RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 PEX7O00628 323 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 REG1AP05451 166 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 TRGC1P0CF51 173 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 GATA2P23769 480 aaPredicted RBP6.4□□□□□ -1.38
SFXN1-211ENST00000515736 CRYBB3P26998 211 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 MYCNOSP40205 109 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 DSCR9P59020 149 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 LMO4P61968 165 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 ZNF90Q03938 601 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 HES1Q14469 280 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 TMEM183BQ1AE95 376 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 TMEM183AQ8IXX5 376 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 GBGT1Q8N5D6 347 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 SGMS2Q8NHU3 365 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 FRZBQ92765 325 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 FMC1Q96HJ9 113 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 IGF2BP2-AS1Q96M15 143 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 KLF12Q9Y4X4 402 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 HILPDAQ9Y5L2 63 aa6.4□□□□□ -1.38
SFXN1-211ENST00000515736 FBN1P35555 2871 aaKnown RBP6.4□□□□□ -1.38
SFXN1-211ENST00000515736 PLXNB1O43157 2135 aa6.4□□□□□ -1.39
SFXN1-211ENST00000515736 IGLV11-55A0A075B6I3 123 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 IGHV4-30-2A0A087WSY4 118 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 SERTM2A0A1B0GWG4 89 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 K7EIM0 57 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 LY6HO94772 140 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 NBEAP1P0C6P0 100 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 RD3LP0DJH9 198 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 IGHV4-30-4P0DP06 118 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 HIST1H1EP10412 219 aaKnown RBP6.39□□□□□ -1.39
SFXN1-211ENST00000515736 GP9P14770 177 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 RAB9AP51151 201 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 NDUFA6P56556 154 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 ERVFC1-1P60608 527 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 PDE6HQ13956 83 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 LDLRAD2Q5SZI1 272 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 CLEC2AQ6UVW9 174 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 ZNF329Q86UD4 541 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 BPIFA4PQ86YQ2 179 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 OR1B1Q8NGR6 318 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 VN1R17PQ8TDU5 208 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 ATG101Q9BSB4 218 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 OTORQ9NRC9 128 aa6.39□□□□□ -1.39
SFXN1-211ENST00000515736 MRPL27Q9P0M9 148 aaKnown RBP6.39□□□□□ -1.39
SFXN1-211ENST00000515736 K7EN84 100 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 K7EQM0 130 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 FCN1O00602 326 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 PSG1P11464 419 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 ORM2P19652 201 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 UBE2G1P62253 170 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 KLRD1Q13241 179 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 FHL2Q14192 279 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 IBA57Q5T440 356 aaKnown RBP6.38□□□□□ -1.39
SFXN1-211ENST00000515736 LHFPL4Q7Z7J7 247 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 HIST3H2BBQ8N257 126 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 NECAP1Q8NC96 275 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 SHANK2-AS3Q9BTD1 123 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 GNB1LQ9BYB4 327 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 SLC25A39Q9BZJ4 359 aaPredicted RBP6.38□□□□□ -1.39
SFXN1-211ENST00000515736 BPESC1Q9GZL8 116 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 MRPL36Q9P0J6 103 aaKnown RBP6.38□□□□□ -1.39
SFXN1-211ENST00000515736 ZNF492Q9P255 531 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 EPDR1Q9UM22 224 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 TRAPPC1Q9Y5R8 145 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 SOX21Q9Y651 276 aaPredicted RBP6.38□□□□□ -1.39
SFXN1-211ENST00000515736 V9GYV3 84 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 VPS13CQ709C8 3753 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 DNHD1Q96M86 4753 aa6.38□□□□□ -1.39
SFXN1-211ENST00000515736 WI2-2373I1.2A0A1W2PRP0 233 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 SMIM27A0A1W2PRY6 76 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 FAM231BA6NCW3 169 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 H3BRN7 92 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 GNG7O60262 68 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 ZNF253O75346 499 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 IGKV1-17P01599 117 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 IGLV2-8P01709 118 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 SLC25A16P16260 332 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 IER3P46695 156 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 CRIP2P52943 208 aaPredicted RBP6.37□□□□□ -1.39
SFXN1-211ENST00000515736 KRTAP10-2P60368 255 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 CX3CL1P78423 397 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 PAX8Q06710 450 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 MORN5Q5VZ52 161 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 ATP5L2Q7Z4Y8 100 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 OR5T1Q8NG75 326 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 OR4F17Q8NGA8 305 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 C10orf105Q8TEF2 133 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 PACRGQ96M98 296 aaPredicted RBP6.37□□□□□ -1.39
SFXN1-211ENST00000515736 GPR82Q96P67 336 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 TBX15Q96SF7 602 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 C21orf62Q9NYP8 219 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 COX11Q9Y6N1 276 aa6.37□□□□□ -1.39
SFXN1-211ENST00000515736 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.36□□□□□ -1.392e-9■■■■■ 35.4
SFXN1-211ENST00000515736 TRAV5A0A0B4J249 113 aa6.36□□□□□ -1.39
SFXN1-211ENST00000515736 A0A1W2PRD5 423 aa6.36□□□□□ -1.39
SFXN1-211ENST00000515736 A0A1W2PRF3 423 aa6.36□□□□□ -1.39
SFXN1-211ENST00000515736 A0A1W2PRM7 423 aa6.36□□□□□ -1.39
SFXN1-211ENST00000515736 XKRY2A2RUG3 117 aa6.36□□□□□ -1.39
SFXN1-211ENST00000515736 NCBP2LA6PVI3 153 aaKnown RBP6.36□□□□□ -1.39
SFXN1-211ENST00000515736 M0QZK8 103 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms