RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 UPK2O00526 184 aa2.96□□□□□ -1.94
HERC4-213ENST00000506515 CREBL2O60519 120 aaPredicted RBP2.96□□□□□ -1.94
HERC4-213ENST00000506515 DHFRP00374 187 aa2.96□□□□□ -1.94
HERC4-213ENST00000506515 IFNA21P01568 189 aa2.96□□□□□ -1.94
HERC4-213ENST00000506515 IFNA17P01571 189 aa2.96□□□□□ -1.94
HERC4-213ENST00000506515 TTRP02766 147 aa2.96□□□□□ -1.94
HERC4-213ENST00000506515 ISG15P05161 165 aa2.96□□□□□ -1.94
HERC4-213ENST00000506515 ATF1P18846 271 aa2.96□□□□□ -1.94
HERC4-213ENST00000506515 TMEM241Q24JQ0 296 aa2.96□□□□□ -1.94
HERC4-213ENST00000506515 DEFB114Q30KQ6 69 aa2.96□□□□□ -1.94
HERC4-213ENST00000506515 LGALS9BQ3B8N2 356 aa2.96□□□□□ -1.94
HERC4-213ENST00000506515 UBE2NLQ5JXB2 153 aa2.96□□□□□ -1.94
HERC4-213ENST00000506515 ZNF322Q6U7Q0 402 aaPredicted RBP2.96□□□□□ -1.94
HERC4-213ENST00000506515 TCF23Q7RTU1 214 aa2.96□□□□□ -1.94
HERC4-213ENST00000506515 DRAXINQ8NBI3 349 aaPredicted RBP2.96□□□□□ -1.94
HERC4-213ENST00000506515 MRPS24Q96EL2 167 aaKnown RBP2.96□□□□□ -1.94
HERC4-213ENST00000506515 FMC1Q96HJ9 113 aa2.96□□□□□ -1.94
HERC4-213ENST00000506515 NXF2Q9GZY0 626 aaKnown RBP2.96□□□□□ -1.94
HERC4-213ENST00000506515 HERC1Q15751 4861 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 A0A1B0GW15 77 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 METTL15A6NJ78 407 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 FAM223BA6NKX1 122 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 H0YJX3 145 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 FXYD1O00168 92 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 GNGT2O14610 69 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 CYB5BO43169 146 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 NDUFA3O95167 84 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 IFNA10P01566 189 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 INAFM2P0DMQ5 153 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 M6PRP20645 277 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 BLVRBP30043 206 aaPredicted RBP2.95□□□□□ -1.94
HERC4-213ENST00000506515 GNG10P50151 68 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 VSNL1P62760 191 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 TPBGQ13641 420 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 RSU1Q15404 277 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 MPV17LQ2QL34 196 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 GPHB5Q86YW7 130 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 FAM223AQ8IWN6 122 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 DEFB125Q8N687 156 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 OR4A5Q8NH83 315 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 GALMQ96C23 342 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 YPEL4Q96NS1 127 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 GPER1Q99527 375 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 NABP2Q9BQ15 211 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 HSPB9Q9BQS6 159 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 CMTM6Q9NX76 183 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 TAS2R1Q9NYW7 299 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 ABRACLQ9P1F3 81 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 TRAPPC2LQ9UL33 140 aa2.95□□□□□ -1.94
HERC4-213ENST00000506515 VPS13DQ5THJ4 4388 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 TRAV10A0A0B4J240 114 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 LOC100506127A0A0U1RQW1 187 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 A0A1B0GTI1 187 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 A0A1W2PNN7 141 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 IGLL5B9A064 214 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 YPEL1O60688 119 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 MRPS14O60783 128 aaKnown RBP2.94□□□□□ -1.94
HERC4-213ENST00000506515 GGCTO75223 188 aaKnown RBP2.94□□□□□ -1.94
HERC4-213ENST00000506515 DEDDO75618 318 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 FADS2O95864 444 aaKnown RBP2.94□□□□□ -1.94
HERC4-213ENST00000506515 CD2P06729 351 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 GTF2F2P13984 249 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 CBLN1P23435 193 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 MAGEA2P43356 314 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 REG1BP48304 166 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 CXCR4P61073 352 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 FXYD3Q14802 87 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 KISS1Q15726 138 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 LTC4SQ16873 150 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 GID4Q8IVV7 300 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 LFNGQ8NES3 379 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 OR51A2Q8NGJ7 313 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 NEK7Q8TDX7 302 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 TVP23CQ96ET8 276 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 YPEL2Q96QA6 119 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 AMELYQ99218 206 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 METTL9Q9H1A3 318 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 TMBIM4Q9HC24 238 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 SAR1AQ9NR31 198 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 FGFR1OP2Q9NVK5 253 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 MRPL27Q9P0M9 148 aaKnown RBP2.94□□□□□ -1.94
HERC4-213ENST00000506515 RBM12B-AS1Q9P1G2 102 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 JPT1Q9UK76 154 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 SAMHD1Q9Y3Z3 626 aaKnown RBP2.94□□□□□ -1.94
HERC4-213ENST00000506515 PKHD1P08F94 4074 aa2.94□□□□□ -1.94
HERC4-213ENST00000506515 SRRM2Q9UQ35 2752 aaKnown RBP2.94□□□□□ -1.94
HERC4-213ENST00000506515 OR4C46A6NHA9 309 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 A6NIN4 97 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 AIPO00170 330 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 ISLRO14498 428 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 ITGB1BP1O14713 200 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 GYG2O15488 501 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 SULT1B1O43704 296 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 EDF1O60869 148 aaKnown RBP2.93□□□□□ -1.94
HERC4-213ENST00000506515 OR7C1O76099 320 aaPredicted RBP2.93□□□□□ -1.94
HERC4-213ENST00000506515 IGHV3-7P01780 117 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 APOA2P02652 100 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 COX4I1P13073 169 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 HRES1P13985 223 aa2.93□□□□□ -1.94
HERC4-213ENST00000506515 HIST1H1BP16401 226 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms