RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 MAP1LC3B2A6NCE7 125 aa11.12□□□□□ -0.63
PDCD6-211ENST00000515587 H3BMM0 161 aa11.12□□□□□ -0.63
PDCD6-211ENST00000515587 UBE2CO00762 179 aa11.12□□□□□ -0.63
PDCD6-211ENST00000515587 NDUFB4O95168 129 aa11.12□□□□□ -0.63
PDCD6-211ENST00000515587 NHLRC4P0CG21 123 aaPredicted RBP11.12□□□□□ -0.63
PDCD6-211ENST00000515587 GCHFRP30047 84 aa11.12□□□□□ -0.63
PDCD6-211ENST00000515587 RAB5CP51148 216 aa11.12□□□□□ -0.63
PDCD6-211ENST00000515587 NUTF2P61970 127 aaKnown RBP11.12□□□□□ -0.63
PDCD6-211ENST00000515587 HAGHQ16775 308 aa11.12□□□□□ -0.63
PDCD6-211ENST00000515587 FAM74A1Q5RGS3 127 aa11.12□□□□□ -0.63
PDCD6-211ENST00000515587 MORN3Q6PF18 240 aaPredicted RBP11.12□□□□□ -0.63
PDCD6-211ENST00000515587 TRPT1Q86TN4 253 aaKnown RBP11.12□□□□□ -0.63
PDCD6-211ENST00000515587 OR4B1Q8NGF8 309 aa11.12□□□□□ -0.63
PDCD6-211ENST00000515587 MRPL53Q96EL3 112 aaKnown RBP11.12□□□□□ -0.63
PDCD6-211ENST00000515587 PHYHIPLQ96FC7 376 aa11.12□□□□□ -0.63
PDCD6-211ENST00000515587 MAP1LC3BQ9GZQ8 125 aa11.12□□□□□ -0.63
PDCD6-211ENST00000515587 COL7A1Q02388 2944 aa11.11□□□□□ -0.63
PDCD6-211ENST00000515587 F6UB75 175 aa11.11□□□□□ -0.63
PDCD6-211ENST00000515587 RANP62826 216 aaKnown RBP11.11□□□□□ -0.63
PDCD6-211ENST00000515587 ICAM4Q14773 271 aa11.11□□□□□ -0.63
PDCD6-211ENST00000515587 ZNF726P1Q15940 193 aa11.11□□□□□ -0.63
PDCD6-211ENST00000515587 SSX7Q7RTT5 188 aa11.11□□□□□ -0.63
PDCD6-211ENST00000515587 SBSPONQ8IVN8 264 aa11.11□□□□□ -0.63
PDCD6-211ENST00000515587 EXOC3-AS1Q8N2X6 119 aa11.11□□□□□ -0.63
PDCD6-211ENST00000515587 OR10J6PQ8NGY7 276 aa11.11□□□□□ -0.63
PDCD6-211ENST00000515587 CSTL1Q9H114 145 aa11.11□□□□□ -0.63
PDCD6-211ENST00000515587 ZMAT4Q9H898 229 aa11.11□□□□□ -0.63
PDCD6-211ENST00000515587 ZNF705FA8MVS1 300 aaPredicted RBP11.1□□□□□ -0.63
PDCD6-211ENST00000515587 IGKV3-20P01619 116 aa11.1□□□□□ -0.63
PDCD6-211ENST00000515587 CSN1S1P47710 185 aa11.1□□□□□ -0.63
PDCD6-211ENST00000515587 FGF8P55075 233 aaPredicted RBP11.1□□□□□ -0.63
PDCD6-211ENST00000515587 DEFB1P60022 68 aa11.1□□□□□ -0.63
PDCD6-211ENST00000515587 HIST1H1AQ02539 215 aaPredicted RBP11.1□□□□□ -0.63
PDCD6-211ENST00000515587 GDF5OSQ5U4N7 250 aa11.1□□□□□ -0.63
PDCD6-211ENST00000515587 OR8A1Q8NGG7 326 aa11.1□□□□□ -0.63
PDCD6-211ENST00000515587 WWC2-AS2Q96NR7 200 aa11.1□□□□□ -0.63
PDCD6-211ENST00000515587 Q9H3A6 140 aa11.1□□□□□ -0.63
PDCD6-211ENST00000515587 PPP1R14DQ9NXH3 145 aa11.1□□□□□ -0.63
PDCD6-211ENST00000515587 CA1P00915 261 aaPredicted RBP11.09□□□□□ -0.63
PDCD6-211ENST00000515587 H2AFB1P0C5Y9 115 aa11.09□□□□□ -0.63
PDCD6-211ENST00000515587 FHITP49789 147 aa11.09□□□□□ -0.63
PDCD6-211ENST00000515587 SULT1A2P50226 295 aa11.09□□□□□ -0.63
PDCD6-211ENST00000515587 CMTM2Q8TAZ6 248 aa11.09□□□□□ -0.63
PDCD6-211ENST00000515587 SFT2D1Q8WV19 159 aa11.09□□□□□ -0.63
PDCD6-211ENST00000515587 CLUHP3Q96NS8 147 aa11.09□□□□□ -0.63
PDCD6-211ENST00000515587 SPATA25Q9BR10 227 aa11.09□□□□□ -0.63
PDCD6-211ENST00000515587 OTORQ9NRC9 128 aa11.09□□□□□ -0.63
PDCD6-211ENST00000515587 PLA2G2EQ9NZK7 142 aa11.09□□□□□ -0.63
PDCD6-211ENST00000515587 TEX46H3BTG2 121 aa11.08□□□□□ -0.64
PDCD6-211ENST00000515587 BOLA2-SMG1P6H3BVE0 249 aa11.08□□□□□ -0.64
PDCD6-211ENST00000515587 M0R3E3 92 aa11.08□□□□□ -0.64
PDCD6-211ENST00000515587 CNN1P51911 297 aaKnown RBP11.08□□□□□ -0.64
PDCD6-211ENST00000515587 SUN5Q8TC36 379 aa11.08□□□□□ -0.64
PDCD6-211ENST00000515587 RXFP4Q8TDU9 374 aa11.08□□□□□ -0.64
PDCD6-211ENST00000515587 MBD3L1Q8WWY6 194 aa11.08□□□□□ -0.64
PDCD6-211ENST00000515587 C1QTNF4Q9BXJ3 329 aa11.08□□□□□ -0.64
PDCD6-211ENST00000515587 BOLA1Q9Y3E2 137 aa11.08□□□□□ -0.64
PDCD6-211ENST00000515587 DYNC2H1Q8NCM8 4307 aaKnown RBP11.08□□□□□ -0.64
PDCD6-211ENST00000515587 SACSQ9NZJ4 4579 aa11.08□□□□□ -0.64
PDCD6-211ENST00000515587 PGPA6NDG6 321 aa11.07□□□□□ -0.64
PDCD6-211ENST00000515587 ZNF705DP0CH99 300 aaPredicted RBP11.07□□□□□ -0.64
PDCD6-211ENST00000515587 ZNF705BP0CI00 300 aaPredicted RBP11.07□□□□□ -0.64
PDCD6-211ENST00000515587 Q6ZWC4 215 aa11.07□□□□□ -0.64
PDCD6-211ENST00000515587 TM2D3Q9BRN9 247 aa11.07□□□□□ -0.64
PDCD6-211ENST00000515587 PRAC2D3DTV9 90 aa11.06□□□□□ -0.64
PDCD6-211ENST00000515587 HBE1P02100 147 aa11.06□□□□□ -0.64
PDCD6-211ENST00000515587 PPT1P50897 306 aa11.06□□□□□ -0.64
PDCD6-211ENST00000515587 ALKAL2Q6UX46 152 aa11.06□□□□□ -0.64
PDCD6-211ENST00000515587 RCHY1Q96PM5 261 aa11.06□□□□□ -0.64
PDCD6-211ENST00000515587 TMPRSS5Q9H3S3 457 aa11.06□□□□□ -0.64
PDCD6-211ENST00000515587 A0A1B0GV50 99 aa11.05□□□□□ -0.64
PDCD6-211ENST00000515587 A0A1W2PRE2 83 aa11.05□□□□□ -0.64
PDCD6-211ENST00000515587 A8MTW9 85 aa11.05□□□□□ -0.64
PDCD6-211ENST00000515587 ZNF705EA8MWA4 302 aaPredicted RBP11.05□□□□□ -0.64
PDCD6-211ENST00000515587 AMBPP02760 352 aa11.05□□□□□ -0.64
PDCD6-211ENST00000515587 SLC25A5P05141 298 aaKnown RBP11.05□□□□□ -0.64
PDCD6-211ENST00000515587 PRB4P10163 310 aaPredicted RBP11.05□□□□□ -0.64
PDCD6-211ENST00000515587 UBE2G2P60604 165 aa11.05□□□□□ -0.64
PDCD6-211ENST00000515587 DEFB135Q30KP9 77 aa11.05□□□□□ -0.64
PDCD6-211ENST00000515587 NKX6-2Q9C056 277 aaPredicted RBP11.05□□□□□ -0.64
PDCD6-211ENST00000515587 RPH3ALQ9UNE2 315 aa11.05□□□□□ -0.64
PDCD6-211ENST00000515587 TENM2Q9NT68 2774 aa11.05□□□□□ -0.64
PDCD6-211ENST00000515587 NPIPB6E9PJ23 425 aa11.04□□□□□ -0.64
PDCD6-211ENST00000515587 SPRY2O43597 315 aa11.04□□□□□ -0.64
PDCD6-211ENST00000515587 TSPOP30536 169 aa11.04□□□□□ -0.64
PDCD6-211ENST00000515587 TMEM78Q5T7P6 136 aa11.04□□□□□ -0.64
PDCD6-211ENST00000515587 ARL6IP6Q8N6S5 226 aa11.04□□□□□ -0.64
PDCD6-211ENST00000515587 LINC00477Q96M19 166 aa11.04□□□□□ -0.64
PDCD6-211ENST00000515587 SLC35B3Q9H1N7 401 aa11.04□□□□□ -0.64
PDCD6-211ENST00000515587 XCL2Q9UBD3 114 aa11.04□□□□□ -0.64
PDCD6-211ENST00000515587 TP53TG1Q9Y2A0 90 aa11.04□□□□□ -0.64
PDCD6-211ENST00000515587 IGKV2-40A0A087WW87 121 aaPredicted RBP11.03□□□□□ -0.64
PDCD6-211ENST00000515587 TRAV1-1A0A0B4J248 108 aa11.03□□□□□ -0.64
PDCD6-211ENST00000515587 RBAKDNA6NC62 111 aa11.03□□□□□ -0.64
PDCD6-211ENST00000515587 DIRC3C9JPN6 131 aa11.03□□□□□ -0.64
PDCD6-211ENST00000515587 K7EQM0 130 aa11.03□□□□□ -0.64
PDCD6-211ENST00000515587 IGKV2D-40P01614 121 aaPredicted RBP11.03□□□□□ -0.64
PDCD6-211ENST00000515587 FXYD7P58549 80 aa11.03□□□□□ -0.64
PDCD6-211ENST00000515587 SUMO1P63165 101 aaKnown RBP11.03□□□□□ -0.64
PDCD6-211ENST00000515587 BLOC1S1P78537 153 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms