RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 BLNKQ8WV28 456 aa12.96□□□□□ -0.33
PACSIN3-202ENST00000524509 ASCL2Q99929 193 aa12.96□□□□□ -0.33
PACSIN3-202ENST00000524509 TMEM167BQ9NRX6 74 aa12.96□□□□□ -0.33
PACSIN3-202ENST00000524509 TP53TG1Q9Y2A0 90 aa12.96□□□□□ -0.33
PACSIN3-202ENST00000524509 DNAH1Q9P2D7 4330 aa12.96□□□□□ -0.33
PACSIN3-202ENST00000524509 A0A0J9YX75 114 aa12.95□□□□□ -0.34
PACSIN3-202ENST00000524509 KNCNA6PVL3 124 aa12.95□□□□□ -0.34
PACSIN3-202ENST00000524509 CSN1S1P47710 185 aa12.95□□□□□ -0.34
PACSIN3-202ENST00000524509 OR10J6PQ8NGY7 276 aa12.95□□□□□ -0.34
PACSIN3-202ENST00000524509 RPUSD4Q96CM3 377 aaKnown RBP12.95□□□□□ -0.34
PACSIN3-202ENST00000524509 FXYD5Q96DB9 178 aa12.95□□□□□ -0.34
PACSIN3-202ENST00000524509 TM2D3Q9BRN9 247 aa12.95□□□□□ -0.34
PACSIN3-202ENST00000524509 HUWE1Q7Z6Z7 4374 aaKnown RBP12.95□□□□□ -0.34
PACSIN3-202ENST00000524509 AMBPP02760 352 aa12.94□□□□□ -0.34
PACSIN3-202ENST00000524509 OR10J4P0C629 311 aa12.94□□□□□ -0.34
PACSIN3-202ENST00000524509 ZNF124Q15973 351 aa12.94□□□□□ -0.34
PACSIN3-202ENST00000524509 ARL6IP6Q8N6S5 226 aa12.94□□□□□ -0.34
PACSIN3-202ENST00000524509 RXFP4Q8TDU9 374 aa12.94□□□□□ -0.34
PACSIN3-202ENST00000524509 PPP1R14DQ9NXH3 145 aa12.94□□□□□ -0.34
PACSIN3-202ENST00000524509 RFNGQ9Y644 331 aa12.94□□□□□ -0.34
PACSIN3-202ENST00000524509 TEX46H3BTG2 121 aa12.93□□□□□ -0.34
PACSIN3-202ENST00000524509 ARL14EPLP0DKL9 152 aa12.93□□□□□ -0.34
PACSIN3-202ENST00000524509 C9orf62Q8N4C0 152 aa12.93□□□□□ -0.34
PACSIN3-202ENST00000524509 RNF182Q8N6D2 247 aa12.93□□□□□ -0.34
PACSIN3-202ENST00000524509 OR4B1Q8NGF8 309 aa12.93□□□□□ -0.34
PACSIN3-202ENST00000524509 OR8A1Q8NGG7 326 aa12.93□□□□□ -0.34
PACSIN3-202ENST00000524509 C20orf173Q96LM9 149 aa12.93□□□□□ -0.34
PACSIN3-202ENST00000524509 LYSTQ99698 3801 aa12.92□□□□□ -0.34
PACSIN3-202ENST00000524509 SLC17A3O00476 420 aa12.92□□□□□ -0.34
PACSIN3-202ENST00000524509 CA1P00915 261 aaPredicted RBP12.92□□□□□ -0.34
PACSIN3-202ENST00000524509 PHYHIPLQ96FC7 376 aa12.92□□□□□ -0.34
PACSIN3-202ENST00000524509 NKX6-2Q9C056 277 aaPredicted RBP12.92□□□□□ -0.34
PACSIN3-202ENST00000524509 H3BTX0 84 aa12.91□□□□□ -0.34
PACSIN3-202ENST00000524509 NDUFB4O95168 129 aa12.91□□□□□ -0.34
PACSIN3-202ENST00000524509 SNRPCP09234 159 aaKnown RBP12.91□□□□□ -0.34
PACSIN3-202ENST00000524509 GCHFRP30047 84 aa12.91□□□□□ -0.34
PACSIN3-202ENST00000524509 RANP62826 216 aaKnown RBP12.91□□□□□ -0.34
PACSIN3-202ENST00000524509 IGFL4Q6B9Z1 124 aa12.91□□□□□ -0.34
PACSIN3-202ENST00000524509 CMTM2Q8TAZ6 248 aa12.91□□□□□ -0.34
PACSIN3-202ENST00000524509 ZNF503Q96F45 646 aa12.91□□□□□ -0.34
PACSIN3-202ENST00000524509 RCHY1Q96PM5 261 aa12.91□□□□□ -0.34
PACSIN3-202ENST00000524509 OTORQ9NRC9 128 aa12.91□□□□□ -0.34
PACSIN3-202ENST00000524509 A8MTW9 85 aa12.9□□□□□ -0.34
PACSIN3-202ENST00000524509 SPRY2O43597 315 aa12.9□□□□□ -0.34
PACSIN3-202ENST00000524509 TSPOP30536 169 aa12.9□□□□□ -0.34
PACSIN3-202ENST00000524509 HIST1H1AQ02539 215 aaPredicted RBP12.9□□□□□ -0.34
PACSIN3-202ENST00000524509 CD300CQ08708 224 aa12.9□□□□□ -0.34
PACSIN3-202ENST00000524509 ICAM4Q14773 271 aa12.9□□□□□ -0.34
PACSIN3-202ENST00000524509 SUN5Q8TC36 379 aa12.9□□□□□ -0.34
PACSIN3-202ENST00000524509 TMED6Q8WW62 240 aa12.9□□□□□ -0.34
PACSIN3-202ENST00000524509 Q9H3A6 140 aa12.9□□□□□ -0.34
PACSIN3-202ENST00000524509 MAP1LC3B2A6NCE7 125 aa12.89□□□□□ -0.35
PACSIN3-202ENST00000524509 HMGB3O15347 200 aaKnown RBP12.89□□□□□ -0.35
PACSIN3-202ENST00000524509 PPT1P50897 306 aa12.89□□□□□ -0.35
PACSIN3-202ENST00000524509 CNN1P51911 297 aaKnown RBP12.89□□□□□ -0.35
PACSIN3-202ENST00000524509 IQCF2Q8IXL9 164 aa12.89□□□□□ -0.35
PACSIN3-202ENST00000524509 RNF183Q96D59 192 aa12.89□□□□□ -0.35
PACSIN3-202ENST00000524509 LINC00477Q96M19 166 aa12.89□□□□□ -0.35
PACSIN3-202ENST00000524509 MAP1LC3BQ9GZQ8 125 aa12.89□□□□□ -0.35
PACSIN3-202ENST00000524509 SERTM2A0A1B0GWG4 89 aa12.88□□□□□ -0.35
PACSIN3-202ENST00000524509 GDF5OSQ5U4N7 250 aa12.88□□□□□ -0.35
PACSIN3-202ENST00000524509 EXOC3-AS1Q8N2X6 119 aa12.88□□□□□ -0.35
PACSIN3-202ENST00000524509 FAM213BQ8TBF2 198 aa12.88□□□□□ -0.35
PACSIN3-202ENST00000524509 ODF3Q96PU9 254 aa12.88□□□□□ -0.35
PACSIN3-202ENST00000524509 A0A1W2PRE2 83 aa12.87□□□□□ -0.35
PACSIN3-202ENST00000524509 RBAKDNA6NC62 111 aa12.87□□□□□ -0.35
PACSIN3-202ENST00000524509 PGPA6NDG6 321 aa12.87□□□□□ -0.35
PACSIN3-202ENST00000524509 ZNF705FA8MVS1 300 aaPredicted RBP12.87□□□□□ -0.35
PACSIN3-202ENST00000524509 F6UB75 175 aa12.87□□□□□ -0.35
PACSIN3-202ENST00000524509 K7EQM0 130 aa12.87□□□□□ -0.35
PACSIN3-202ENST00000524509 SLC25A5P05141 298 aaKnown RBP12.87□□□□□ -0.35
PACSIN3-202ENST00000524509 H2AFB1P0C5Y9 115 aa12.87□□□□□ -0.35
PACSIN3-202ENST00000524509 HLA-DMBP28068 263 aa12.87□□□□□ -0.35
PACSIN3-202ENST00000524509 TMEM78Q5T7P6 136 aa12.87□□□□□ -0.35
PACSIN3-202ENST00000524509 SFT2D1Q8WV19 159 aa12.87□□□□□ -0.35
PACSIN3-202ENST00000524509 MBD3L1Q8WWY6 194 aa12.87□□□□□ -0.35
PACSIN3-202ENST00000524509 ARL2-SNX15V9GYD0 113 aa12.87□□□□□ -0.35
PACSIN3-202ENST00000524509 IGKV3-20P01619 116 aa12.86□□□□□ -0.35
PACSIN3-202ENST00000524509 HBE1P02100 147 aa12.86□□□□□ -0.35
PACSIN3-202ENST00000524509 SULT1A2P50226 295 aa12.86□□□□□ -0.35
PACSIN3-202ENST00000524509 ZNF726P1Q15940 193 aa12.86□□□□□ -0.35
PACSIN3-202ENST00000524509 DEFB135Q30KP9 77 aa12.86□□□□□ -0.35
PACSIN3-202ENST00000524509 CSMD3Q7Z407 3707 aa12.85□□□□□ -0.35
PACSIN3-202ENST00000524509 TRBV7-9A0A0J9YWB2 115 aa12.85□□□□□ -0.35
PACSIN3-202ENST00000524509 FBLL1A6NHQ2 334 aaKnown RBP12.85□□□□□ -0.35
PACSIN3-202ENST00000524509 NPIPB6E9PJ23 425 aa12.85□□□□□ -0.35
PACSIN3-202ENST00000524509 BOLA2-SMG1P6H3BVE0 249 aa12.85□□□□□ -0.35
PACSIN3-202ENST00000524509 M0R3E3 92 aa12.85□□□□□ -0.35
PACSIN3-202ENST00000524509 LEPP41159 167 aa12.85□□□□□ -0.35
PACSIN3-202ENST00000524509 C9orf47Q6ZRZ4 202 aa12.85□□□□□ -0.35
PACSIN3-202ENST00000524509 C5orf17Q8NAS9 161 aa12.85□□□□□ -0.35
PACSIN3-202ENST00000524509 OVOL2Q9BRP0 275 aa12.85□□□□□ -0.35
PACSIN3-202ENST00000524509 TCEAL7Q9BRU2 100 aa12.85□□□□□ -0.35
PACSIN3-202ENST00000524509 KRTAP17-1Q9BYP8 105 aa12.85□□□□□ -0.35
PACSIN3-202ENST00000524509 GOLT1BQ9Y3E0 138 aa12.85□□□□□ -0.35
PACSIN3-202ENST00000524509 NMBP08949 121 aa12.84□□□□□ -0.35
PACSIN3-202ENST00000524509 CDKN1BP46527 198 aa12.84□□□□□ -0.35
PACSIN3-202ENST00000524509 IGF2BP2-AS1Q96M15 143 aa12.84□□□□□ -0.35
PACSIN3-202ENST00000524509 RARRES2Q99969 163 aa12.84□□□□□ -0.35
PACSIN3-202ENST00000524509 C20orf144Q9BQM9 153 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms