2P26885 142 aaKnown RBP2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 UBE2D1P51668 147 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 NCBP2P52298 156 aaKnown RBP eCLIP2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 HBBP68871 147 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 Q0VFX4 171 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 C9orf57Q5W0N0 161 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 DGAT2L7PQ6IED9 249 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 C22orf39Q6P5X5 142 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 C5orf38Q86SI9 138 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 LINC00311Q8N616 119 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 OR52N5Q8NH56 324 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 COPS9Q8WXC6 57 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 NABP1Q96AH0 204 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 IFI27L1Q96BM0 104 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 ZNF414Q96IQ9 312 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 TRGV9Q99603 122 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 MGST2Q99735 147 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 NPCDR1Q9BY65 106 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 C16orf95Q9H693 158 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 STARD5Q9NSY2 213 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 GNG12Q9UBI6 72 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 LAMTOR3Q9UHA4 124 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 HHLA3Q9XRX5 114 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 TANC2Q9HCD6 1990 aa2.86□□□□□ -1.95
CLNS1A-209ENST00000527299 LRP4O75096 1905 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 DYSFO75923 2080 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 SMIM26A0A096LP01 95 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 hADV29S1A0JD25 119 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 MYBPHLA2RUH7 354 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 TMEM150CB9EJG8 249 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 H3BMM0 161 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 H3BP45 60 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 H3BSH0 61 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 LTAP01374 205 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 IGHG2P01859 326 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 CISD3P0C7P0 127 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 CTLA4P16410 223 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 DLX1P56177 255 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 FXYD4P59646 89 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 CACNG7P62955 275 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 UBE2L3P68036 154 aaKnown RBP2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 CCL8P80075 99 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 FXYD3Q14802 87 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 FKBP1CQ5VVH2 108 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 LINC00643Q86TS7 51 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 TBC1D26Q86UD7 250 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 LINC01561Q8N1V8 128 aa2.85□□□□□ -1.95
CLNS1A-209ENST00000527299 DRAM1Q8N682 238 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms