RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 KLHL30-AS1Q8NEE0 82 aa14.37□□□□□ -0.11
SMPD1-203ENST00000527275 TMEM190Q8WZ59 177 aa14.37□□□□□ -0.11
SMPD1-203ENST00000527275 FMC1Q96HJ9 113 aa14.37□□□□□ -0.11
SMPD1-203ENST00000527275 A0A1W2PRX2 142 aa14.36□□□□□ -0.11
SMPD1-203ENST00000527275 RELQ04864 619 aaPredicted RBP14.36□□□□□ -0.11
SMPD1-203ENST00000527275 PDE6HQ13956 83 aa14.36□□□□□ -0.11
SMPD1-203ENST00000527275 FAM209BQ5JX69 171 aa14.36□□□□□ -0.11
SMPD1-203ENST00000527275 C4orf3Q8WVX3 66 aa14.36□□□□□ -0.11
SMPD1-203ENST00000527275 BTF3L4Q96K17 158 aa14.36□□□□□ -0.11
SMPD1-203ENST00000527275 ZNF320A2RRD8 509 aa14.36□□□□□ -0.11
SMPD1-203ENST00000527275 C5orf52A6NGY3 159 aa14.36□□□□□ -0.11
SMPD1-203ENST00000527275 TYMSP04818 313 aa14.36□□□□□ -0.11
SMPD1-203ENST00000527275 IBA57Q5T440 356 aaKnown RBP14.36□□□□□ -0.11
SMPD1-203ENST00000527275 WFDC12Q8WWY7 111 aa14.36□□□□□ -0.11
SMPD1-203ENST00000527275 GPR82Q96P67 336 aa14.36□□□□□ -0.11
SMPD1-203ENST00000527275 C12orf57Q99622 126 aa14.35□□□□□ -0.11
SMPD1-203ENST00000527275 TSSC4Q9Y5U2 329 aaPredicted RBP14.35□□□□□ -0.11
SMPD1-203ENST00000527275 IGHV4OR15-8A0A075B7B6 117 aa14.34□□□□□ -0.11
SMPD1-203ENST00000527275 A0A087WW49 117 aa14.34□□□□□ -0.11
SMPD1-203ENST00000527275 C8orf86Q6ZUL3 223 aa14.34□□□□□ -0.11
SMPD1-203ENST00000527275 RPEL1Q2QD12 228 aa14.34□□□□□ -0.11
SMPD1-203ENST00000527275 GOLT1AQ6ZVE7 132 aa14.34□□□□□ -0.11
SMPD1-203ENST00000527275 FRZBQ92765 325 aa14.34□□□□□ -0.11
SMPD1-203ENST00000527275 SMIM12Q96EX1 92 aa14.34□□□□□ -0.11
SMPD1-203ENST00000527275 SMAD5-AS1Q9Y6J3 95 aa14.34□□□□□ -0.11
SMPD1-203ENST00000527275 WNK1Q9H4A3 2382 aa14.34□□□□□ -0.11
SMPD1-203ENST00000527275 PHOX2AO14813 284 aa14.33□□□□□ -0.11
SMPD1-203ENST00000527275 BUB3O43684 328 aa14.33□□□□□ -0.11
SMPD1-203ENST00000527275 HIST1H2BKO60814 126 aa14.33□□□□□ -0.11
SMPD1-203ENST00000527275 HIST1H2BJP06899 126 aa14.33□□□□□ -0.11
SMPD1-203ENST00000527275 HIST1H2BOP23527 126 aa14.33□□□□□ -0.11
SMPD1-203ENST00000527275 HIST1H2BBP33778 126 aa14.33□□□□□ -0.11
SMPD1-203ENST00000527275 HIST1H2BDP58876 126 aa14.33□□□□□ -0.11
SMPD1-203ENST00000527275 HIST1H2BCP62807 126 aa14.33□□□□□ -0.11
SMPD1-203ENST00000527275 HIST2H2BEQ16778 126 aa14.33□□□□□ -0.11
SMPD1-203ENST00000527275 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.33□□□□□ -0.11
SMPD1-203ENST00000527275 UNQ9165/PRO28630Q6UXU0 137 aa14.33□□□□□ -0.11
SMPD1-203ENST00000527275 OR11H1Q8NG94 326 aa14.33□□□□□ -0.11
SMPD1-203ENST00000527275 HIST1H2BHQ93079 126 aa14.33□□□□□ -0.11
SMPD1-203ENST00000527275 DUX3Q96PT4 197 aa14.33□□□□□ -0.11
SMPD1-203ENST00000527275 HIST1H2BNQ99877 126 aa14.33□□□□□ -0.11
SMPD1-203ENST00000527275 HIST1H2BMQ99879 126 aa14.33□□□□□ -0.11
SMPD1-203ENST00000527275 LTAP01374 205 aa14.33□□□□□ -0.12
SMPD1-203ENST00000527275 TRGC1P0CF51 173 aa14.33□□□□□ -0.12
SMPD1-203ENST00000527275 PSG9Q00887 426 aa14.33□□□□□ -0.12
SMPD1-203ENST00000527275 FAM231DQ6ZW35 169 aa14.33□□□□□ -0.12
SMPD1-203ENST00000527275 MLST8Q9BVC4 326 aa14.33□□□□□ -0.12
SMPD1-203ENST00000527275 AAMDCQ9H7C9 122 aa14.33□□□□□ -0.12
SMPD1-203ENST00000527275 TRAV9-1A0A075B6T8 112 aa14.32□□□□□ -0.12
SMPD1-203ENST00000527275 TRAV8-1A0A0A6YYK1 113 aa14.32□□□□□ -0.12
SMPD1-203ENST00000527275 ZNF705GA8MUZ8 300 aaPredicted RBP14.32□□□□□ -0.12
SMPD1-203ENST00000527275 NDUFA4O00483 81 aa14.32□□□□□ -0.12
SMPD1-203ENST00000527275 PRR27Q6MZM9 219 aa14.32□□□□□ -0.12
SMPD1-203ENST00000527275 METTL26Q96S19 204 aa14.32□□□□□ -0.12
SMPD1-203ENST00000527275 ADARB2-AS1A8MUL3 147 aa14.31□□□□□ -0.12
SMPD1-203ENST00000527275 IGLV2-11P01706 119 aa14.31□□□□□ -0.12
SMPD1-203ENST00000527275 HOXD3P31249 432 aaPredicted RBP14.31□□□□□ -0.12
SMPD1-203ENST00000527275 FABP9Q0Z7S8 132 aa14.31□□□□□ -0.12
SMPD1-203ENST00000527275 NUDT10Q8NFP7 164 aa14.31□□□□□ -0.12
SMPD1-203ENST00000527275 NUDT11Q96G61 164 aa14.31□□□□□ -0.12
SMPD1-203ENST00000527275 DIRC3C9JPN6 131 aa14.3□□□□□ -0.12
SMPD1-203ENST00000527275 K7EQM0 130 aa14.3□□□□□ -0.12
SMPD1-203ENST00000527275 M0R3E3 92 aa14.3□□□□□ -0.12
SMPD1-203ENST00000527275 MEOX2P50222 304 aa14.3□□□□□ -0.12
SMPD1-203ENST00000527275 NDUFA6P56556 154 aa14.3□□□□□ -0.12
SMPD1-203ENST00000527275 GPHB5Q86YW7 130 aa14.3□□□□□ -0.12
SMPD1-203ENST00000527275 OR1N2Q8NGR9 330 aa14.3□□□□□ -0.12
SMPD1-203ENST00000527275 COL6A5A8TX70 2615 aa14.3□□□□□ -0.12
SMPD1-203ENST00000527275 UBE2CO00762 179 aa14.3□□□□□ -0.12
SMPD1-203ENST00000527275 ZNF207O43670 478 aaKnown RBP14.3□□□□□ -0.12
SMPD1-203ENST00000527275 GATCO43716 136 aaKnown RBP14.3□□□□□ -0.12
SMPD1-203ENST00000527275 PRNTQ86SH4 94 aa14.3□□□□□ -0.12
SMPD1-203ENST00000527275 IGHV3-66A0A0C4DH42 116 aa14.29□□□□□ -0.12
SMPD1-203ENST00000527275 TRBV6-1A0A0K0K1D8 114 aa14.29□□□□□ -0.12
SMPD1-203ENST00000527275 ZNF785A8K8V0 405 aa14.29□□□□□ -0.12
SMPD1-203ENST00000527275 LINC01619G3V211 115 aa14.29□□□□□ -0.12
SMPD1-203ENST00000527275 APOHP02749 345 aaPredicted RBP14.29□□□□□ -0.12
SMPD1-203ENST00000527275 NSUN5P1Q3KNT7 163 aa14.29□□□□□ -0.12
SMPD1-203ENST00000527275 FAM106AQ4KMX7 169 aa14.29□□□□□ -0.12
SMPD1-203ENST00000527275 C1orf194Q5T5A4 169 aa14.29□□□□□ -0.12
SMPD1-203ENST00000527275 Q86TA4 180 aa14.29□□□□□ -0.12
SMPD1-203ENST00000527275 TMEM75Q8N9X5 138 aa14.29□□□□□ -0.12
SMPD1-203ENST00000527275 DPF1Q92782 380 aa14.29□□□□□ -0.12
SMPD1-203ENST00000527275 RAX2Q96IS3 184 aa14.29□□□□□ -0.12
SMPD1-203ENST00000527275 ZNF253O75346 499 aa14.29□□□□□ -0.12
SMPD1-203ENST00000527275 CSN1S1P47710 185 aa14.29□□□□□ -0.12
SMPD1-203ENST00000527275 SLURP1P55000 103 aa14.29□□□□□ -0.12
SMPD1-203ENST00000527275 ACTL10Q5JWF8 245 aa14.29□□□□□ -0.12
SMPD1-203ENST00000527275 TMEM183AQ8IXX5 376 aa14.29□□□□□ -0.12
SMPD1-203ENST00000527275 IGHV3OR16-13A0A075B7E8 117 aa14.28□□□□□ -0.12
SMPD1-203ENST00000527275 IGHV3-74A0A0B4J1X5 117 aa14.28□□□□□ -0.12
SMPD1-203ENST00000527275 SMIM27A0A1W2PRY6 76 aa14.28□□□□□ -0.12
SMPD1-203ENST00000527275 PRB4P10163 310 aaPredicted RBP14.28□□□□□ -0.12
SMPD1-203ENST00000527275 SYNJ2BPP57105 145 aa14.28□□□□□ -0.12
SMPD1-203ENST00000527275 U3KQE9 123 aa14.28□□□□□ -0.12
SMPD1-203ENST00000527275 IGHV3-49A0A0A0MS15 119 aa14.27□□□□□ -0.12
SMPD1-203ENST00000527275 CCL24O00175 119 aa14.27□□□□□ -0.12
SMPD1-203ENST00000527275 CA1P00915 261 aaPredicted RBP14.27□□□□□ -0.12
SMPD1-203ENST00000527275 PSG3Q16557 428 aa14.27□□□□□ -0.12
SMPD1-203ENST00000527275 NDUFA11Q86Y39 141 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms