RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, human

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM3-222	ENST00000515609	CMC4	P56277	68 aa	Predicted RBP	7.23	□□□□□ -1.25
TPM3-222	ENST00000515609	RNF212	Q495C1	297 aa		7.23	□□□□□ -1.25
TPM3-222	ENST00000515609	TMEM78	Q5T7P6	136 aa		7.23	□□□□□ -1.25
TPM3-222	ENST00000515609	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		7.23	□□□□□ -1.25
TPM3-222	ENST00000515609	RBPMS2	Q6ZRY4	209 aa	Known RBP	7.23	□□□□□ -1.25
TPM3-222	ENST00000515609	FAM231D	Q6ZW35	169 aa		7.23	□□□□□ -1.25
TPM3-222	ENST00000515609	TMEM183A	Q8IXX5	376 aa		7.23	□□□□□ -1.25
TPM3-222	ENST00000515609	OR10J6P	Q8NGY7	276 aa		7.23	□□□□□ -1.25
TPM3-222	ENST00000515609	OCC1	Q8TAD7	63 aa		7.23	□□□□□ -1.25
TPM3-222	ENST00000515609	DYNLRB2	Q8TF09	96 aa		7.23	□□□□□ -1.25
TPM3-222	ENST00000515609	SIGLEC8	Q9NYZ4	499 aa		7.23	□□□□□ -1.25
TPM3-222	ENST00000515609	SMAD5-AS1	Q9Y6J3	95 aa		7.23	□□□□□ -1.25
TPM3-222	ENST00000515609	CSMD2	Q7Z408	3487 aa		7.23	□□□□□ -1.25
TPM3-222	ENST00000515609	IGHV3OR16-13	A0A075B7E8	117 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	IGHV3-49	A0A0A0MS15	119 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	IGHV3-74	A0A0B4J1X5	117 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	TRBV7-9	A0A0J9YWB2	115 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	XKRY2	A2RUG3	117 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609		H3BTX0	84 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	SLC17A3	O00476	420 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	APOH	P02749	345 aa	Predicted RBP	7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	FOLR2	P14207	255 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	GNG5	P63218	68 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	TCTEX1D4	Q5JR98	221 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	IBA57	Q5T440	356 aa	Known RBP	7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	ATRAID	Q6UW56	229 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	ZNF738	Q8NE65	137 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	OR4B1	Q8NGF8	309 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	IGF2BP2-AS1	Q96M15	143 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	LINC00477	Q96M19	166 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	C17orf77	Q96MU5	243 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	CITED2	Q99967	270 aa	Predicted RBP	7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	PPP1R14D	Q9NXH3	145 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	PSG8	Q9UQ74	426 aa		7.22	□□□□□ -1.25
TPM3-222	ENST00000515609	ACAN	P16112	2415 aa		7.21	□□□□□ -1.25
TPM3-222	ENST00000515609	TRBV20OR9-2	A0A075B6H5	130 aa		7.21	□□□□□ -1.26
TPM3-222	ENST00000515609	SNRPC	P09234	159 aa	Known RBP	7.21	□□□□□ -1.26
TPM3-222	ENST00000515609	CD28	P10747	220 aa		7.21	□□□□□ -1.26
TPM3-222	ENST00000515609	FHL3	Q13643	280 aa		7.21	□□□□□ -1.26
TPM3-222	ENST00000515609	COX19	Q49B96	90 aa		7.21	□□□□□ -1.26
TPM3-222	ENST00000515609	TMEM88	Q6PEY1	159 aa		7.21	□□□□□ -1.26
TPM3-222	ENST00000515609	PRNT	Q86SH4	94 aa		7.21	□□□□□ -1.26
TPM3-222	ENST00000515609		Q86TA4	180 aa		7.21	□□□□□ -1.26
TPM3-222	ENST00000515609	SAV1	Q9H4B6	383 aa	Predicted RBP	7.21	□□□□□ -1.26
TPM3-222	ENST00000515609	ZNF492	Q9P255	531 aa		7.21	□□□□□ -1.26
TPM3-222	ENST00000515609	SON	P18583	2426 aa	Known RBP	7.21	□□□□□ -1.26
TPM3-222	ENST00000515609	TRAV34	A0A0B4J273	112 aa		7.2	□□□□□ -1.26
TPM3-222	ENST00000515609	FAM231B	A6NCW3	169 aa		7.2	□□□□□ -1.26
TPM3-222	ENST00000515609	OR4C46	A6NHA9	309 aa		7.2	□□□□□ -1.26
TPM3-222	ENST00000515609		A8MWL6	223 aa		7.2	□□□□□ -1.26
TPM3-222	ENST00000515609		M0R3E3	92 aa		7.2	□□□□□ -1.26
TPM3-222	ENST00000515609	GATC	O43716	136 aa	Known RBP	7.2	□□□□□ -1.26
TPM3-222	ENST00000515609	SCO1	O75880	301 aa		7.2	□□□□□ -1.26
TPM3-222	ENST00000515609		P01737	135 aa		7.2	□□□□□ -1.26
TPM3-222	ENST00000515609	ZNF138	P52744	262 aa		7.2	□□□□□ -1.26
TPM3-222	ENST00000515609	SMUG1	Q53HV7	270 aa		7.2	□□□□□ -1.26
TPM3-222	ENST00000515609	CT83	Q5H943	113 aa		7.2	□□□□□ -1.26
TPM3-222	ENST00000515609	C9orf47	Q6ZRZ4	202 aa		7.2	□□□□□ -1.26
TPM3-222	ENST00000515609	COX8C	Q7Z4L0	72 aa		7.2	□□□□□ -1.26
TPM3-222	ENST00000515609	GBGT1	Q8N5D6	347 aa		7.2	□□□□□ -1.26
TPM3-222	ENST00000515609	OR2K2	Q8NGT1	345 aa		7.2	□□□□□ -1.26
TPM3-222	ENST00000515609	ASCL2	Q99929	193 aa		7.2	□□□□□ -1.26
TPM3-222	ENST00000515609	MLST8	Q9BVC4	326 aa		7.2	□□□□□ -1.26
TPM3-222	ENST00000515609	TRBV24-1	A0A075B6N3	115 aa		7.19	□□□□□ -1.26
TPM3-222	ENST00000515609		A0A1W2PRX2	142 aa		7.19	□□□□□ -1.26
TPM3-222	ENST00000515609	ZNF705G	A8MUZ8	300 aa	Predicted RBP	7.19	□□□□□ -1.26
TPM3-222	ENST00000515609	DUSP14	O95147	198 aa	Known RBP	7.19	□□□□□ -1.26
TPM3-222	ENST00000515609	PF4	P02776	101 aa		7.19	□□□□□ -1.26
TPM3-222	ENST00000515609	SLURP1	P55000	103 aa		7.19	□□□□□ -1.26
TPM3-222	ENST00000515609	RPS20	P60866	119 aa	Known RBP	7.19	□□□□□ -1.26
TPM3-222	ENST00000515609		Q6AWC8	147 aa		7.19	□□□□□ -1.26
TPM3-222	ENST00000515609	EBLN2	Q6P2I7	272 aa		7.19	□□□□□ -1.26
TPM3-222	ENST00000515609	CBLN2	Q8IUK8	224 aa		7.19	□□□□□ -1.26
TPM3-222	ENST00000515609	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	7.19	□□□□□ -1.26
TPM3-222	ENST00000515609	DLX4	Q92988	240 aa	Predicted RBP	7.19	□□□□□ -1.26
TPM3-222	ENST00000515609	RAX2	Q96IS3	184 aa		7.19	□□□□□ -1.26
TPM3-222	ENST00000515609	LINC00479	Q96M42	142 aa		7.19	□□□□□ -1.26
TPM3-222	ENST00000515609	SPAG8	Q99932	426 aa	Predicted RBP	7.19	□□□□□ -1.26
TPM3-222	ENST00000515609	GFRA4	Q9GZZ7	299 aa		7.19	□□□□□ -1.26
TPM3-222	ENST00000515609	MS4A6A	Q9H2W1	248 aa		7.19	□□□□□ -1.26
TPM3-222	ENST00000515609	IL36B	Q9NZH7	164 aa		7.19	□□□□□ -1.26
TPM3-222	ENST00000515609	MXRA5	Q9NR99	2828 aa		7.19	□□□□□ -1.26
TPM3-222	ENST00000515609	SOCS3	O14543	225 aa		7.18	□□□□□ -1.26
TPM3-222	ENST00000515609	IGLV2-11	P01706	119 aa		7.18	□□□□□ -1.26
TPM3-222	ENST00000515609	TSPO	P30536	169 aa		7.18	□□□□□ -1.26
TPM3-222	ENST00000515609	INSL3	P51460	131 aa		7.18	□□□□□ -1.26
TPM3-222	ENST00000515609	DEFB136	Q30KP8	78 aa		7.18	□□□□□ -1.26
TPM3-222	ENST00000515609	FAM162B	Q5T6X4	162 aa		7.18	□□□□□ -1.26
TPM3-222	ENST00000515609	PRR27	Q6MZM9	219 aa		7.18	□□□□□ -1.26
TPM3-222	ENST00000515609	FAM24B	Q8N5W8	94 aa		7.18	□□□□□ -1.26
TPM3-222	ENST00000515609	DCANP1	Q8TF63	244 aa		7.18	□□□□□ -1.26
TPM3-222	ENST00000515609	PRR25	Q96S07	402 aa		7.18	□□□□□ -1.26
TPM3-222	ENST00000515609	OTOG	Q6ZRI0	2925 aa		7.17	□□□□□ -1.26
TPM3-222	ENST00000515609	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	7.17	□□□□□ -1.26
TPM3-222	ENST00000515609	TRAV8-2	A0A0B4J237	113 aa		7.17	□□□□□ -1.26
TPM3-222	ENST00000515609	PGPEP1L	A6NFU8	196 aa		7.17	□□□□□ -1.26
TPM3-222	ENST00000515609	FABP5P3	A8MUU1	101 aa		7.17	□□□□□ -1.26
TPM3-222	ENST00000515609	NPIPB6	E9PJ23	425 aa		7.17	□□□□□ -1.26
TPM3-222	ENST00000515609		K7EN84	100 aa		7.17	□□□□□ -1.26
TPM3-222	ENST00000515609		K7EQG2	157 aa		7.17	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms