RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 C8orf49Q96NF6 230 aa7.31□□□□□ -1.24
DDX41-216ENST00000513562 CIB3Q96Q77 187 aaPredicted RBP7.31□□□□□ -1.24
DDX41-216ENST00000513562 PRRT1Q99946 306 aa7.31□□□□□ -1.24
DDX41-216ENST00000513562 VGLL1Q99990 258 aa7.31□□□□□ -1.24
DDX41-216ENST00000513562 HHLA3Q9XRX5 114 aa7.31□□□□□ -1.24
DDX41-216ENST00000513562 KLF12Q9Y4X4 402 aa7.31□□□□□ -1.24
DDX41-216ENST00000513562 A0A087WXM4 84 aa7.3□□□□□ -1.24
DDX41-216ENST00000513562 K7EQD1 137 aa7.3□□□□□ -1.24
DDX41-216ENST00000513562 SLC17A3O00476 420 aa7.3□□□□□ -1.24
DDX41-216ENST00000513562 PRAF2O60831 178 aa7.3□□□□□ -1.24
DDX41-216ENST00000513562 MED6O75586 246 aa7.3□□□□□ -1.24
DDX41-216ENST00000513562 ANXA7P20073 488 aaKnown RBP7.3□□□□□ -1.24
DDX41-216ENST00000513562 FHL2Q14192 279 aa7.3□□□□□ -1.24
DDX41-216ENST00000513562 MZT2AQ6P582 158 aa7.3□□□□□ -1.24
DDX41-216ENST00000513562 PATE2Q6UY27 113 aa7.3□□□□□ -1.24
DDX41-216ENST00000513562 LRTM2Q8N967 370 aa7.3□□□□□ -1.24
DDX41-216ENST00000513562 OR51S1Q8NGJ8 323 aa7.3□□□□□ -1.24
DDX41-216ENST00000513562 RNF24Q9Y225 148 aa7.3□□□□□ -1.24
DDX41-216ENST00000513562 PIGBOS1A0A0B4J2F0 54 aa7.29□□□□□ -1.24
DDX41-216ENST00000513562 DUXBA0A1W2PPF3 345 aa7.29□□□□□ -1.24
DDX41-216ENST00000513562 SYNGR2O43760 224 aa7.29□□□□□ -1.24
DDX41-216ENST00000513562 SLC25A5P05141 298 aaKnown RBP7.29□□□□□ -1.24
DDX41-216ENST00000513562 SNRPCP09234 159 aaKnown RBP7.29□□□□□ -1.24
DDX41-216ENST00000513562 AKAIN1P0CW23 69 aa7.29□□□□□ -1.24
DDX41-216ENST00000513562 SLC25A6P12236 298 aa7.29□□□□□ -1.24
DDX41-216ENST00000513562 ANXA3P12429 323 aa7.29□□□□□ -1.24
DDX41-216ENST00000513562 SRIP30626 198 aa7.29□□□□□ -1.24
DDX41-216ENST00000513562 VBP1P61758 197 aa7.29□□□□□ -1.24
DDX41-216ENST00000513562 SELENOTP62341 195 aa7.29□□□□□ -1.24
DDX41-216ENST00000513562 MRPS10P82664 201 aaKnown RBP7.29□□□□□ -1.24
DDX41-216ENST00000513562 C4orf46Q504U0 113 aa7.29□□□□□ -1.24
DDX41-216ENST00000513562 SPANXN5Q5MJ07 72 aa7.29□□□□□ -1.24
DDX41-216ENST00000513562 EIF4E3Q8N5X7 224 aaKnown RBP7.29□□□□□ -1.24
DDX41-216ENST00000513562 ARV1Q9H2C2 271 aa7.29□□□□□ -1.24
DDX41-216ENST00000513562 TRAV5A0A0B4J249 113 aa7.28□□□□□ -1.24
DDX41-216ENST00000513562 SMCO3A2RU48 225 aa7.28□□□□□ -1.24
DDX41-216ENST00000513562 C7orf71A4D174 169 aa7.28□□□□□ -1.24
DDX41-216ENST00000513562 H3BP45 60 aa7.28□□□□□ -1.24
DDX41-216ENST00000513562 K7EPK0 472 aa7.28□□□□□ -1.24
DDX41-216ENST00000513562 WRBO00258 174 aa7.28□□□□□ -1.24
DDX41-216ENST00000513562 IBA57Q5T440 356 aaKnown RBP7.28□□□□□ -1.24
DDX41-216ENST00000513562 SMIM4Q8WVI0 70 aa7.28□□□□□ -1.24
DDX41-216ENST00000513562 AP3S1Q92572 193 aa7.28□□□□□ -1.24
DDX41-216ENST00000513562 SCGB3A2Q96PL1 93 aa7.28□□□□□ -1.24
DDX41-216ENST00000513562 MRPL32Q9BYC8 188 aaKnown RBP7.28□□□□□ -1.24
DDX41-216ENST00000513562 MRPS26Q9BYN8 205 aaKnown RBP7.28□□□□□ -1.24
DDX41-216ENST00000513562 ARL6Q9H0F7 186 aa7.28□□□□□ -1.24
DDX41-216ENST00000513562 MRPL16Q9NX20 251 aaKnown RBP7.28□□□□□ -1.24
DDX41-216ENST00000513562 RCL1Q9Y2P8 373 aaKnown RBP7.28□□□□□ -1.24
DDX41-216ENST00000513562 PXMP4Q9Y6I8 212 aa7.28□□□□□ -1.24
DDX41-216ENST00000513562 LRP2P98164 4655 aa7.27□□□□□ -1.25
DDX41-216ENST00000513562 IBA57-AS1B1ANH7 110 aa7.27□□□□□ -1.25
DDX41-216ENST00000513562 KLLNB2CW77 178 aa7.27□□□□□ -1.25
DDX41-216ENST00000513562 E5RGE8 158 aa7.27□□□□□ -1.25
DDX41-216ENST00000513562 H3BTX0 84 aa7.27□□□□□ -1.25
DDX41-216ENST00000513562 IGLC2P0DOY2 106 aa7.27□□□□□ -1.25
DDX41-216ENST00000513562 ZNF415Q09FC8 603 aa7.27□□□□□ -1.25
DDX41-216ENST00000513562 SCXQ7RTU7 201 aa7.27□□□□□ -1.25
DDX41-216ENST00000513562 BPIFA4PQ86YQ2 179 aa7.27□□□□□ -1.25
DDX41-216ENST00000513562 CLVS1Q8IUQ0 354 aaPredicted RBP7.27□□□□□ -1.25
DDX41-216ENST00000513562 SAT2Q96F10 170 aaPredicted RBP7.27□□□□□ -1.25
DDX41-216ENST00000513562 STRAPQ9Y3F4 350 aaKnown RBP7.27□□□□□ -1.25
DDX41-216ENST00000513562 IGHV3-38A0A0C4DH36 116 aa7.26□□□□□ -1.25
DDX41-216ENST00000513562 ORM1P02763 201 aa7.26□□□□□ -1.25
DDX41-216ENST00000513562 CD300CQ08708 224 aa7.26□□□□□ -1.25
DDX41-216ENST00000513562 BTN1A1Q13410 526 aa7.26□□□□□ -1.25
DDX41-216ENST00000513562 LINC01556Q5JQF7 62 aa7.26□□□□□ -1.25
DDX41-216ENST00000513562 PXDC1Q5TGL8 231 aa7.26□□□□□ -1.25
DDX41-216ENST00000513562 LINC00305Q7Z4B0 112 aa7.26□□□□□ -1.25
DDX41-216ENST00000513562 IQCF2Q8IXL9 164 aa7.26□□□□□ -1.25
DDX41-216ENST00000513562 PCNPQ8WW12 178 aaKnown RBP7.26□□□□□ -1.25
DDX41-216ENST00000513562 FAM19A4Q96LR4 140 aa7.26□□□□□ -1.25
DDX41-216ENST00000513562 FUNDC2Q9BWH2 189 aa7.26□□□□□ -1.25
DDX41-216ENST00000513562 SCP2D1Q9UJQ7 156 aa7.26□□□□□ -1.25
DDX41-216ENST00000513562 TRGV4A0A0C4DH28 118 aa7.25□□□□□ -1.25
DDX41-216ENST00000513562 H3BQ15 152 aa7.25□□□□□ -1.25
DDX41-216ENST00000513562 MPDU1O75352 247 aa7.25□□□□□ -1.25
DDX41-216ENST00000513562 SMIM18P0DKX4 95 aa7.25□□□□□ -1.25
DDX41-216ENST00000513562 GYPEP15421 78 aa7.25□□□□□ -1.25
DDX41-216ENST00000513562 SLC38A11Q08AI6 406 aa7.25□□□□□ -1.25
DDX41-216ENST00000513562 WFDC2Q14508 124 aa7.25□□□□□ -1.25
DDX41-216ENST00000513562 MORN5Q5VZ52 161 aa7.25□□□□□ -1.25
DDX41-216ENST00000513562 TXNDC17Q9BRA2 123 aa7.25□□□□□ -1.25
DDX41-216ENST00000513562 MIXL1Q9H2W2 232 aa7.25□□□□□ -1.25
DDX41-216ENST00000513562 Q9HAA7 133 aa7.25□□□□□ -1.25
DDX41-216ENST00000513562 TP53TG3Q9ULZ0 132 aa7.25□□□□□ -1.25
DDX41-216ENST00000513562 ANKRD20A5PA0PJZ0 165 aa7.24□□□□□ -1.25
DDX41-216ENST00000513562 FNDC10F2Z333 226 aa7.24□□□□□ -1.25
DDX41-216ENST00000513562 TIRAPP58753 221 aa7.24□□□□□ -1.25
DDX41-216ENST00000513562 OPCMLQ14982 345 aa7.24□□□□□ -1.25
DDX41-216ENST00000513562 ZNF546Q86UE3 836 aa7.24□□□□□ -1.25
DDX41-216ENST00000513562 MRPL53Q96EL3 112 aaKnown RBP7.24□□□□□ -1.25
DDX41-216ENST00000513562 RABL2BQ9UNT1 228 aa7.24□□□□□ -1.25
DDX41-216ENST00000513562 PKHD1L1Q86WI1 4243 aa7.24□□□□□ -1.25
DDX41-216ENST00000513562 C9JCJ5 164 aa7.23□□□□□ -1.25
DDX41-216ENST00000513562 CTDSPLO15194 276 aa7.23□□□□□ -1.25
DDX41-216ENST00000513562 OR4E1P0C645 316 aa7.23□□□□□ -1.25
DDX41-216ENST00000513562 SFTA3P0C7M3 94 aa7.23□□□□□ -1.25
DDX41-216ENST00000513562 CRISP2P16562 243 aa7.23□□□□□ -1.25
DDX41-216ENST00000513562 RNASE4P34096 147 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms