RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, human

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS13B-208	ENST00000521037	IFNA17	P01571	189 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	IGLV2-11	P01706	119 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	RCC1	P18754	421 aa	Predicted RBP	2.58	□□□□□ -2
VPS13B-208	ENST00000521037	GABRR1	P24046	479 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	GLP1R	P43220	463 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	KCNJ3	P48549	501 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	SULT1A2	P50226	295 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	RPL32	P62910	135 aa	Known RBP	2.58	□□□□□ -2
VPS13B-208	ENST00000521037	GRB2	P62993	217 aa	Known RBP	2.58	□□□□□ -2
VPS13B-208	ENST00000521037	PPP1R1A	Q13522	171 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	SMCO1	Q147U7	214 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	MMD	Q15546	238 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	ZNF506	Q5JVG8	444 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	FAAP20	Q6NZ36	180 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	SLC16A13	Q7RTY0	426 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	TMED4	Q7Z7H5	227 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	TRAPPC6B	Q86SZ2	158 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	PPP1R27	Q86WC6	154 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	LINC00469	Q8N7U9	141 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	UBAC2	Q8NBM4	344 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	OR13C8	Q8NGS7	320 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	OR6N2	Q8NGY6	317 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	LYPD6B	Q8NI32	183 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	CPNE2	Q96FN4	548 aa	Predicted RBP	2.58	□□□□□ -2
VPS13B-208	ENST00000521037	C2orf50	Q96LR7	162 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	S100A13	Q99584	98 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	CHCHD5	Q9BSY4	110 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	PBDC1	Q9BVG4	233 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	TMEM59	Q9BXS4	323 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	ACTR3C	Q9C0K3	210 aa	Predicted RBP	2.58	□□□□□ -2
VPS13B-208	ENST00000521037	CST11	Q9H112	138 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	FBXL15	Q9H469	300 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	JPT2	Q9H910	190 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	RHOF	Q9HBH0	211 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037		V9GYS6	101 aa		2.58	□□□□□ -2
VPS13B-208	ENST00000521037	IGLV7-46	A0A075B6I9	117 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	2.57	□□□□□ -2
VPS13B-208	ENST00000521037	BORCS7-ASMT	A0A0B4J1R7	106 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	LOC107986453	A0A1B0GWG9	222 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	COLCA2	A8K830	154 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	TMEM14DP	A8MWL7	114 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	UMAD1	C9J7I0	102 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037		H3BUA1	57 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	GPR31	O00270	319 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	SOCS3	O14543	225 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	HSBP1	O75506	76 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	SFT2D2	O95562	160 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	NRAS	P01111	189 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	IFNA21	P01568	189 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	TTR	P02766	147 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	FABP1	P07148	127 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	SEC11B	P0C7V7	166 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	PGAM2	P15259	253 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	PMCH	P20382	165 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	MAS1L	P35410	378 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	RPL35	P42766	123 aa	Known RBP	2.57	□□□□□ -2
VPS13B-208	ENST00000521037	POLR2G	P62487	172 aa	Known RBP eCLIP	2.57	□□□□□ -2
VPS13B-208	ENST00000521037	RSU1	Q15404	277 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	LTC4S	Q16873	150 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	RPEL1	Q2QD12	228 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	SCGB2B2	Q4G0G5	96 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	FAM74A1	Q5RGS3	127 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	OR10K2	Q6IF99	312 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	UNQ5815/PRO19632	Q6UWF5	114 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	UNQ9165/PRO28630	Q6UXU0	137 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037		Q6ZSA8	131 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037		Q8NBF4	154 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	OR4D6	Q8NGJ1	314 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	OR10R2	Q8NGX6	335 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	OR4K15	Q8NH41	348 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	OR51E1	Q8TCB6	317 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	RXFP4	Q8TDU9	374 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	GALNT14	Q96FL9	552 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	ABHD14B	Q96IU4	210 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	SULT4A1	Q9BR01	284 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	MRPL20	Q9BYC9	149 aa	Known RBP	2.57	□□□□□ -2
VPS13B-208	ENST00000521037	SELENOI	Q9C0D9	397 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	ARV1	Q9H2C2	271 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	TAF9B	Q9HBM6	251 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	GPR84	Q9NQS5	396 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	CYTL1	Q9NRR1	136 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	OR1A1	Q9P1Q5	309 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037	OR52A1	Q9UKL2	312 aa		2.57	□□□□□ -2
VPS13B-208	ENST00000521037		A0A087WWC5	75 aa		2.56	□□□□□ -2
VPS13B-208	ENST00000521037	TMEM269	A0A1B0GVZ9	245 aa		2.56	□□□□□ -2
VPS13B-208	ENST00000521037	FAM231B	A6NCW3	169 aa		2.56	□□□□□ -2
VPS13B-208	ENST00000521037	TMEM235	A6NFC5	223 aa		2.56	□□□□□ -2
VPS13B-208	ENST00000521037	RPL37AP8	A6NKH3	93 aa		2.56	□□□□□ -2
VPS13B-208	ENST00000521037	DHRS7C	A6NNS2	312 aa		2.56	□□□□□ -2
VPS13B-208	ENST00000521037		B4DEV8	164 aa		2.56	□□□□□ -2
VPS13B-208	ENST00000521037	PPP5D1	E7EU14	171 aa		2.56	□□□□□ -2
VPS13B-208	ENST00000521037		K7EPK0	472 aa		2.56	□□□□□ -2
VPS13B-208	ENST00000521037	NDUFS6	O75380	124 aa	Known RBP	2.56	□□□□□ -2
VPS13B-208	ENST00000521037	MED6	O75586	246 aa		2.56	□□□□□ -2
VPS13B-208	ENST00000521037	EIF3G	O75821	320 aa	Known RBP eCLIP	2.56	□□□□□ -2
VPS13B-208	ENST00000521037	GLA	P06280	429 aa		2.56	□□□□□ -2
VPS13B-208	ENST00000521037	CTSD	P07339	412 aa	Predicted RBP	2.56	□□□□□ -2
VPS13B-208	ENST00000521037	SFTA3	P0C7M3	94 aa		2.56	□□□□□ -2
VPS13B-208	ENST00000521037	DNAH10OS	P0CZ25	163 aa		2.56	□□□□□ -2
VPS13B-208	ENST00000521037	PTHLH	P12272	177 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms