RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 TEX48A0A1B0GUV7 120 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 TMEM189A5PLL7 270 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 SMIM9A6NGZ8 99 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 IGLL5B9A064 214 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 OR5G3P0C626 314 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 RBMY1A1P0DJD3 496 aaKnown RBP7.55□□□□□ -1.2
NR1I3-222ENST00000506018 RBMY1CP0DJD4 496 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 ORM2P19652 201 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 HLA-DMBP28068 263 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 SULT1A2P50226 295 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 TAS2R45P59539 299 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 BLOC1S1P78537 153 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 RBMY1FQ15415 496 aaKnown RBP7.55□□□□□ -1.2
NR1I3-222ENST00000506018 C10orf113Q5VZT2 155 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 ALKAL2Q6UX46 152 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 TMEM182Q6ZP80 229 aaPredicted RBP7.55□□□□□ -1.2
NR1I3-222ENST00000506018 ZNF680Q8NEM1 530 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 OR4B1Q8NGF8 309 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 OR10G4Q8NGN3 311 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 OR10G9Q8NGN4 311 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 OR10G7Q8NGN6 311 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 CLUHP3Q96NS8 147 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 MRPL32Q9BYC8 188 aaKnown RBP7.55□□□□□ -1.2
NR1I3-222ENST00000506018 ACTR3CQ9C0K3 210 aaPredicted RBP7.55□□□□□ -1.2
NR1I3-222ENST00000506018 SH3BGRL3Q9H299 93 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 X6R8D5 127 aa7.55□□□□□ -1.2
NR1I3-222ENST00000506018 ZNF98A6NK75 572 aa7.54□□□□□ -1.2
NR1I3-222ENST00000506018 IGKV3-20P01619 116 aa7.54□□□□□ -1.2
NR1I3-222ENST00000506018 SAT2Q96F10 170 aaPredicted RBP7.54□□□□□ -1.2
NR1I3-222ENST00000506018 NEU1Q99519 415 aa7.54□□□□□ -1.2
NR1I3-222ENST00000506018 HIGD1AQ9Y241 93 aa7.54□□□□□ -1.2
NR1I3-222ENST00000506018 GOLT1BQ9Y3E0 138 aa7.54□□□□□ -1.2
NR1I3-222ENST00000506018 HYDINQ4G0P3 5121 aa7.53□□□□□ -1.2
NR1I3-222ENST00000506018 SOCS3O14543 225 aa7.53□□□□□ -1.2
NR1I3-222ENST00000506018 HBE1P02100 147 aa7.53□□□□□ -1.2
NR1I3-222ENST00000506018 GATA2P23769 480 aaPredicted RBP7.53□□□□□ -1.2
NR1I3-222ENST00000506018 CDC34P49427 236 aaPredicted RBP7.53□□□□□ -1.2
NR1I3-222ENST00000506018 PSG9Q00887 426 aa7.53□□□□□ -1.2
NR1I3-222ENST00000506018 FAM78BQ5VT40 261 aa7.53□□□□□ -1.2
NR1I3-222ENST00000506018 RFNGQ9Y644 331 aa7.53□□□□□ -1.2
NR1I3-222ENST00000506018 IGHV3OR16-12A0A075B7B8 117 aa7.52□□□□□ -1.21
NR1I3-222ENST00000506018 CTXND1A0A1B0GTU2 59 aa7.52□□□□□ -1.21
NR1I3-222ENST00000506018 EREGO14944 169 aa7.52□□□□□ -1.21
NR1I3-222ENST00000506018 DUSP14O95147 198 aaKnown RBP7.52□□□□□ -1.21
NR1I3-222ENST00000506018 AMBPP02760 352 aa7.52□□□□□ -1.21
NR1I3-222ENST00000506018 H2AFB1P0C5Y9 115 aa7.52□□□□□ -1.21
NR1I3-222ENST00000506018 SPART-AS1P0CW21 52 aa7.52□□□□□ -1.21
NR1I3-222ENST00000506018 RPL7P18124 248 aaKnown RBP7.52□□□□□ -1.21
NR1I3-222ENST00000506018 GDF5OSQ5U4N7 250 aa7.52□□□□□ -1.21
NR1I3-222ENST00000506018 FAM122CQ6P4D5 195 aa7.52□□□□□ -1.21
NR1I3-222ENST00000506018 ZNF705AQ6ZN79 300 aaPredicted RBP7.52□□□□□ -1.21
NR1I3-222ENST00000506018 Q6ZTC4 211 aa7.52□□□□□ -1.21
NR1I3-222ENST00000506018 LINC00305Q7Z4B0 112 aa7.52□□□□□ -1.21
NR1I3-222ENST00000506018 FAM213BQ8TBF2 198 aa7.52□□□□□ -1.21
NR1I3-222ENST00000506018 DOK5Q9P104 306 aa7.52□□□□□ -1.21
NR1I3-222ENST00000506018 FUT9Q9Y231 359 aa7.52□□□□□ -1.21
NR1I3-222ENST00000506018 IGHV4-4A0A075B6R2 117 aa7.51□□□□□ -1.21
NR1I3-222ENST00000506018 DEFB131BA0A096LNP1 70 aa7.51□□□□□ -1.21
NR1I3-222ENST00000506018 A0A0J9YX75 114 aa7.51□□□□□ -1.21
NR1I3-222ENST00000506018 ZNF705FA8MVS1 300 aaPredicted RBP7.51□□□□□ -1.21
NR1I3-222ENST00000506018 ZNF705DP0CH99 300 aaPredicted RBP7.51□□□□□ -1.21
NR1I3-222ENST00000506018 ZNF705BP0CI00 300 aaPredicted RBP7.51□□□□□ -1.21
NR1I3-222ENST00000506018 FXYD7P58549 80 aa7.51□□□□□ -1.21
NR1I3-222ENST00000506018 KHDC3LQ587J8 217 aa7.51□□□□□ -1.21
NR1I3-222ENST00000506018 PQLC2Q6ZP29 291 aa7.51□□□□□ -1.21
NR1I3-222ENST00000506018 RPP25LQ8N5L8 163 aaKnown RBP7.51□□□□□ -1.21
NR1I3-222ENST00000506018 TMEM208Q9BTX3 173 aa7.51□□□□□ -1.21
NR1I3-222ENST00000506018 SLC25A39Q9BZJ4 359 aaPredicted RBP7.51□□□□□ -1.21
NR1I3-222ENST00000506018 APLNQ9ULZ1 77 aa7.51□□□□□ -1.21
NR1I3-222ENST00000506018 H3BRN7 92 aa7.5□□□□□ -1.21
NR1I3-222ENST00000506018 RGS13O14921 159 aa7.5□□□□□ -1.21
NR1I3-222ENST00000506018 CXorf1O96002 111 aa7.5□□□□□ -1.21
NR1I3-222ENST00000506018 PPT1P50897 306 aa7.5□□□□□ -1.21
NR1I3-222ENST00000506018 EMP1P54849 157 aa7.5□□□□□ -1.21
NR1I3-222ENST00000506018 BPIFA4PQ86YQ2 179 aa7.5□□□□□ -1.21
NR1I3-222ENST00000506018 SFT2D1Q8WV19 159 aa7.5□□□□□ -1.21
NR1I3-222ENST00000506018 TMEM37Q8WXS4 190 aa7.5□□□□□ -1.21
NR1I3-222ENST00000506018 RAB24Q969Q5 203 aa7.5□□□□□ -1.21
NR1I3-222ENST00000506018 SHANK2-AS3Q9BTD1 123 aa7.5□□□□□ -1.21
NR1I3-222ENST00000506018 NDUFAF3Q9BU61 184 aa7.5□□□□□ -1.21
NR1I3-222ENST00000506018 PPP1R14DQ9NXH3 145 aa7.5□□□□□ -1.21
NR1I3-222ENST00000506018 MAP1LC3B2A6NCE7 125 aa7.49□□□□□ -1.21
NR1I3-222ENST00000506018 F6UB75 175 aa7.49□□□□□ -1.21
NR1I3-222ENST00000506018 STAG3L2P0CL84 134 aa7.49□□□□□ -1.21
NR1I3-222ENST00000506018 STAG3L3P0CL85 134 aa7.49□□□□□ -1.21
NR1I3-222ENST00000506018 DEFB1P60022 68 aa7.49□□□□□ -1.21
NR1I3-222ENST00000506018 IFITM2Q01629 132 aa7.49□□□□□ -1.21
NR1I3-222ENST00000506018 RRN3P1Q2M238 152 aa7.49□□□□□ -1.21
NR1I3-222ENST00000506018 C12orf74Q32Q52 190 aa7.49□□□□□ -1.21
NR1I3-222ENST00000506018 FAM74A1Q5RGS3 127 aa7.49□□□□□ -1.21
NR1I3-222ENST00000506018 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.49□□□□□ -1.21
NR1I3-222ENST00000506018 ZNF738Q8NE65 137 aa7.49□□□□□ -1.21
NR1I3-222ENST00000506018 MBD3L1Q8WWY6 194 aa7.49□□□□□ -1.21
NR1I3-222ENST00000506018 SCRT1Q9BWW7 348 aa7.49□□□□□ -1.21
NR1I3-222ENST00000506018 MAP1LC3BQ9GZQ8 125 aa7.49□□□□□ -1.21
NR1I3-222ENST00000506018 SLC35B3Q9H1N7 401 aa7.49□□□□□ -1.21
NR1I3-222ENST00000506018 TMEM167BQ9NRX6 74 aa7.49□□□□□ -1.21
NR1I3-222ENST00000506018 CELA1Q9UNI1 258 aa7.49□□□□□ -1.21
NR1I3-222ENST00000506018 TRAV1-1A0A0B4J248 108 aa7.48□□□□□ -1.21
NR1I3-222ENST00000506018 OR7C2O60412 319 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms