RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 PSG9Q00887 426 aa1.71□□□□□ -2.14
TRAPPC13-209ENST00000508304 ARPINQ7Z6K5 226 aa1.71□□□□□ -2.14
TRAPPC13-209ENST00000508304 CBLN4Q9NTU7 201 aa1.71□□□□□ -2.14
TRAPPC13-209ENST00000508304 TAS2R7Q9NYW3 318 aa1.71□□□□□ -2.14
TRAPPC13-209ENST00000508304 STRCQ7RTU9 1775 aa1.7□□□□□ -2.14
TRAPPC13-209ENST00000508304 LOC107986453A0A1B0GWG9 222 aa1.7□□□□□ -2.14
TRAPPC13-209ENST00000508304 ZNF736B4DX44 427 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-209ENST00000508304 C9JAW5 83 aa1.7□□□□□ -2.14
TRAPPC13-209ENST00000508304 F8W1H4 67 aa1.7□□□□□ -2.14
TRAPPC13-209ENST00000508304 TNFSF15O95150 251 aa1.7□□□□□ -2.14
TRAPPC13-209ENST00000508304 OR2H2O95918 312 aa1.7□□□□□ -2.14
TRAPPC13-209ENST00000508304 IL9P15248 144 aa1.7□□□□□ -2.14
TRAPPC13-209ENST00000508304 KRTAP13-4Q3LI77 160 aa1.7□□□□□ -2.14
TRAPPC13-209ENST00000508304 OR5A2Q8NGI9 324 aa1.7□□□□□ -2.14
TRAPPC13-209ENST00000508304 DIRC1Q969H9 104 aa1.7□□□□□ -2.14
TRAPPC13-209ENST00000508304 MAGOHBQ96A72 148 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-209ENST00000508304 FAM107BQ9H098 131 aa1.7□□□□□ -2.14
TRAPPC13-209ENST00000508304 ORMDL1Q9P0S3 153 aa1.7□□□□□ -2.14
TRAPPC13-209ENST00000508304 KIAA1107Q9UPP5 1409 aa1.7□□□□□ -2.14
TRAPPC13-209ENST00000508304 HIGD1AQ9Y241 93 aa1.7□□□□□ -2.14
TRAPPC13-209ENST00000508304 DLC1Q96QB1 1528 aa1.7□□□□□ -2.14
TRAPPC13-209ENST00000508304 IGKV2-40A0A087WW87 121 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 A0A087WX48 190 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 IGKV3D-7A0A0C4DH55 119 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 IGKV3OR2-268A0A0C4DH90 116 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 IGKV2-29A2NJV5 120 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 J3QKU1 62 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 MRPS14O60783 128 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 DNAL4O96015 105 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 IGKV2D-40P01614 121 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 TRACP01848 142 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 RPL22P35268 128 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 KRTAP12-1P59990 96 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 HSD17B12Q53GQ0 312 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 PCOTHQ58A44 107 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 TMEM14EPQ6UXP3 125 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 OR5AS1Q8N127 324 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 Q8N2B8 174 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 MORN4Q8NDC4 146 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 CLEC2BQ92478 149 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 NIT2Q9NQR4 276 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 CDC42SE1Q9NRR8 79 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 COPZ2Q9P299 210 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 HSPB8Q9UJY1 196 aa1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 SOX21Q9Y651 276 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-209ENST00000508304 DSPPQ9NZW4 1301 aa1.68□□□□□ -2.14
TRAPPC13-209ENST00000508304 COL11A1P12107 1806 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-209ENST00000508304 B4DSR2 109 aa1.68□□□□□ -2.14
TRAPPC13-209ENST00000508304 C5orf67F2Z3F1 127 aa1.68□□□□□ -2.14
TRAPPC13-209ENST00000508304 H3BRM9 83 aa1.68□□□□□ -2.14
TRAPPC13-209ENST00000508304 SMIM24O75264 130 aa1.68□□□□□ -2.14
TRAPPC13-209ENST00000508304 IGLV1-51P01701 117 aa1.68□□□□□ -2.14
TRAPPC13-209ENST00000508304 MT-ND4LP03901 98 aa1.68□□□□□ -2.14
TRAPPC13-209ENST00000508304 SAA1P0DJI8 122 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-209ENST00000508304 RNASE3P12724 160 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-209ENST00000508304 DIAPH2-AS1Q14236 149 aa1.68□□□□□ -2.14
TRAPPC13-209ENST00000508304 KRTAP6-3Q3LI67 103 aa1.68□□□□□ -2.14
TRAPPC13-209ENST00000508304 CST11Q9H112 138 aa1.68□□□□□ -2.14
TRAPPC13-209ENST00000508304 TRPM1Q7Z4N2 1603 aa1.68□□□□□ -2.14
TRAPPC13-209ENST00000508304 TCOF1Q13428 1488 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-209ENST00000508304 ALPK2Q86TB3 2170 aa1.68□□□□□ -2.14
TRAPPC13-209ENST00000508304 NISCHQ9Y2I1 1504 aa1.67□□□□□ -2.14
TRAPPC13-209ENST00000508304 C3orf85A0A1B0GTC6 90 aa1.67□□□□□ -2.14
TRAPPC13-209ENST00000508304 C9orf170A2RU37 121 aa1.67□□□□□ -2.14
TRAPPC13-209ENST00000508304 J3QR89 54 aa1.67□□□□□ -2.14
TRAPPC13-209ENST00000508304 SCTP09683 121 aa1.67□□□□□ -2.14
TRAPPC13-209ENST00000508304 COX4I1P13073 169 aa1.67□□□□□ -2.14
TRAPPC13-209ENST00000508304 FOXA3P55318 350 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-209ENST00000508304 CASC2Q6XLA1 102 aa1.67□□□□□ -2.14
TRAPPC13-209ENST00000508304 ZNF833PQ6ZTB9 187 aa1.67□□□□□ -2.14
TRAPPC13-209ENST00000508304 C15orf53Q8NAA6 179 aa1.67□□□□□ -2.14
TRAPPC13-209ENST00000508304 TCEAL4Q96EI5 215 aa1.67□□□□□ -2.14
TRAPPC13-209ENST00000508304 TSC22D3Q99576 134 aa1.67□□□□□ -2.14
TRAPPC13-209ENST00000508304 BANF2Q9H503 90 aa1.67□□□□□ -2.14
TRAPPC13-209ENST00000508304 TAF9BQ9HBM6 251 aa1.67□□□□□ -2.14
TRAPPC13-209ENST00000508304 FKBP11Q9NYL4 201 aa1.67□□□□□ -2.14
TRAPPC13-209ENST00000508304 CHCHD2Q9Y6H1 151 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-209ENST00000508304 ANKRD31Q8N7Z5 1873 aa1.67□□□□□ -2.14
TRAPPC13-209ENST00000508304 IGKV3-7A0A075B6H7 116 aa1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 M0R2Z0 102 aa1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 UQCRQO14949 82 aa1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 CCL16O15467 120 aa1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 HBDP02042 147 aa1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 HMGN1P05114 100 aa1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 HIST1H1BP16401 226 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 MPV17LQ2QL34 196 aa1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 SMIM21Q3B7S5 101 aa1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 CCDC58Q4VC31 144 aa1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 TMEM244Q5VVB8 128 aa1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 HAGHLQ6PII5 290 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 GLIPR1L1Q6UWM5 242 aa1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 Q8TAT8 98 aa1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 NAT14Q8WUY8 206 aa1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 PFDN5Q99471 154 aa1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 SMIM3Q9BZL3 60 aa1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 MED23Q9ULK4 1368 aa1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 ARFGEF3Q5TH69 2177 aa1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 INTS1Q8N201 2190 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-209ENST00000508304 SDK1Q7Z5N4 2213 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms