RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 SLAQ13239 276 aa8.33□□□□□ -1.08
TRAPPC9-204ENST00000518723 CTF1Q16619 201 aa8.33□□□□□ -1.08
TRAPPC9-204ENST00000518723 ZBTB8BQ8NAP8 495 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC9-204ENST00000518723 ST6GAL2Q96JF0 529 aa8.33□□□□□ -1.08
TRAPPC9-204ENST00000518723 ARL6Q9H0F7 186 aa8.33□□□□□ -1.08
TRAPPC9-204ENST00000518723 ARV1Q9H2C2 271 aa8.33□□□□□ -1.08
TRAPPC9-204ENST00000518723 PRO0255Q9UI72 69 aa8.33□□□□□ -1.08
TRAPPC9-204ENST00000518723 IGLV5-52A0A0A0MRZ9 124 aa8.32□□□□□ -1.08
TRAPPC9-204ENST00000518723 LINC00854A0A1B0GVQ3 168 aa8.32□□□□□ -1.08
TRAPPC9-204ENST00000518723 SMCO3A2RU48 225 aa8.32□□□□□ -1.08
TRAPPC9-204ENST00000518723 J3KRW8 73 aa8.32□□□□□ -1.08
TRAPPC9-204ENST00000518723 RGS5O15539 181 aa8.32□□□□□ -1.08
TRAPPC9-204ENST00000518723 SPINK4O60575 86 aa8.32□□□□□ -1.08
TRAPPC9-204ENST00000518723 MRPL23Q16540 153 aaKnown RBP8.32□□□□□ -1.08
TRAPPC9-204ENST00000518723 ANXA2RQ3ZCQ2 193 aa8.32□□□□□ -1.08
TRAPPC9-204ENST00000518723 TMEM128Q5BJH2 165 aa8.32□□□□□ -1.08
TRAPPC9-204ENST00000518723 PXDC1Q5TGL8 231 aa8.32□□□□□ -1.08
TRAPPC9-204ENST00000518723 TEPPQ6URK8 271 aa8.32□□□□□ -1.08
TRAPPC9-204ENST00000518723 NEGR1Q7Z3B1 354 aa8.32□□□□□ -1.08
TRAPPC9-204ENST00000518723 RABL2AQ9UBK7 228 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC9-204ENST00000518723 RABL2BQ9UNT1 228 aa8.32□□□□□ -1.08
TRAPPC9-204ENST00000518723 PXMP4Q9Y6I8 212 aa8.32□□□□□ -1.08
TRAPPC9-204ENST00000518723 LRP1Q07954 4544 aaKnown RBP8.31□□□□□ -1.08
TRAPPC9-204ENST00000518723 LRCOL1A6NCL2 159 aa8.31□□□□□ -1.08
TRAPPC9-204ENST00000518723 SLC17A3O00476 420 aa8.31□□□□□ -1.08
TRAPPC9-204ENST00000518723 CTDSP2O14595 271 aa8.31□□□□□ -1.08
TRAPPC9-204ENST00000518723 C1QBP02746 253 aa8.31□□□□□ -1.08
TRAPPC9-204ENST00000518723 PLA2G1BP04054 148 aaKnown RBP8.31□□□□□ -1.08
TRAPPC9-204ENST00000518723 SLC25A5P05141 298 aaKnown RBP8.31□□□□□ -1.08
TRAPPC9-204ENST00000518723 EVI2AP22794 236 aa8.31□□□□□ -1.08
TRAPPC9-204ENST00000518723 CRYBA4P53673 196 aa8.31□□□□□ -1.08
TRAPPC9-204ENST00000518723 TCL1AP56279 114 aa8.31□□□□□ -1.08
TRAPPC9-204ENST00000518723 BPIFA4PQ86YQ2 179 aa8.31□□□□□ -1.08
TRAPPC9-204ENST00000518723 SYT8Q8NBV8 401 aa8.31□□□□□ -1.08
TRAPPC9-204ENST00000518723 DEFB104AQ8WTQ1 72 aa8.31□□□□□ -1.08
TRAPPC9-204ENST00000518723 SAT2Q96F10 170 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC9-204ENST00000518723 NAA50Q9GZZ1 169 aaKnown RBP8.31□□□□□ -1.08
TRAPPC9-204ENST00000518723 MCUBQ9NWR8 336 aa8.31□□□□□ -1.08
TRAPPC9-204ENST00000518723 C7orf71A4D174 169 aa8.3□□□□□ -1.08
TRAPPC9-204ENST00000518723 FNDC10F2Z333 226 aa8.3□□□□□ -1.08
TRAPPC9-204ENST00000518723 SNRPCP09234 159 aaKnown RBP8.3□□□□□ -1.08
TRAPPC9-204ENST00000518723 IGLC2P0DOY2 106 aa8.3□□□□□ -1.08
TRAPPC9-204ENST00000518723 IL18Q14116 193 aa8.3□□□□□ -1.08
TRAPPC9-204ENST00000518723 IBA57Q5T440 356 aaKnown RBP8.3□□□□□ -1.08
TRAPPC9-204ENST00000518723 LINC00305Q7Z4B0 112 aa8.3□□□□□ -1.08
TRAPPC9-204ENST00000518723 WFDC10BQ8IUB3 73 aa8.3□□□□□ -1.08
TRAPPC9-204ENST00000518723 C10orf126Q8N4M7 172 aa8.3□□□□□ -1.08
TRAPPC9-204ENST00000518723 EIF4E3Q8N5X7 224 aaKnown RBP8.3□□□□□ -1.08
TRAPPC9-204ENST00000518723 VGLL1Q99990 258 aa8.3□□□□□ -1.08
TRAPPC9-204ENST00000518723 NPVFQ9HCQ7 196 aa8.3□□□□□ -1.08
TRAPPC9-204ENST00000518723 FAM30AQ9NZY2 134 aa8.3□□□□□ -1.08
TRAPPC9-204ENST00000518723 HHLA3Q9XRX5 114 aa8.3□□□□□ -1.08
TRAPPC9-204ENST00000518723 KLF12Q9Y4X4 402 aa8.3□□□□□ -1.08
TRAPPC9-204ENST00000518723 KLLNB2CW77 178 aa8.29□□□□□ -1.08
TRAPPC9-204ENST00000518723 IGHV3-53P01767 116 aa8.29□□□□□ -1.08
TRAPPC9-204ENST00000518723 VAMP1P23763 118 aa8.29□□□□□ -1.08
TRAPPC9-204ENST00000518723 ID3Q02535 119 aa8.29□□□□□ -1.08
TRAPPC9-204ENST00000518723 FHL2Q14192 279 aa8.29□□□□□ -1.08
TRAPPC9-204ENST00000518723 H3BQ15 152 aa8.28□□□□□ -1.08
TRAPPC9-204ENST00000518723 H3BTX0 84 aa8.28□□□□□ -1.08
TRAPPC9-204ENST00000518723 PRAF2O60831 178 aa8.28□□□□□ -1.08
TRAPPC9-204ENST00000518723 CRYGDP07320 174 aa8.28□□□□□ -1.08
TRAPPC9-204ENST00000518723 RRAS2P62070 204 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC9-204ENST00000518723 SLC38A11Q08AI6 406 aa8.28□□□□□ -1.08
TRAPPC9-204ENST00000518723 GUK1Q16774 197 aa8.28□□□□□ -1.08
TRAPPC9-204ENST00000518723 ZNF546Q86UE3 836 aa8.28□□□□□ -1.08
TRAPPC9-204ENST00000518723 MRPL53Q96EL3 112 aaKnown RBP8.28□□□□□ -1.08
TRAPPC9-204ENST00000518723 DIRAS2Q96HU8 199 aa8.28□□□□□ -1.08
TRAPPC9-204ENST00000518723 C8orf49Q96NF6 230 aa8.28□□□□□ -1.08
TRAPPC9-204ENST00000518723 MRPL32Q9BYC8 188 aaKnown RBP8.28□□□□□ -1.08
TRAPPC9-204ENST00000518723 PSENENQ9NZ42 101 aa8.28□□□□□ -1.08
TRAPPC9-204ENST00000518723 K7EQD1 137 aa8.27□□□□□ -1.09
TRAPPC9-204ENST00000518723 SFT2D2O95562 160 aa8.27□□□□□ -1.09
TRAPPC9-204ENST00000518723 HOXB5P09067 269 aa8.27□□□□□ -1.09
TRAPPC9-204ENST00000518723 SRIP30626 198 aa8.27□□□□□ -1.09
TRAPPC9-204ENST00000518723 POLR2GP62487 172 aaKnown RBP eCLIP8.27□□□□□ -1.09
TRAPPC9-204ENST00000518723 OPCMLQ14982 345 aa8.27□□□□□ -1.09
TRAPPC9-204ENST00000518723 MORN5Q5VZ52 161 aa8.27□□□□□ -1.09
TRAPPC9-204ENST00000518723 TMEM14EPQ6UXP3 125 aa8.27□□□□□ -1.09
TRAPPC9-204ENST00000518723 Q6ZSA8 131 aa8.27□□□□□ -1.09
TRAPPC9-204ENST00000518723 Q8N814 137 aa8.27□□□□□ -1.09
TRAPPC9-204ENST00000518723 TMEM37Q8WXS4 190 aa8.27□□□□□ -1.09
TRAPPC9-204ENST00000518723 FAM19A4Q96LR4 140 aa8.27□□□□□ -1.09
TRAPPC9-204ENST00000518723 RSL24D1Q9UHA3 163 aaKnown RBP8.27□□□□□ -1.09
TRAPPC9-204ENST00000518723 FAT3Q8TDW7 4589 aa8.27□□□□□ -1.09
TRAPPC9-204ENST00000518723 GOSR2O14653 212 aa8.26□□□□□ -1.09
TRAPPC9-204ENST00000518723 AGPAT2O15120 278 aa8.26□□□□□ -1.09
TRAPPC9-204ENST00000518723 PSCAO43653 123 aa8.26□□□□□ -1.09
TRAPPC9-204ENST00000518723 COX7A2P2O60397 106 aa8.26□□□□□ -1.09
TRAPPC9-204ENST00000518723 ZNF253O75346 499 aa8.26□□□□□ -1.09
TRAPPC9-204ENST00000518723 MPDU1O75352 247 aa8.26□□□□□ -1.09
TRAPPC9-204ENST00000518723 CCNKO75909 580 aa8.26□□□□□ -1.09
TRAPPC9-204ENST00000518723 FAUP35544 74 aaKnown RBP8.26□□□□□ -1.09
TRAPPC9-204ENST00000518723 CD300CQ08708 224 aa8.26□□□□□ -1.09
TRAPPC9-204ENST00000518723 BTN1A1Q13410 526 aa8.26□□□□□ -1.09
TRAPPC9-204ENST00000518723 PPP1R1AQ13522 171 aa8.26□□□□□ -1.09
TRAPPC9-204ENST00000518723 IQCF2Q8IXL9 164 aa8.26□□□□□ -1.09
TRAPPC9-204ENST00000518723 LINC00528Q8N1L1 170 aa8.26□□□□□ -1.09
TRAPPC9-204ENST00000518723 SMIM8Q96KF7 97 aa8.26□□□□□ -1.09
TRAPPC9-204ENST00000518723 LINC00477Q96M19 166 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms