RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 HMGB3O15347 200 aaKnown RBP6.3□□□□□ -1.4
SNCA-211ENST00000508895 PFDN1O60925 122 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 ZNF253O75346 499 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 STAG3L2P0CL84 134 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 STAG3L3P0CL85 134 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 ARL14EPLP0DKL9 152 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 HIST1H1EP10412 219 aaKnown RBP6.3□□□□□ -1.4
SNCA-211ENST00000508895 PDE6HQ13956 83 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 ZNF726P1Q15940 193 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 GUK1Q16774 197 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 ZFP69Q49AA0 526 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 FOXI2Q6ZQN5 318 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 Q6ZWC4 215 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 STHQ8IWL8 128 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 KIR2DL5AQ8N109 375 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 KIR2DL5BQ8NHK3 375 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 IL17DQ8TAD2 202 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 PAXXQ9BUH6 204 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 CSTL1Q9H114 145 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 OR51M1Q9H341 326 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 PLA2G2EQ9NZK7 142 aa6.3□□□□□ -1.4
SNCA-211ENST00000508895 HERC2O95714 4834 aa6.29□□□□□ -1.4
SNCA-211ENST00000508895 PRAC2D3DTV9 90 aa6.29□□□□□ -1.4
SNCA-211ENST00000508895 MBP02144 154 aa6.29□□□□□ -1.4
SNCA-211ENST00000508895 NKX2-5P52952 324 aaPredicted RBP6.29□□□□□ -1.4
SNCA-211ENST00000508895 APOC4P55056 127 aa6.29□□□□□ -1.4
SNCA-211ENST00000508895 TAS2R45P59539 299 aa6.29□□□□□ -1.4
SNCA-211ENST00000508895 PMS2P11Q13670 270 aa6.29□□□□□ -1.4
SNCA-211ENST00000508895 PSG3Q16557 428 aa6.29□□□□□ -1.4
SNCA-211ENST00000508895 ZNF738Q8NE65 137 aa6.29□□□□□ -1.4
SNCA-211ENST00000508895 BLNKQ8WV28 456 aa6.29□□□□□ -1.4
SNCA-211ENST00000508895 RNF141Q8WVD5 230 aa6.29□□□□□ -1.4
SNCA-211ENST00000508895 RAB24Q969Q5 203 aa6.29□□□□□ -1.4
SNCA-211ENST00000508895 CLEC5AQ9NY25 188 aa6.29□□□□□ -1.4
SNCA-211ENST00000508895 CTXND1A0A1B0GTU2 59 aa6.28□□□□□ -1.4
SNCA-211ENST00000508895 A0A1W2PPV4 95 aa6.28□□□□□ -1.4
SNCA-211ENST00000508895 ZNF705FA8MVS1 300 aaPredicted RBP6.28□□□□□ -1.4
SNCA-211ENST00000508895 M0R3E3 92 aa6.28□□□□□ -1.4
SNCA-211ENST00000508895 CA1P00915 261 aaPredicted RBP6.28□□□□□ -1.4
SNCA-211ENST00000508895 NBEAP1P0C6P0 100 aa6.28□□□□□ -1.4
SNCA-211ENST00000508895 SEC11BP0C7V7 166 aa6.28□□□□□ -1.4
SNCA-211ENST00000508895 ZNF705DP0CH99 300 aaPredicted RBP6.28□□□□□ -1.4
SNCA-211ENST00000508895 ZNF705BP0CI00 300 aaPredicted RBP6.28□□□□□ -1.4
SNCA-211ENST00000508895 RBMY1A1P0DJD3 496 aaKnown RBP6.28□□□□□ -1.4
SNCA-211ENST00000508895 RBMY1CP0DJD4 496 aa6.28□□□□□ -1.4
SNCA-211ENST00000508895 TPT1P13693 172 aaKnown RBP6.28□□□□□ -1.4
SNCA-211ENST00000508895 FHITP49789 147 aa6.28□□□□□ -1.4
SNCA-211ENST00000508895 RBMY1FQ15415 496 aaKnown RBP6.28□□□□□ -1.4
SNCA-211ENST00000508895 AKR1C8PQ5T2L2 129 aa6.28□□□□□ -1.4
SNCA-211ENST00000508895 AMTNQ6UX39 209 aa6.28□□□□□ -1.4
SNCA-211ENST00000508895 PQLC2Q6ZP29 291 aa6.28□□□□□ -1.4
SNCA-211ENST00000508895 BAP18Q8IXM2 172 aa6.28□□□□□ -1.4
SNCA-211ENST00000508895 EXOC3-AS1Q8N2X6 119 aa6.28□□□□□ -1.4
SNCA-211ENST00000508895 CSNK1G2-AS1Q8NCQ2 148 aa6.28□□□□□ -1.4
SNCA-211ENST00000508895 LRRC20Q8TCA0 184 aa6.28□□□□□ -1.4
SNCA-211ENST00000508895 TMED6Q8WW62 240 aa6.28□□□□□ -1.4
SNCA-211ENST00000508895 RPUSD4Q96CM3 377 aaKnown RBP6.28□□□□□ -1.4
SNCA-211ENST00000508895 MRPL53Q96EL3 112 aaKnown RBP6.28□□□□□ -1.4
SNCA-211ENST00000508895 TP53TG1Q9Y2A0 90 aa6.28□□□□□ -1.4
SNCA-211ENST00000508895 UBE2CO00762 179 aa6.27□□□□□ -1.41
SNCA-211ENST00000508895 IGKV3-20P01619 116 aa6.27□□□□□ -1.41
SNCA-211ENST00000508895 GCHFRP30047 84 aa6.27□□□□□ -1.41
SNCA-211ENST00000508895 CNN1P51911 297 aaKnown RBP6.27□□□□□ -1.41
SNCA-211ENST00000508895 FXYD7P58549 80 aa6.27□□□□□ -1.41
SNCA-211ENST00000508895 NANOS2P60321 138 aaKnown RBP6.27□□□□□ -1.41
SNCA-211ENST00000508895 PSG9Q00887 426 aa6.27□□□□□ -1.41
SNCA-211ENST00000508895 EBLN2Q6P2I7 272 aa6.27□□□□□ -1.41
SNCA-211ENST00000508895 Q8NAQ8 132 aa6.27□□□□□ -1.41
SNCA-211ENST00000508895 OR8A1Q8NGG7 326 aa6.27□□□□□ -1.41
SNCA-211ENST00000508895 OR11H2Q8NH07 326 aa6.27□□□□□ -1.41
SNCA-211ENST00000508895 SUN5Q8TC36 379 aa6.27□□□□□ -1.41
SNCA-211ENST00000508895 CLUHP3Q96NS8 147 aa6.27□□□□□ -1.41
SNCA-211ENST00000508895 ACTR3CQ9C0K3 210 aaPredicted RBP6.27□□□□□ -1.41
SNCA-211ENST00000508895 SLC35B3Q9H1N7 401 aa6.27□□□□□ -1.41
SNCA-211ENST00000508895 Q9H3A6 140 aa6.27□□□□□ -1.41
SNCA-211ENST00000508895 X6R8D5 127 aa6.27□□□□□ -1.41
SNCA-211ENST00000508895 NACAE9PAV3 2078 aa6.27□□□□□ -1.41
SNCA-211ENST00000508895 IGKV2-40A0A087WW87 121 aaPredicted RBP6.26□□□□□ -1.41
SNCA-211ENST00000508895 MAP1LC3B2A6NCE7 125 aa6.26□□□□□ -1.41
SNCA-211ENST00000508895 IGKV2D-40P01614 121 aaPredicted RBP6.26□□□□□ -1.41
SNCA-211ENST00000508895 FGF8P55075 233 aaPredicted RBP6.26□□□□□ -1.41
SNCA-211ENST00000508895 EIF5AP63241 154 aaKnown RBP6.26□□□□□ -1.41
SNCA-211ENST00000508895 HIST1H1AQ02539 215 aaPredicted RBP6.26□□□□□ -1.41
SNCA-211ENST00000508895 ICAM4Q14773 271 aa6.26□□□□□ -1.41
SNCA-211ENST00000508895 MORN3Q6PF18 240 aaPredicted RBP6.26□□□□□ -1.41
SNCA-211ENST00000508895 SLC51BQ86UW2 128 aa6.26□□□□□ -1.41
SNCA-211ENST00000508895 OR4B1Q8NGF8 309 aa6.26□□□□□ -1.41
SNCA-211ENST00000508895 RARRES2Q99969 163 aa6.26□□□□□ -1.41
SNCA-211ENST00000508895 MAP1LC3BQ9GZQ8 125 aa6.26□□□□□ -1.41
SNCA-211ENST00000508895 AAMDCQ9H7C9 122 aa6.26□□□□□ -1.41
SNCA-211ENST00000508895 DNAH10Q8IVF4 4471 aa6.26□□□□□ -1.41
SNCA-211ENST00000508895 FRAS1Q86XX4 4008 aa6.25□□□□□ -1.41
SNCA-211ENST00000508895 GGTLC3B5MD39 225 aa6.25□□□□□ -1.41
SNCA-211ENST00000508895 UMAD1C9J7I0 102 aa6.25□□□□□ -1.41
SNCA-211ENST00000508895 NPIPB6E9PJ23 425 aa6.25□□□□□ -1.41
SNCA-211ENST00000508895 BOLA2-SMG1P6H3BVE0 249 aa6.25□□□□□ -1.41
SNCA-211ENST00000508895 M0R2Z0 102 aa6.25□□□□□ -1.41
SNCA-211ENST00000508895 CXorf1O96002 111 aa6.25□□□□□ -1.41
SNCA-211ENST00000508895 RANP62826 216 aaKnown RBP6.25□□□□□ -1.41
SNCA-211ENST00000508895 SPINK13Q1W4C9 94 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms