RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 IGHV7-4-1A0A0J9YVY3 117 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 CTXND1A0A1B0GTU2 59 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 A0A1W2PPV4 95 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 A0A1W2PS18 150 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 A4D1N5 150 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 C2orf70A6NJV1 201 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 OVOL1O14753 267 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 PPP1R2P9O14990 202 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 MRPS12O15235 138 aaKnown RBP5.47□□□□□ -1.53
NUP54-204ENST00000506098 CSN3P07498 182 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 PTTG1IPP53801 180 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 ZNF726P1Q15940 193 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 C1orf194Q5T5A4 169 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 MORN5Q5VZ52 161 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 TMEM88Q6PEY1 159 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 ZFP82Q8N141 532 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 LINC00482Q8N8I6 264 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 LYPD6BQ8NI32 183 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 FAM167A-AS1Q96KT0 104 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 GPR82Q96P67 336 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 UHRF2Q96PU4 802 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 MDFIQ99750 246 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 C20orf24Q9BUV8 137 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 PBDC1Q9BVG4 233 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 SSBP4Q9BWG4 385 aaPredicted RBP5.47□□□□□ -1.53
NUP54-204ENST00000506098 DOK5Q9P104 306 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 ANK2Q01484 3957 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 NOTCH3Q9UM47 2321 aa5.47□□□□□ -1.53
NUP54-204ENST00000506098 IGHV3OR16-8A0A075B7F1 116 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 TRAV1-1A0A0B4J248 108 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 KIR2DL5BA0A0G2JN68 375 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 KIR2DL5BA0A0G2JPC4 375 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 OR11H12B2RN74 326 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 M0QZ24 198 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 CHEK1O14757 476 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 SCGB1D1O95968 90 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 APOHP02749 345 aaPredicted RBP5.46□□□□□ -1.54
NUP54-204ENST00000506098 PF4P02776 101 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 CD5P06127 495 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 OR10J4P0C629 311 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 CBLN1P23435 193 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 AKR1C3P42330 323 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 TAS2R45P59539 299 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 KHDC3LQ587J8 217 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 SPATA31B1PQ5VZV4 182 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 ADAMTSL5Q6ZMM2 481 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 PQLC2Q6ZP29 291 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 MIR17HGQ75NE6 70 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 KIR2DL5AQ8N109 375 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 WFDC9Q8NEX5 89 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 OR11H2Q8NH07 326 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 RPUSD4Q96CM3 377 aaKnown RBP5.46□□□□□ -1.54
NUP54-204ENST00000506098 SCRT1Q9BWW7 348 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 SLC25A2Q9BXI2 301 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 VCX2Q9H322 139 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 HRH4Q9H3N8 390 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 TMEM231Q9H6L2 316 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 TMEM14CQ9P0S9 112 aa5.46□□□□□ -1.54
NUP54-204ENST00000506098 TRAV5A0A0B4J249 113 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 ZNF705EA8MWA4 302 aaPredicted RBP5.45□□□□□ -1.54
NUP54-204ENST00000506098 F6UZH7 168 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 ZNF207O43670 478 aaKnown RBP5.45□□□□□ -1.54
NUP54-204ENST00000506098 CXorf1O96002 111 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 GP9P14770 177 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 EDN2P20800 178 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 PMS2P11Q13670 270 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 RHEBQ15382 184 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 OCIAD2Q56VL3 154 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 FAM90A2PQ658T7 463 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 BPIFA4PQ86YQ2 179 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 STXBP6Q8NFX7 210 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 OR10D4PQ8NGN7 298 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 FAM213BQ8TBF2 198 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 ZNF503Q96F45 646 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 GRAMD2BQ96HH9 432 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 ATG101Q9BSB4 218 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 ELOVL1Q9BW60 279 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 RHPN1-AS1Q9BWJ2 59 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 SLC25A22Q9H936 323 aa5.45□□□□□ -1.54
NUP54-204ENST00000506098 A0A087X0K7 114 aa5.44□□□□□ -1.54
NUP54-204ENST00000506098 MAP1LC3B2A6NCE7 125 aa5.44□□□□□ -1.54
NUP54-204ENST00000506098 HBE1P02100 147 aa5.44□□□□□ -1.54
NUP54-204ENST00000506098 ARL14EPLP0DKL9 152 aa5.44□□□□□ -1.54
NUP54-204ENST00000506098 IGLC2P0DOY2 106 aa5.44□□□□□ -1.54
NUP54-204ENST00000506098 HIST1H1EP10412 219 aaKnown RBP5.44□□□□□ -1.54
NUP54-204ENST00000506098 RPL7P18124 248 aaKnown RBP5.44□□□□□ -1.54
NUP54-204ENST00000506098 IQCJQ1A5X6 159 aa5.44□□□□□ -1.54
NUP54-204ENST00000506098 SIGLEC15Q6ZMC9 328 aa5.44□□□□□ -1.54
NUP54-204ENST00000506098 OR8I2Q8N0Y5 310 aa5.44□□□□□ -1.54
NUP54-204ENST00000506098 HIST3H2BBQ8N257 126 aa5.44□□□□□ -1.54
NUP54-204ENST00000506098 ZNF664Q8N3J9 261 aa5.44□□□□□ -1.54
NUP54-204ENST00000506098 NHLRC2Q8NBF2 726 aa5.44□□□□□ -1.54
NUP54-204ENST00000506098 SPATA3Q8NHX4 192 aa5.44□□□□□ -1.54
NUP54-204ENST00000506098 SFRP2Q96HF1 295 aa5.44□□□□□ -1.54
NUP54-204ENST00000506098 C17orf77Q96MU5 243 aa5.44□□□□□ -1.54
NUP54-204ENST00000506098 C20orf144Q9BQM9 153 aa5.44□□□□□ -1.54
NUP54-204ENST00000506098 PAXXQ9BUH6 204 aa5.44□□□□□ -1.54
NUP54-204ENST00000506098 MAP1LC3BQ9GZQ8 125 aa5.44□□□□□ -1.54
NUP54-204ENST00000506098 AURKAIP1Q9NWT8 199 aaPredicted RBP5.44□□□□□ -1.54
NUP54-204ENST00000506098 SMAD5-AS1Q9Y6J3 95 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 288.3 ms