RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 KHDC3LQ587J8 217 aa12.28□□□□□ -0.44
SYNE4-207ENST00000505054 AKAP14Q86UN6 197 aa12.28□□□□□ -0.44
SYNE4-207ENST00000505054 OR4B1Q8NGF8 309 aa12.28□□□□□ -0.44
SYNE4-207ENST00000505054 BLNKQ8WV28 456 aa12.28□□□□□ -0.44
SYNE4-207ENST00000505054 RNF141Q8WVD5 230 aa12.28□□□□□ -0.44
SYNE4-207ENST00000505054 RPUSD4Q96CM3 377 aaKnown RBP12.28□□□□□ -0.44
SYNE4-207ENST00000505054 A0A0D9SG52 128 aa12.27□□□□□ -0.45
SYNE4-207ENST00000505054 ZNF705FA8MVS1 300 aaPredicted RBP12.27□□□□□ -0.45
SYNE4-207ENST00000505054 PRAC2D3DTV9 90 aa12.27□□□□□ -0.45
SYNE4-207ENST00000505054 BCL2L11O43521 198 aa12.27□□□□□ -0.45
SYNE4-207ENST00000505054 NBEAP1P0C6P0 100 aa12.27□□□□□ -0.45
SYNE4-207ENST00000505054 CNN1P51911 297 aaKnown RBP12.27□□□□□ -0.45
SYNE4-207ENST00000505054 TAS2R45P59539 299 aa12.27□□□□□ -0.45
SYNE4-207ENST00000505054 UBE2L3P68036 154 aaKnown RBP12.27□□□□□ -0.45
SYNE4-207ENST00000505054 AMTNQ6UX39 209 aa12.27□□□□□ -0.45
SYNE4-207ENST00000505054 OR8A1Q8NGG7 326 aa12.27□□□□□ -0.45
SYNE4-207ENST00000505054 A0A1W2PPV4 95 aa12.26□□□□□ -0.45
SYNE4-207ENST00000505054 M0R3E3 92 aa12.26□□□□□ -0.45
SYNE4-207ENST00000505054 MBP02144 154 aa12.26□□□□□ -0.45
SYNE4-207ENST00000505054 C1QBP02746 253 aa12.26□□□□□ -0.45
SYNE4-207ENST00000505054 CDC34P49427 236 aaPredicted RBP12.26□□□□□ -0.45
SYNE4-207ENST00000505054 FXYD7P58549 80 aa12.26□□□□□ -0.45
SYNE4-207ENST00000505054 HIST1H1AQ02539 215 aaPredicted RBP12.26□□□□□ -0.45
SYNE4-207ENST00000505054 TMEM41BQ5BJD5 291 aa12.26□□□□□ -0.45
SYNE4-207ENST00000505054 CSNK1G2-AS1Q8NCQ2 148 aa12.26□□□□□ -0.45
SYNE4-207ENST00000505054 LINC00476Q8WZB0 136 aa12.26□□□□□ -0.45
SYNE4-207ENST00000505054 PHYHIPLQ96FC7 376 aa12.26□□□□□ -0.45
SYNE4-207ENST00000505054 SLC35B3Q9H1N7 401 aa12.26□□□□□ -0.45
SYNE4-207ENST00000505054 CLEC5AQ9NY25 188 aa12.26□□□□□ -0.45
SYNE4-207ENST00000505054 HMGB3O15347 200 aaKnown RBP12.25□□□□□ -0.45
SYNE4-207ENST00000505054 DUSP14O95147 198 aaKnown RBP12.25□□□□□ -0.45
SYNE4-207ENST00000505054 NUTF2P61970 127 aaKnown RBP12.25□□□□□ -0.45
SYNE4-207ENST00000505054 PSG9Q00887 426 aa12.25□□□□□ -0.45
SYNE4-207ENST00000505054 TMUB2Q71RG4 321 aa12.25□□□□□ -0.45
SYNE4-207ENST00000505054 SSX7Q7RTT5 188 aa12.25□□□□□ -0.45
SYNE4-207ENST00000505054 EXOC3-AS1Q8N2X6 119 aa12.25□□□□□ -0.45
SYNE4-207ENST00000505054 XCL2Q9UBD3 114 aa12.25□□□□□ -0.45
SYNE4-207ENST00000505054 KANTRA0A1W2PQU2 76 aa12.24□□□□□ -0.45
SYNE4-207ENST00000505054 PQLC2Q6ZP29 291 aa12.24□□□□□ -0.45
SYNE4-207ENST00000505054 RAB24Q969Q5 203 aa12.24□□□□□ -0.45
SYNE4-207ENST00000505054 MRPL53Q96EL3 112 aaKnown RBP12.24□□□□□ -0.45
SYNE4-207ENST00000505054 ZNF471Q9BX82 626 aaPredicted RBP12.24□□□□□ -0.45
SYNE4-207ENST00000505054 STAG3L2P0CL84 134 aa12.23□□□□□ -0.45
SYNE4-207ENST00000505054 STAG3L3P0CL85 134 aa12.23□□□□□ -0.45
SYNE4-207ENST00000505054 ICAM4Q14773 271 aa12.23□□□□□ -0.45
SYNE4-207ENST00000505054 ZNF726P1Q15940 193 aa12.23□□□□□ -0.45
SYNE4-207ENST00000505054 LGALSLQ3ZCW2 172 aaPredicted RBP12.23□□□□□ -0.45
SYNE4-207ENST00000505054 C1QTNF4Q9BXJ3 329 aa12.23□□□□□ -0.45
SYNE4-207ENST00000505054 PFDN1O60925 122 aa12.22□□□□□ -0.45
SYNE4-207ENST00000505054 ARL14EPLP0DKL9 152 aa12.22□□□□□ -0.45
SYNE4-207ENST00000505054 OR11H2Q8NH07 326 aa12.22□□□□□ -0.45
SYNE4-207ENST00000505054 RARRES2Q99969 163 aa12.22□□□□□ -0.45
SYNE4-207ENST00000505054 ACTR3CQ9C0K3 210 aaPredicted RBP12.22□□□□□ -0.45
SYNE4-207ENST00000505054 AAMDCQ9H7C9 122 aa12.22□□□□□ -0.45
SYNE4-207ENST00000505054 PLA2G2EQ9NZK7 142 aa12.22□□□□□ -0.45
SYNE4-207ENST00000505054 PRELID1Q9Y255 219 aa12.22□□□□□ -0.45
SYNE4-207ENST00000505054 FRAS1Q86XX4 4008 aa12.21□□□□□ -0.45
SYNE4-207ENST00000505054 ZNF705EA8MWA4 302 aaPredicted RBP12.21□□□□□ -0.45
SYNE4-207ENST00000505054 M0R2Z0 102 aa12.21□□□□□ -0.45
SYNE4-207ENST00000505054 RANP62826 216 aaKnown RBP12.21□□□□□ -0.45
SYNE4-207ENST00000505054 AKR1C8PQ5T2L2 129 aa12.21□□□□□ -0.45
SYNE4-207ENST00000505054 HYLS1Q96M11 299 aa12.21□□□□□ -0.45
SYNE4-207ENST00000505054 X6R8D5 127 aa12.21□□□□□ -0.45
SYNE4-207ENST00000505054 NPIPB6E9PJ23 425 aa12.2□□□□□ -0.46
SYNE4-207ENST00000505054 BOLA2-SMG1P6H3BVE0 249 aa12.2□□□□□ -0.46
SYNE4-207ENST00000505054 GCHFRP30047 84 aa12.2□□□□□ -0.46
SYNE4-207ENST00000505054 SPINK13Q1W4C9 94 aa12.2□□□□□ -0.46
SYNE4-207ENST00000505054 LYPD1Q8N2G4 141 aa12.2□□□□□ -0.46
SYNE4-207ENST00000505054 OR10J6PQ8NGY7 276 aa12.2□□□□□ -0.46
SYNE4-207ENST00000505054 Q9H3A6 140 aa12.2□□□□□ -0.46
SYNE4-207ENST00000505054 A0A0J9YWU9 116 aa12.19□□□□□ -0.46
SYNE4-207ENST00000505054 CTXND1A0A1B0GTU2 59 aa12.19□□□□□ -0.46
SYNE4-207ENST00000505054 CRXO43186 299 aaPredicted RBP12.19□□□□□ -0.46
SYNE4-207ENST00000505054 SEC11BP0C7V7 166 aa12.19□□□□□ -0.46
SYNE4-207ENST00000505054 ZNF705AQ6ZN79 300 aaPredicted RBP12.19□□□□□ -0.46
SYNE4-207ENST00000505054 BAP18Q8IXM2 172 aa12.19□□□□□ -0.46
SYNE4-207ENST00000505054 C9orf62Q8N4C0 152 aa12.19□□□□□ -0.46
SYNE4-207ENST00000505054 STOML3Q8TAV4 291 aa12.19□□□□□ -0.46
SYNE4-207ENST00000505054 SUN5Q8TC36 379 aa12.19□□□□□ -0.46
SYNE4-207ENST00000505054 KRTAP17-1Q9BYP8 105 aa12.19□□□□□ -0.46
SYNE4-207ENST00000505054 IGKV2-40A0A087WW87 121 aaPredicted RBP12.18□□□□□ -0.46
SYNE4-207ENST00000505054 LY6G6CO95867 125 aa12.18□□□□□ -0.46
SYNE4-207ENST00000505054 CXorf1O96002 111 aa12.18□□□□□ -0.46
SYNE4-207ENST00000505054 IGKV2D-40P01614 121 aaPredicted RBP12.18□□□□□ -0.46
SYNE4-207ENST00000505054 AMBPP02760 352 aa12.18□□□□□ -0.46
SYNE4-207ENST00000505054 EIF5AP63241 154 aaKnown RBP12.18□□□□□ -0.46
SYNE4-207ENST00000505054 ERCC8Q13216 396 aa12.18□□□□□ -0.46
SYNE4-207ENST00000505054 ZFP69Q49AA0 526 aa12.18□□□□□ -0.46
SYNE4-207ENST00000505054 C1orf158Q8N1D5 194 aa12.18□□□□□ -0.46
SYNE4-207ENST00000505054 Q8NAQ8 132 aa12.18□□□□□ -0.46
SYNE4-207ENST00000505054 IGF2BP2-AS1Q96M15 143 aa12.18□□□□□ -0.46
SYNE4-207ENST00000505054 OTORQ9NRC9 128 aa12.18□□□□□ -0.46
SYNE4-207ENST00000505054 NUPR2A6NF83 97 aa12.17□□□□□ -0.46
SYNE4-207ENST00000505054 CT45A10P0DMU9 189 aa12.17□□□□□ -0.46
SYNE4-207ENST00000505054 TPT1P13693 172 aaKnown RBP12.17□□□□□ -0.46
SYNE4-207ENST00000505054 FHITP49789 147 aa12.17□□□□□ -0.46
SYNE4-207ENST00000505054 TMED6Q8WW62 240 aa12.17□□□□□ -0.46
SYNE4-207ENST00000505054 C11orf68Q9H3H3 251 aaKnown RBP12.17□□□□□ -0.46
SYNE4-207ENST00000505054 TRAV12-2A0A075B6T6 113 aa12.16□□□□□ -0.46
SYNE4-207ENST00000505054 IGHV4-28A0A0C4DH34 117 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms