RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 NPY1RP25929 384 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 CDC34P49427 236 aaPredicted RBP4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 CMC4P56277 68 aaPredicted RBP4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 RPL19P84098 196 aaKnown RBP4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 UBE2V1Q13404 147 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 RAB31Q13636 194 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 AARDQ4LEZ3 155 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 PDLIM3Q53GG5 364 aaPredicted RBP4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 OR10J3Q5JRS4 329 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 SPANXN5Q5MJ07 72 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 FFAR4Q5NUL3 377 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 SAMD13Q5VXD3 122 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 CST9LP1Q5W188 147 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 GTSCR1Q86UQ5 136 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 MYOZ3Q8TDC0 251 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 WIPF2Q8TF74 440 aaPredicted RBP4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 GATAD1Q8WUU5 269 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 CACNG8Q8WXS5 425 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 SFRP2Q96HF1 295 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 RITA1Q96K30 269 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 SLC25A22Q9H936 323 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 TECRQ9NZ01 308 aaKnown RBP4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 IGLV11-55A0A075B6I3 123 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 IGLC7A0M8Q6 106 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 TEX22C9J3V5 150 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 C9JCJ5 164 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 DIRC3C9JPN6 131 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 NDUFA4O00483 81 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 ZNF253O75346 499 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 SAP30O75446 220 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 OR2J3O76001 311 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 IGHV3-11P01762 117 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 PPBPP02775 128 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 GPX1P07203 203 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 OR5G3P0C626 314 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 OR10J4P0C629 311 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 IGLC2P0DOY2 106 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 IGLC3P0DOY3 106 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 HOXD3P31249 432 aaPredicted RBP4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 FCGR2BP31994 310 aaPredicted RBP4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 LINC00205P59089 165 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 UBE2G2P60604 165 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 SUMO1P63165 101 aaKnown RBP4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 NDPQ00604 133 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 FHL3Q13643 280 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 TDRG1Q3Y452 100 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 C2orf83Q53S99 150 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 C19orf54Q5BKX5 351 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 WDR73Q6P4I2 378 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 Q6ZS46 218 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 C19orf35Q6ZS72 473 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 STPG4Q8N801 248 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 ZNF709Q8N972 641 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 WFDC9Q8NEX5 89 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 OR10P1Q8NGE3 313 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 C11orf52Q96A22 123 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 GPHA2Q96T91 129 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 NPCDR1Q9BY65 106 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 GNB1LQ9BYB4 327 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 MRPL18Q9H0U6 180 aaKnown RBP4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 WDR83OSQ9Y284 106 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 LAMTOR2Q9Y2Q5 125 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 PAM16Q9Y3D7 125 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 ARL2-SNX15V9GYD0 113 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 SVEP1Q4LDE5 3571 aa4.37□□□□□ -1.71
CTNNA1-220ENST00000520260 LINC01548A6NM66 108 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 LGALS9O00182 355 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 BMPR1BO00238 502 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 CCL25O15444 150 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 MPDU1O75352 247 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 HYPMO75409 117 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 NDUFB4O95168 129 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 APELAP0DMC3 54 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 EGR2P11161 476 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 AREGP15514 252 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 ATP5G3P48201 142 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 HNRNPA3P51991 378 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 PTTG1IPP53801 180 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 BRWD1-AS2P59051 145 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 RHOBP62745 196 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 ZNF90Q03938 601 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 TNP2Q05952 138 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 PMCHL1Q16048 86 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 IZUMO4Q1ZYL8 232 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 KLK9Q2XQG4 91 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 SPATA45Q537H7 98 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 C10orf55Q5SWW7 151 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 OR8G2PQ6IF36 304 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 RBPMS2Q6ZRY4 209 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 BAGE3Q86Y29 109 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 BAGE2Q86Y30 109 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 GPHB5Q86YW7 130 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 LINC00482Q8N8I6 264 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 ZNF738Q8NE65 137 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 OR9G4Q8NGQ1 327 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 RNASE8Q8TDE3 154 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 RAX2Q96IS3 184 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 SAMD10Q9BYL1 202 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 DAZ1Q9NQZ3 744 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 SIGLEC8Q9NYZ4 499 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms