RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 PMVKQ15126 192 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 TCTEX1D4Q5JR98 221 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 Q6ZRM9 215 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 PROK2Q9HC23 129 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 KIAA1671Q9BY89 1806 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 TRAV12-2A0A075B6T6 113 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 A0A087X0K7 114 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 H3BRN7 92 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 PRSS33Q8NF86 280 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 ANAPC10Q9UM13 185 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 FHL1Q13642 323 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 LINC00479Q96M42 142 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 IGKV1-6A0A0C4DH72 117 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 LOXP28300 417 aaPredicted RBP5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 GAGE6Q13070 117 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 WDR86Q86TI4 376 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 ASCC3Q8N3C0 2202 aaKnown RBP5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 TMEM256Q8N2U0 113 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 DNAJC30Q96LL9 226 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 C3orf79P0CE67 100 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 LMO1P25800 156 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 RPL32P62910 135 aaKnown RBP5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 RMI2Q96E14 147 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 CHAC1Q9BUX1 264 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 REG4Q9BYZ8 158 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 ZMAT4Q9H898 229 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 IGHV3-38A0A0C4DH36 116 aa5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 GAGE2AQ6NT46 116 aa5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 TANC1Q9C0D5 1861 aa5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 TRBV19A0A075B6N1 114 aa5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 ZNF503-AS2A6NEH8 195 aa5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 DLX4Q92988 240 aaPredicted RBP5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 ZNF48Q96MX3 618 aaPredicted RBP5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 WDR81Q562E7 1941 aa5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 C1orf194Q5T5A4 169 aa5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 ZNF114Q8NC26 417 aa5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 TRAV26-2A0A0B4J265 109 aa5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 ANXA2RQ3ZCQ2 193 aa5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 Q8N8P6 123 aa5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 TMEM243Q9BU79 118 aa5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 VWC2Q2TAL6 325 aa5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 ZNRF2Q8NHG8 242 aa5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 SNHG12Q9BXW3 62 aa5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 NCOR1P1Q9H4R4 102 aa5.74□□□□□ -1.49
SYNPO2-205ENST00000504178 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.73□□□□□ -1.49
SYNPO2-205ENST00000504178 HOXD3P31249 432 aaPredicted RBP5.73□□□□□ -1.49
SYNPO2-205ENST00000504178 CDKN1BP46527 198 aa5.73□□□□□ -1.49
SYNPO2-205ENST00000504178 TPSG1Q9NRR2 321 aa5.73□□□□□ -1.49
SYNPO2-205ENST00000504178 LINC00311Q8N616 119 aa5.73□□□□□ -1.49
SYNPO2-205ENST00000504178 A0A096LPF7 62 aa5.73□□□□□ -1.49
SYNPO2-205ENST00000504178 NBL1P41271 181 aa5.73□□□□□ -1.49
SYNPO2-205ENST00000504178 ZNF134P52741 427 aa5.73□□□□□ -1.49
SYNPO2-205ENST00000504178 KIR3DS1Q14943 382 aa5.73□□□□□ -1.49
SYNPO2-205ENST00000504178 ZFAND6Q6FIF0 208 aa5.73□□□□□ -1.49
SYNPO2-205ENST00000504178 HEATR5BQ9P2D3 2071 aa5.73□□□□□ -1.49
SYNPO2-205ENST00000504178 IGHV7-4-1A0A0J9YVY3 117 aa5.73□□□□□ -1.49
SYNPO2-205ENST00000504178 TSSC4Q9Y5U2 329 aaPredicted RBP5.73□□□□□ -1.49
SYNPO2-205ENST00000504178 IGLV1-44P01699 117 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 PFN2P35080 140 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 RBMY1FQ15415 496 aaKnown RBP5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 ZC2HC1BQ5TFG8 222 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 MRAPQ8TCY5 172 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 IGF2BP2-AS1Q96M15 143 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 TMEM126AQ9H061 195 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 NEGR1Q7Z3B1 354 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 TMEM14CQ9P0S9 112 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 ETV2O00321 342 aaPredicted RBP5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 DIAPH2-AS1Q14236 149 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 LURAP1LQ8IV03 231 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 CITED2Q99967 270 aaPredicted RBP5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 FAM215AQ9Y5M1 114 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 ABCA7Q8IZY2 2146 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 OCIAD2Q56VL3 154 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 RALGAPA1Q6GYQ0 2036 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 IGLV3-9A0A075B6K5 115 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 C15orf65H3BRN8 121 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 CGB7P0DN87 165 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 FAM104BQ5XKR9 115 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 PIP4P1Q86T03 277 aa5.72□□□□□ -1.49
SYNPO2-205ENST00000504178 IGHV2-5P01817 119 aa5.71□□□□□ -1.49
SYNPO2-205ENST00000504178 PLXNA4Q9HCM2 1894 aa5.71□□□□□ -1.49
SYNPO2-205ENST00000504178 PTPRZ1P23471 2315 aaPredicted RBP5.71□□□□□ -1.5
SYNPO2-205ENST00000504178 H3BUA1 57 aa5.71□□□□□ -1.5
SYNPO2-205ENST00000504178 ELANEP08246 267 aa5.71□□□□□ -1.5
SYNPO2-205ENST00000504178 CFPP27918 469 aa5.71□□□□□ -1.5
SYNPO2-205ENST00000504178 MRPL51Q4U2R6 128 aaKnown RBP5.71□□□□□ -1.5
SYNPO2-205ENST00000504178 C2orf66Q6UXQ4 117 aa5.71□□□□□ -1.5
SYNPO2-205ENST00000504178 PLXNA2O75051 1894 aa5.71□□□□□ -1.5
SYNPO2-205ENST00000504178 SHISA9B4DS77 424 aa5.71□□□□□ -1.5
SYNPO2-205ENST00000504178 GAGE2BQ13066 116 aa5.71□□□□□ -1.5
SYNPO2-205ENST00000504178 DEFB112Q30KQ8 113 aa5.71□□□□□ -1.5
SYNPO2-205ENST00000504178 HLA-DRB4P13762 266 aa5.71□□□□□ -1.5
SYNPO2-205ENST00000504178 TCF15Q12870 199 aa5.71□□□□□ -1.5
SYNPO2-205ENST00000504178 HLA-DRB4X5D2U9 266 aa5.71□□□□□ -1.5
SYNPO2-205ENST00000504178 WISP1O95388 367 aa5.71□□□□□ -1.5
SYNPO2-205ENST00000504178 CLPSL2Q6UWE3 100 aa5.71□□□□□ -1.5
SYNPO2-205ENST00000504178 STPG4Q8N801 248 aa5.71□□□□□ -1.5
SYNPO2-205ENST00000504178 C22orf46C9J442 243 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 CT83Q5H943 113 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 CYYR1Q96J86 154 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms