RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 Q8N1Y9 231 aa5.8□□□□□ -1.48
CPNE4-208ENST00000511604 IFI27L2Q9H2X8 130 aa5.8□□□□□ -1.48
CPNE4-208ENST00000511604 CHCHD2Q9Y6H1 151 aaPredicted RBP5.8□□□□□ -1.48
CPNE4-208ENST00000511604 U3KQK5 164 aa5.8□□□□□ -1.48
CPNE4-208ENST00000511604 LRP4O75096 1905 aa5.8□□□□□ -1.48
CPNE4-208ENST00000511604 CACNA1AO00555 2505 aa5.8□□□□□ -1.48
CPNE4-208ENST00000511604 DOCK7Q96N67 2140 aa5.79□□□□□ -1.48
CPNE4-208ENST00000511604 TRAV40A0A0B4J280 105 aa5.79□□□□□ -1.48
CPNE4-208ENST00000511604 NCBP2LA6PVI3 153 aaKnown RBP5.79□□□□□ -1.48
CPNE4-208ENST00000511604 TM4SF5O14894 197 aa5.79□□□□□ -1.48
CPNE4-208ENST00000511604 FOXF2Q12947 444 aa5.79□□□□□ -1.48
CPNE4-208ENST00000511604 OR4C13Q8NGP0 309 aa5.79□□□□□ -1.48
CPNE4-208ENST00000511604 AAMDCQ9H7C9 122 aa5.79□□□□□ -1.48
CPNE4-208ENST00000511604 TMEM160Q9NX00 188 aa5.79□□□□□ -1.48
CPNE4-208ENST00000511604 WNT9BO14905 357 aa5.79□□□□□ -1.48
CPNE4-208ENST00000511604 UQCRQO14949 82 aa5.79□□□□□ -1.48
CPNE4-208ENST00000511604 FCGR3BO75015 233 aa5.79□□□□□ -1.48
CPNE4-208ENST00000511604 CCL3P10147 92 aa5.79□□□□□ -1.48
CPNE4-208ENST00000511604 TRPT1Q86TN4 253 aaKnown RBP5.79□□□□□ -1.48
CPNE4-208ENST00000511604 FXYD5Q96DB9 178 aa5.79□□□□□ -1.48
CPNE4-208ENST00000511604 FMC1Q96HJ9 113 aa5.79□□□□□ -1.48
CPNE4-208ENST00000511604 FOXC2Q99958 501 aa5.79□□□□□ -1.48
CPNE4-208ENST00000511604 METRNQ9UJH8 293 aa5.79□□□□□ -1.48
CPNE4-208ENST00000511604 IGLV3-32A0A0A0MS00 114 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 TRBV7-7A0A0K0K1E9 115 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 RBAKDNA6NC62 111 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 H3BTX0 84 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 PLAUP00749 431 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 IGHV3-48P01763 117 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 TMEM155Q4W5P6 130 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 CXorf67Q86X51 503 aaPredicted RBP5.78□□□□□ -1.48
CPNE4-208ENST00000511604 C11orf53Q8IXP5 236 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 NTN5Q8WTR8 489 aaPredicted RBP5.78□□□□□ -1.48
CPNE4-208ENST00000511604 LINC00526Q96FQ7 95 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 DUX3Q96PT4 197 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 FAM236AA0A1B0GUQ0 79 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 FAM236BA0A1B0GV22 79 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 PGPA6NDG6 321 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 MBD3L4A6NDZ8 208 aaPredicted RBP5.78□□□□□ -1.48
CPNE4-208ENST00000511604 MBD3L3A6NE82 208 aaPredicted RBP5.78□□□□□ -1.48
CPNE4-208ENST00000511604 MBD3L5A6NJ08 208 aaPredicted RBP5.78□□□□□ -1.48
CPNE4-208ENST00000511604 TIMM23O14925 209 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 CXCL13O43927 109 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 ATP5LO75964 103 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 DKK1O94907 266 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 ERVK-16P61578 105 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 SRSF9Q13242 221 aaKnown RBP eCLIP5.78□□□□□ -1.48
CPNE4-208ENST00000511604 RPL39P5Q59GN2 51 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 AAED1Q7RTV5 226 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 AMN1Q8IY45 258 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 SPANXCQ9NY87 97 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 PRNDQ9UKY0 176 aa5.78□□□□□ -1.48
CPNE4-208ENST00000511604 SVILO95425 2214 aa5.77□□□□□ -1.49
CPNE4-208ENST00000511604 IGHV3OR15-7A0A075B7D8 119 aa5.77□□□□□ -1.49
CPNE4-208ENST00000511604 C4orf26Q17RF5 130 aa5.77□□□□□ -1.49
CPNE4-208ENST00000511604 ZNF672Q499Z4 452 aaPredicted RBP5.77□□□□□ -1.49
CPNE4-208ENST00000511604 FAM104BQ5XKR9 115 aa5.77□□□□□ -1.49
CPNE4-208ENST00000511604 SRSF12Q8WXF0 261 aaKnown RBP5.77□□□□□ -1.49
CPNE4-208ENST00000511604 CFHR4Q92496 578 aa5.77□□□□□ -1.49
CPNE4-208ENST00000511604 TIMD4Q96H15 378 aa5.77□□□□□ -1.49
CPNE4-208ENST00000511604 MRPL35Q9NZE8 188 aaKnown RBP5.77□□□□□ -1.49
CPNE4-208ENST00000511604 CEP192Q8TEP8 1941 aa5.77□□□□□ -1.49
CPNE4-208ENST00000511604 LEPP41159 167 aa5.77□□□□□ -1.49
CPNE4-208ENST00000511604 TEX36Q5VZQ5 186 aa5.77□□□□□ -1.49
CPNE4-208ENST00000511604 HRCT1Q6UXD1 115 aa5.77□□□□□ -1.49
CPNE4-208ENST00000511604 ZNF826PQ6ZT77 177 aa5.77□□□□□ -1.49
CPNE4-208ENST00000511604 PRDM14Q9GZV8 571 aa5.77□□□□□ -1.49
CPNE4-208ENST00000511604 ARFGEF3Q5TH69 2177 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 DOCK10Q96BY6 2186 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 TRGV11A0A075B6L2 103 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 TEX49A0A1B0GTD5 131 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 C15orf61A6NNL5 157 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 COX7A2P2O60397 106 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 ORM1P02763 201 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 CRYGBP07316 175 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 RPL13AP40429 203 aaKnown RBP5.76□□□□□ -1.49
CPNE4-208ENST00000511604 EFNA4P52798 201 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 CRIP2P52943 208 aaPredicted RBP5.76□□□□□ -1.49
CPNE4-208ENST00000511604 MZT1Q08AG7 82 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 LINC01559Q495D7 138 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 MRPL51Q4U2R6 128 aaKnown RBP5.76□□□□□ -1.49
CPNE4-208ENST00000511604 DUX4L9Q6RFH8 374 aaPredicted RBP5.76□□□□□ -1.49
CPNE4-208ENST00000511604 NDUFA11Q86Y39 141 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 POM121L12Q8N7R1 296 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 IGFBPL1Q8WX77 278 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 INTS1Q8N201 2190 aaKnown RBP5.76□□□□□ -1.49
CPNE4-208ENST00000511604 J3QLI3 93 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 K7EM74 188 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 K7ESF4 209 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 TCRAP04437 139 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 LGALS1P09382 135 aaKnown RBP5.76□□□□□ -1.49
CPNE4-208ENST00000511604 RFPL3SP0C7P2 107 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 IGFBP4P22692 258 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 SRSF2Q01130 221 aaKnown RBP5.76□□□□□ -1.49
CPNE4-208ENST00000511604 ZNF56Q15929 161 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 C10orf113Q5VZT2 155 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 LEAP2Q969E1 77 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 ZNF714Q96N38 554 aa5.76□□□□□ -1.49
CPNE4-208ENST00000511604 MRPL20Q9BYC9 149 aaKnown RBP5.76□□□□□ -1.49
CPNE4-208ENST00000511604 LGALS9O00182 355 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms