RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 HLA-DRB4P13762 266 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 ID1P41134 155 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 MEOX2P50222 304 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 LYZP61626 148 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 B2MP61769 119 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 PSG9Q00887 426 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 ZNF90Q03938 601 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 C1orf194Q5T5A4 169 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 FAM78BQ5VT40 261 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 SAMD13Q5VXD3 122 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 EIF5AL1Q6IS14 154 aaKnown RBP4.65□□□□□ -1.67
CD44-221ENST00000526000 OR11H4Q8NGC9 324 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 OR2G3Q8NGZ4 309 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 STOML3Q8TAV4 291 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 C20orf173Q96LM9 149 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 GPR82Q96P67 336 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 NEU1Q99519 415 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 MGST2Q99735 147 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 TMEM208Q9BTX3 173 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 ARL6Q9H0F7 186 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 GOLT1BQ9Y3E0 138 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 HLA-DRB4X5D2U9 266 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 DNAH11Q96DT5 4516 aa4.65□□□□□ -1.67
CD44-221ENST00000526000 TMEM189A5PLL7 270 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 SMIM9A6NGZ8 99 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 SMLR1H3BR10 107 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 COX7A2P2O60397 106 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 HTN1P15515 57 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 RRN3P1Q2M238 152 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 RNF212Q495C1 297 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 EBLN2Q6P2I7 272 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 TMUB2Q71RG4 321 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 SLC51BQ86UW2 128 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 UHRF2Q96PU4 802 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 MRPL32Q9BYC8 188 aaKnown RBP4.64□□□□□ -1.67
CD44-221ENST00000526000 ARV1Q9H2C2 271 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 SAV1Q9H4B6 383 aaPredicted RBP4.64□□□□□ -1.67
CD44-221ENST00000526000 WFDC1Q9HC57 220 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 DNAJC4Q9NNZ3 241 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 SCRT2Q9NQ03 307 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 SLC39A9Q9NUM3 307 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 HIGD1AQ9Y241 93 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 PXMP4Q9Y6I8 212 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 DNAH2Q9P225 4427 aa4.64□□□□□ -1.67
CD44-221ENST00000526000 NBDYA0A0U1RRE5 68 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 UMAD1C9J7I0 102 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 M0R2Z0 102 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 SEC11BP0C7V7 166 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 TPT1P13693 172 aaKnown RBP4.63□□□□□ -1.67
CD44-221ENST00000526000 RPL7P18124 248 aaKnown RBP4.63□□□□□ -1.67
CD44-221ENST00000526000 CXCL2P19875 107 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 AZU1P20160 251 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 M6PRP20645 277 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 FUSP35637 526 aaKnown RBP eCLIP4.63□□□□□ -1.67
CD44-221ENST00000526000 ACOT6Q3I5F7 207 aaPredicted RBP4.63□□□□□ -1.67
CD44-221ENST00000526000 RPL7L1Q6DKI1 246 aaKnown RBP4.63□□□□□ -1.67
CD44-221ENST00000526000 FOXI2Q6ZQN5 318 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 SPATA12Q7Z6I5 190 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 BAP18Q8IXM2 172 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 OR8I2Q8N0Y5 310 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 C6orf223Q8N319 242 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 FAM210BQ96KR6 192 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 C16orf92Q96LL3 132 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 SHANK2-AS3Q9BTD1 123 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 RSG1Q9BU20 258 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 ZNF471Q9BX82 626 aaPredicted RBP4.63□□□□□ -1.67
CD44-221ENST00000526000 SMIM3Q9BZL3 60 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 SLC25A22Q9H936 323 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 SEPSECSQ9HD40 501 aaKnown RBP4.63□□□□□ -1.67
CD44-221ENST00000526000 CYTL1Q9NRR1 136 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 FAT2Q9NYQ8 4349 aa4.63□□□□□ -1.67
CD44-221ENST00000526000 TRAV12-2A0A075B6T6 113 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 A0A0J9YX75 114 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 ZNF98A6NK75 572 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 H3BRN7 92 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 OR5G3P0C626 314 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 ORM2P19652 201 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 GATA2P23769 480 aaPredicted RBP4.62□□□□□ -1.67
CD44-221ENST00000526000 ATP6V0CP27449 155 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 GALR1P47211 349 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 RAB5CP51148 216 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 TAS2R45P59539 299 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 RHOBP62745 196 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 SPINK13Q1W4C9 94 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 LGALSLQ3ZCW2 172 aaPredicted RBP4.62□□□□□ -1.67
CD44-221ENST00000526000 FFAR4Q5NUL3 377 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 C10orf113Q5VZT2 155 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 MIC13Q5XKP0 118 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 DPPA3Q6W0C5 159 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 BPIFA4PQ86YQ2 179 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 C9orf62Q8N4C0 152 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 HSD17B11Q8NBQ5 300 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 OR1B1Q8NGR6 318 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 PHYHIPLQ96FC7 376 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 SLC25A39Q9BZJ4 359 aaPredicted RBP4.62□□□□□ -1.67
CD44-221ENST00000526000 LINC00588Q9Y4M8 146 aa4.62□□□□□ -1.67
CD44-221ENST00000526000 A0A087X0K7 114 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 A0A1W2PPV4 95 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 SOCS3O14543 225 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 SNRPCP09234 159 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms