RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ZC2HC1BQ5TFG8 222 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 ZNF474Q6S9Z5 364 aaPredicted RBP6.04□□□□□ -1.44
NEDD9-208ENST00000504387 BOD1L2Q8IYS8 172 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 ZNF418Q8TF45 676 aaPredicted RBP6.04□□□□□ -1.44
NEDD9-208ENST00000504387 CACNG8Q8WXS5 425 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 C20orf78Q9BR46 151 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 SPRY4Q9C004 299 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 FBXL15Q9H469 300 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 PSG8Q9UQ74 426 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 A0A1B0GWB2 263 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 K7EQM0 130 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 CNIH1O95406 144 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 MRPL51Q4U2R6 128 aaKnown RBP6.04□□□□□ -1.44
NEDD9-208ENST00000504387 CCDC144NLQ6NUI1 221 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 LYPD2Q6UXB3 125 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 TNFRSF14Q92956 283 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 GAFA1Q96PS6 74 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 SPAG8Q99932 426 aaPredicted RBP6.04□□□□□ -1.44
NEDD9-208ENST00000504387 CHAC1Q9BUX1 264 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 SLC25A39Q9BZJ4 359 aaPredicted RBP6.04□□□□□ -1.44
NEDD9-208ENST00000504387 TRAV26-2A0A0B4J265 109 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 TRAV40A0A0B4J280 105 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 IGHV3-66A0A0C4DH42 116 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 GP9P14770 177 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 MYCNOSP40205 109 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 SLC25A48Q6ZT89 311 aaKnown RBP6.04□□□□□ -1.44
NEDD9-208ENST00000504387 OR4C13Q8NGP0 309 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 PTH2Q96A98 100 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 CUL9Q8IWT3 2517 aa6.04□□□□□ -1.44
NEDD9-208ENST00000504387 TMEM189A5PLL7 270 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 C16orf97H3BN30 126 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 K7EM74 188 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 HAX1O00165 279 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 HBDP02042 147 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 IL4P05112 153 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 CGB3P0DN86 165 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 CGB7P0DN87 165 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 RPS20P60866 119 aaKnown RBP6.03□□□□□ -1.44
NEDD9-208ENST00000504387 ORMDL3Q8N138 153 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 RASL11BQ9BPW5 248 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 IGHV3-49A0A0A0MS15 119 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 LOC107984156A0A0G2JMH3 177 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 IGHV1-46P01743 117 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 ARL17AQ8IVW1 177 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 MAPKAPK5-AS1Q8N8E1 139 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 GLMPQ8WWB7 406 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 ZNF479Q96JC4 524 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 HIST1H4GQ99525 98 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 VGLL1Q99990 258 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 MUC6Q6W4X9 2439 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 IGLV2-11P01706 119 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 RPL27AP46776 148 aaKnown RBP6.03□□□□□ -1.44
NEDD9-208ENST00000504387 HES1Q14469 280 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 TMEM200BQ69YZ2 307 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 SLC25A15Q9Y619 301 aa6.03□□□□□ -1.44
NEDD9-208ENST00000504387 NOTCH3Q9UM47 2321 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 TRBV25-1A0A075B6N4 114 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 A0A1B0GV72 72 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 TMEM8BA6NDV4 472 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 PRRG2O14669 202 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 APOBEC3AP31941 199 aaPredicted RBP6.02□□□□□ -1.45
NEDD9-208ENST00000504387 CRYBA4P53673 196 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 OR5A1Q8NGJ0 315 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 OSR1Q8TAX0 266 aaPredicted RBP6.02□□□□□ -1.45
NEDD9-208ENST00000504387 ATP6V0BQ99437 205 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 NCOR1P1Q9H4R4 102 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 CYSLTR1Q9Y271 337 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 UFC1Q9Y3C8 167 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 KLF12Q9Y4X4 402 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 ANKHD1Q8IWZ3 2542 aaKnown RBP6.02□□□□□ -1.45
NEDD9-208ENST00000504387 C19orf67A6NJJ6 358 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 LINC01548A6NM66 108 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 H3BVH4 76 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 NDUFB3O43676 98 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 GATA3P23771 443 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 EFNA4P52798 201 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 VMA21Q3ZAQ7 101 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 CD300EQ496F6 205 aaPredicted RBP6.02□□□□□ -1.45
NEDD9-208ENST00000504387 STXBP6Q8NFX7 210 aa6.02□□□□□ -1.45
NEDD9-208ENST00000504387 COL25A1Q9BXS0 654 aaPredicted RBP6.02□□□□□ -1.45
NEDD9-208ENST00000504387 NCOR2Q9Y618 2525 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 CREBBPQ92793 2442 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 GLRXP35754 106 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 EMP1P54849 157 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 SCGB2A2Q13296 93 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 C8orf46Q8TAG6 207 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 TMEM158Q8WZ71 300 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 SH2D1AO60880 128 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 LY6HO94772 140 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 OR4X2Q8NGF9 303 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 PLSCR4Q9NRQ2 329 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 DKK4Q9UBT3 224 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 CELSR1Q9NYQ6 3014 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.01□□□□□ -1.454e-7■■■□□ 16.4
NEDD9-208ENST00000504387 CD40P25942 277 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 ERCC8Q13216 396 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 POU2AF1Q16633 256 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 FAM104BQ5XKR9 115 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 Q6ZQT7 251 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 OR9G4Q8NGQ1 327 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms