RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 RPL7P18124 248 aaKnown RBP8.41□□□□□ -1.06
KDM3B-203ENST00000505756 PDE6HQ13956 83 aa8.41□□□□□ -1.06
KDM3B-203ENST00000505756 LEMD1Q68G75 181 aa8.41□□□□□ -1.06
KDM3B-203ENST00000505756 BPIFA4PQ86YQ2 179 aa8.41□□□□□ -1.06
KDM3B-203ENST00000505756 FXYD5Q96DB9 178 aa8.41□□□□□ -1.06
KDM3B-203ENST00000505756 CSTL1Q9H114 145 aa8.41□□□□□ -1.06
KDM3B-203ENST00000505756 SPRY2O43597 315 aa8.4□□□□□ -1.06
KDM3B-203ENST00000505756 ZNF253O75346 499 aa8.4□□□□□ -1.06
KDM3B-203ENST00000505756 IFNA1P01562 189 aa8.4□□□□□ -1.06
KDM3B-203ENST00000505756 MEOX2P50222 304 aa8.4□□□□□ -1.06
KDM3B-203ENST00000505756 FGF8P55075 233 aaPredicted RBP8.4□□□□□ -1.06
KDM3B-203ENST00000505756 CCL20P78556 96 aa8.4□□□□□ -1.06
KDM3B-203ENST00000505756 DEFB135Q30KP9 77 aa8.4□□□□□ -1.06
KDM3B-203ENST00000505756 ZNF506Q5JVG8 444 aa8.4□□□□□ -1.06
KDM3B-203ENST00000505756 CASC10Q5T4H9 136 aa8.4□□□□□ -1.06
KDM3B-203ENST00000505756 COMMD7Q86VX2 200 aa8.4□□□□□ -1.06
KDM3B-203ENST00000505756 RNF183Q96D59 192 aa8.4□□□□□ -1.06
KDM3B-203ENST00000505756 PAXXQ9BUH6 204 aa8.4□□□□□ -1.06
KDM3B-203ENST00000505756 OR51M1Q9H341 326 aa8.4□□□□□ -1.06
KDM3B-203ENST00000505756 TRAV5A0A0B4J249 113 aa8.39□□□□□ -1.07
KDM3B-203ENST00000505756 LOC102723971A0A1B0GUV8 181 aa8.39□□□□□ -1.07
KDM3B-203ENST00000505756 A0A1W2PRE2 83 aa8.39□□□□□ -1.07
KDM3B-203ENST00000505756 OR7C2O60412 319 aa8.39□□□□□ -1.07
KDM3B-203ENST00000505756 HIST1H1EP10412 219 aaKnown RBP8.39□□□□□ -1.07
KDM3B-203ENST00000505756 SNRPD3P62318 126 aaKnown RBP8.39□□□□□ -1.07
KDM3B-203ENST00000505756 UBE2L3P68036 154 aaKnown RBP8.39□□□□□ -1.07
KDM3B-203ENST00000505756 GUK1Q16774 197 aa8.39□□□□□ -1.07
KDM3B-203ENST00000505756 STHQ8IWL8 128 aa8.39□□□□□ -1.07
KDM3B-203ENST00000505756 TCEAL7Q9BRU2 100 aa8.39□□□□□ -1.07
KDM3B-203ENST00000505756 NKX6-2Q9C056 277 aaPredicted RBP8.39□□□□□ -1.07
KDM3B-203ENST00000505756 RBFOX3A6NFN3 312 aa8.38□□□□□ -1.07
KDM3B-203ENST00000505756 HMGB3O15347 200 aaKnown RBP8.38□□□□□ -1.07
KDM3B-203ENST00000505756 MEF2BQ02080 365 aaPredicted RBP8.38□□□□□ -1.07
KDM3B-203ENST00000505756 PSMG4Q5JS54 123 aa8.38□□□□□ -1.07
KDM3B-203ENST00000505756 TRPT1Q86TN4 253 aaKnown RBP8.38□□□□□ -1.07
KDM3B-203ENST00000505756 CCDC28AQ8IWP9 274 aa8.38□□□□□ -1.07
KDM3B-203ENST00000505756 OR8I2Q8N0Y5 310 aa8.38□□□□□ -1.07
KDM3B-203ENST00000505756 LYPD1Q8N2G4 141 aa8.38□□□□□ -1.07
KDM3B-203ENST00000505756 IL17DQ8TAD2 202 aa8.38□□□□□ -1.07
KDM3B-203ENST00000505756 C17orf77Q96MU5 243 aa8.38□□□□□ -1.07
KDM3B-203ENST00000505756 TMPRSS5Q9H3S3 457 aa8.38□□□□□ -1.07
KDM3B-203ENST00000505756 STARD9Q9P2P6 4700 aa8.37□□□□□ -1.07
KDM3B-203ENST00000505756 TRBV19A0A075B6N1 114 aa8.37□□□□□ -1.07
KDM3B-203ENST00000505756 FAM74A7A6NL05 159 aa8.37□□□□□ -1.07
KDM3B-203ENST00000505756 EIF3GO75821 320 aaKnown RBP eCLIP8.37□□□□□ -1.07
KDM3B-203ENST00000505756 CA1P00915 261 aaPredicted RBP8.37□□□□□ -1.07
KDM3B-203ENST00000505756 PYYP10082 97 aa8.37□□□□□ -1.07
KDM3B-203ENST00000505756 ICAM4Q14773 271 aa8.37□□□□□ -1.07
KDM3B-203ENST00000505756 TOR2AQ5JU69 321 aa8.37□□□□□ -1.07
KDM3B-203ENST00000505756 SAMD13Q5VXD3 122 aa8.37□□□□□ -1.07
KDM3B-203ENST00000505756 ARL6IP6Q8N6S5 226 aa8.37□□□□□ -1.07
KDM3B-203ENST00000505756 GNG13Q9P2W3 67 aa8.37□□□□□ -1.07
KDM3B-203ENST00000505756 VAX2Q9UIW0 290 aa8.37□□□□□ -1.07
KDM3B-203ENST00000505756 CSMD3Q7Z407 3707 aa8.36□□□□□ -1.07
KDM3B-203ENST00000505756 A0A1B0GV50 99 aa8.36□□□□□ -1.07
KDM3B-203ENST00000505756 KNCNA6PVL3 124 aa8.36□□□□□ -1.07
KDM3B-203ENST00000505756 TMEM250H0YL14 139 aa8.36□□□□□ -1.07
KDM3B-203ENST00000505756 H3BQ15 152 aa8.36□□□□□ -1.07
KDM3B-203ENST00000505756 OR10J4P0C629 311 aa8.36□□□□□ -1.07
KDM3B-203ENST00000505756 NBEAP1P0C6P0 100 aa8.36□□□□□ -1.07
KDM3B-203ENST00000505756 ID1P41134 155 aa8.36□□□□□ -1.07
KDM3B-203ENST00000505756 GALR1P47211 349 aa8.36□□□□□ -1.07
KDM3B-203ENST00000505756 PEA15Q15121 130 aa8.36□□□□□ -1.07
KDM3B-203ENST00000505756 ACTL10Q5JWF8 245 aa8.36□□□□□ -1.07
KDM3B-203ENST00000505756 ZFAND6Q6FIF0 208 aa8.36□□□□□ -1.07
KDM3B-203ENST00000505756 MORN3Q6PF18 240 aaPredicted RBP8.36□□□□□ -1.07
KDM3B-203ENST00000505756 C11orf52Q96A22 123 aa8.36□□□□□ -1.07
KDM3B-203ENST00000505756 ZNF586Q9NXT0 402 aa8.36□□□□□ -1.07
KDM3B-203ENST00000505756 YTHDF2Q9Y5A9 579 aaKnown RBP8.36□□□□□ -1.07
KDM3B-203ENST00000505756 A0A0J9YWU9 116 aa8.35□□□□□ -1.07
KDM3B-203ENST00000505756 GGTLC3B5MD39 225 aa8.35□□□□□ -1.07
KDM3B-203ENST00000505756 ISLRO14498 428 aa8.35□□□□□ -1.07
KDM3B-203ENST00000505756 SOCS3O14543 225 aa8.35□□□□□ -1.07
KDM3B-203ENST00000505756 NDUFB4O95168 129 aa8.35□□□□□ -1.07
KDM3B-203ENST00000505756 RARRES2Q99969 163 aa8.35□□□□□ -1.07
KDM3B-203ENST00000505756 SLC50A1Q9BRV3 221 aa8.35□□□□□ -1.07
KDM3B-203ENST00000505756 CLEC5AQ9NY25 188 aa8.35□□□□□ -1.07
KDM3B-203ENST00000505756 RYR3Q15413 4870 aa8.34□□□□□ -1.07
KDM3B-203ENST00000505756 C11orf94C9JXX5 98 aa8.34□□□□□ -1.07
KDM3B-203ENST00000505756 F6UZH7 168 aa8.34□□□□□ -1.07
KDM3B-203ENST00000505756 PDE6DO43924 150 aa8.34□□□□□ -1.07
KDM3B-203ENST00000505756 PAGE4O60829 102 aa8.34□□□□□ -1.07
KDM3B-203ENST00000505756 ATF4P18848 351 aaPredicted RBP8.34□□□□□ -1.07
KDM3B-203ENST00000505756 SRSF3P84103 164 aaKnown RBP8.34□□□□□ -1.07
KDM3B-203ENST00000505756 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.34□□□□□ -1.07
KDM3B-203ENST00000505756 SLC7A5P1Q8MH63 180 aa8.34□□□□□ -1.07
KDM3B-203ENST00000505756 LINC00052Q96N35 136 aa8.34□□□□□ -1.07
KDM3B-203ENST00000505756 OTORQ9NRC9 128 aa8.34□□□□□ -1.07
KDM3B-203ENST00000505756 C9JQL5 133 aa8.33□□□□□ -1.08
KDM3B-203ENST00000505756 H3BMM0 161 aa8.33□□□□□ -1.08
KDM3B-203ENST00000505756 SLC17A3O00476 420 aa8.33□□□□□ -1.08
KDM3B-203ENST00000505756 SRP19P09132 144 aaKnown RBP8.33□□□□□ -1.08
KDM3B-203ENST00000505756 GIG44P09565 113 aaPredicted RBP8.33□□□□□ -1.08
KDM3B-203ENST00000505756 HLA-DRB4P13762 266 aa8.33□□□□□ -1.08
KDM3B-203ENST00000505756 NUTF2P61970 127 aaKnown RBP8.33□□□□□ -1.08
KDM3B-203ENST00000505756 PSG9Q00887 426 aa8.33□□□□□ -1.08
KDM3B-203ENST00000505756 C10orf91Q5T1B1 145 aa8.33□□□□□ -1.08
KDM3B-203ENST00000505756 FOXI2Q6ZQN5 318 aa8.33□□□□□ -1.08
KDM3B-203ENST00000505756 IQCF2Q8IXL9 164 aa8.33□□□□□ -1.08
KDM3B-203ENST00000505756 C5orf17Q8NAS9 161 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms