RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	FHL2	Q14192	279 aa		6.97	□□□□□ -1.29
CLDND1-231	ENST00000515620	WFDC2	Q14508	124 aa		6.97	□□□□□ -1.29
CLDND1-231	ENST00000515620	LINC01620	Q4KN68	170 aa		6.97	□□□□□ -1.29
CLDND1-231	ENST00000515620	TEPP	Q6URK8	271 aa		6.97	□□□□□ -1.29
CLDND1-231	ENST00000515620	CYP2G1P	Q6ZSU1	146 aa		6.97	□□□□□ -1.29
CLDND1-231	ENST00000515620	ACOT7L	Q6ZUV0	252 aa		6.97	□□□□□ -1.29
CLDND1-231	ENST00000515620	TMEM229B	Q8NBD8	167 aa		6.97	□□□□□ -1.29
CLDND1-231	ENST00000515620	ZNF431	Q8TF32	576 aa	Predicted RBP	6.97	□□□□□ -1.29
CLDND1-231	ENST00000515620	PCNP	Q8WW12	178 aa	Known RBP	6.97	□□□□□ -1.29
CLDND1-231	ENST00000515620	VGLL1	Q99990	258 aa		6.97	□□□□□ -1.29
CLDND1-231	ENST00000515620	SLC50A1	Q9BRV3	221 aa		6.97	□□□□□ -1.29
CLDND1-231	ENST00000515620		A0A0B4J2A0	478 aa		6.96	□□□□□ -1.3
CLDND1-231	ENST00000515620	SMCO3	A2RU48	225 aa		6.96	□□□□□ -1.3
CLDND1-231	ENST00000515620		H3BTX0	84 aa		6.96	□□□□□ -1.3
CLDND1-231	ENST00000515620	MRPS12	O15235	138 aa	Known RBP	6.96	□□□□□ -1.3
CLDND1-231	ENST00000515620	RS1	O15537	224 aa		6.96	□□□□□ -1.3
CLDND1-231	ENST00000515620	GYPE	P15421	78 aa		6.96	□□□□□ -1.3
CLDND1-231	ENST00000515620	SURF2	Q15527	256 aa	Predicted RBP	6.96	□□□□□ -1.3
CLDND1-231	ENST00000515620	EIF4E3	Q8N5X7	224 aa	Known RBP	6.96	□□□□□ -1.3
CLDND1-231	ENST00000515620	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	6.96	□□□□□ -1.3
CLDND1-231	ENST00000515620	SHPK	Q9UHJ6	478 aa		6.96	□□□□□ -1.3
CLDND1-231	ENST00000515620	GPR132	Q9UNW8	380 aa		6.96	□□□□□ -1.3
CLDND1-231	ENST00000515620	KCNIP3	Q9Y2W7	256 aa		6.96	□□□□□ -1.3
CLDND1-231	ENST00000515620	FAT3	Q8TDW7	4589 aa		6.95	□□□□□ -1.3
CLDND1-231	ENST00000515620	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	6.95	□□□□□ -1.3
CLDND1-231	ENST00000515620	TRGV4	A0A0C4DH28	118 aa		6.95	□□□□□ -1.3
CLDND1-231	ENST00000515620	IGHV3-38	A0A0C4DH36	116 aa		6.95	□□□□□ -1.3
CLDND1-231	ENST00000515620	C7orf71	A4D174	169 aa		6.95	□□□□□ -1.3
CLDND1-231	ENST00000515620	LECT2	O14960	151 aa		6.95	□□□□□ -1.3
CLDND1-231	ENST00000515620	ANXA2R	Q3ZCQ2	193 aa		6.95	□□□□□ -1.3
CLDND1-231	ENST00000515620	ODF3	Q96PU9	254 aa		6.95	□□□□□ -1.3
CLDND1-231	ENST00000515620	MRPL32	Q9BYC8	188 aa	Known RBP	6.95	□□□□□ -1.3
CLDND1-231	ENST00000515620	IBA57-AS1	B1ANH7	110 aa		6.94	□□□□□ -1.3
CLDND1-231	ENST00000515620	DISC1	C4P0D8	188 aa		6.94	□□□□□ -1.3
CLDND1-231	ENST00000515620		H3BP45	60 aa		6.94	□□□□□ -1.3
CLDND1-231	ENST00000515620	SLC25A5	P05141	298 aa	Known RBP	6.94	□□□□□ -1.3
CLDND1-231	ENST00000515620	PLP1	P60201	277 aa		6.94	□□□□□ -1.3
CLDND1-231	ENST00000515620	RPP30	P78346	268 aa	Known RBP	6.94	□□□□□ -1.3
CLDND1-231	ENST00000515620	BTN1A1	Q13410	526 aa		6.94	□□□□□ -1.3
CLDND1-231	ENST00000515620	S100A7A	Q86SG5	101 aa		6.94	□□□□□ -1.3
CLDND1-231	ENST00000515620	CHAC1	Q9BUX1	264 aa		6.94	□□□□□ -1.3
CLDND1-231	ENST00000515620	ARL6	Q9H0F7	186 aa		6.94	□□□□□ -1.3
CLDND1-231	ENST00000515620	EXTL2	Q9UBQ6	330 aa		6.94	□□□□□ -1.3
CLDND1-231	ENST00000515620	WRB	O00258	174 aa		6.93	□□□□□ -1.3
CLDND1-231	ENST00000515620	PITX3	O75364	302 aa		6.93	□□□□□ -1.3
CLDND1-231	ENST00000515620	SFTA3	P0C7M3	94 aa		6.93	□□□□□ -1.3
CLDND1-231	ENST00000515620	CD300C	Q08708	224 aa		6.93	□□□□□ -1.3
CLDND1-231	ENST00000515620	LINC01556	Q5JQF7	62 aa		6.93	□□□□□ -1.3
CLDND1-231	ENST00000515620	SPANXN5	Q5MJ07	72 aa		6.93	□□□□□ -1.3
CLDND1-231	ENST00000515620	IBA57	Q5T440	356 aa	Known RBP	6.93	□□□□□ -1.3
CLDND1-231	ENST00000515620	PATE2	Q6UY27	113 aa		6.93	□□□□□ -1.3
CLDND1-231	ENST00000515620	CIRBP-AS1	Q8TBR5	109 aa		6.93	□□□□□ -1.3
CLDND1-231	ENST00000515620	CIB3	Q96Q77	187 aa	Predicted RBP	6.93	□□□□□ -1.3
CLDND1-231	ENST00000515620	TXNDC17	Q9BRA2	123 aa		6.93	□□□□□ -1.3
CLDND1-231	ENST00000515620	ARV1	Q9H2C2	271 aa		6.93	□□□□□ -1.3
CLDND1-231	ENST00000515620	TP53TG3	Q9ULZ0	132 aa		6.93	□□□□□ -1.3
CLDND1-231	ENST00000515620	PXMP4	Q9Y6I8	212 aa		6.93	□□□□□ -1.3
CLDND1-231	ENST00000515620	DNAH8	Q96JB1	4490 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	MED6	O75586	246 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	GHRH	P01286	108 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	IGLV2-8	P01709	118 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	ORM1	P02763	201 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	MT1HL1	P0DM35	61 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	RNASE4	P34096	147 aa	Known RBP	6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	ASIP	P42127	132 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	PPT1	P50897	306 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	HNRNPA3	P51991	378 aa	Known RBP	6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	SELENOT	P62341	195 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	SRPX	P78539	464 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	BPIFA4P	Q86YQ2	179 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	OR51S1	Q8NGJ8	323 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	BLNK	Q8WV28	456 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	YIPF6	Q96EC8	236 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	ZNF479	Q96JC4	524 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	DNAJC4	Q9NNZ3	241 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	RNF24	Q9Y225	148 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	RNF213	Q63HN8	5207 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	LRP2	P98164	4655 aa		6.92	□□□□□ -1.3
CLDND1-231	ENST00000515620	hCG_2014768	A0A024R1R8	64 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	LOC100131303	A0A0U1RQF7	123 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	KLLN	B2CW77	178 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620		C9JCJ5	164 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	RGS13	O14921	159 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	SYNGR2	O43760	224 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	MPDU1	O75352	247 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	CCNK	O75909	580 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	IGHV3-30	P01768	117 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	IGHV3-33	P01772	117 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	IGHV3-30-3	P0DP02	117 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	IGHV3-30-5	P0DP03	117 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	ANXA3	P12429	323 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	RPL37A	P61513	92 aa	Known RBP	6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	NCS1	P62166	190 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	ERCC8	Q13216	396 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	MZT2A	Q6P582	158 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	LINC00305	Q7Z4B0	112 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	PRRT1	Q99946	306 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	ARPC5L	Q9BPX5	153 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	SLC25A31	Q9H0C2	315 aa		6.91	□□□□□ -1.3
CLDND1-231	ENST00000515620	STRAP	Q9Y3F4	350 aa	Known RBP	6.91	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms