RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 LINC01559Q495D7 138 aa14.09□□□□□ -0.15
POLR2J3-209ENST00000504157 GTSCR1Q86UQ5 136 aa14.09□□□□□ -0.15
POLR2J3-209ENST00000504157 TPPP3Q9BW30 176 aa14.09□□□□□ -0.15
POLR2J3-209ENST00000504157 VCX2Q9H322 139 aa14.09□□□□□ -0.15
POLR2J3-209ENST00000504157 ZNRD1Q9P1U0 126 aa14.09□□□□□ -0.15
POLR2J3-209ENST00000504157 RIF1Q5UIP0 2472 aaKnown RBP14.09□□□□□ -0.15
POLR2J3-209ENST00000504157 IGLV2-23P01705 113 aa14.09□□□□□ -0.15
POLR2J3-209ENST00000504157 FAM201AQ5SY85 155 aa14.09□□□□□ -0.15
POLR2J3-209ENST00000504157 TMEM75Q8N9X5 138 aa14.09□□□□□ -0.15
POLR2J3-209ENST00000504157 TMEM158Q8WZ71 300 aa14.09□□□□□ -0.15
POLR2J3-209ENST00000504157 RALYQ9UKM9 306 aaKnown RBP14.09□□□□□ -0.15
POLR2J3-209ENST00000504157 TMEM213A2RRL7 107 aa14.08□□□□□ -0.16
POLR2J3-209ENST00000504157 PCNX2A6NKB5 2137 aa14.08□□□□□ -0.16
POLR2J3-209ENST00000504157 NPYP01303 97 aa14.08□□□□□ -0.16
POLR2J3-209ENST00000504157 CD59P13987 128 aa14.08□□□□□ -0.16
POLR2J3-209ENST00000504157 C10orf55Q5SWW7 151 aa14.08□□□□□ -0.16
POLR2J3-209ENST00000504157 ZC2HC1BQ5TFG8 222 aa14.08□□□□□ -0.16
POLR2J3-209ENST00000504157 FAM186AA6NE01 2351 aa14.07□□□□□ -0.16
POLR2J3-209ENST00000504157 A0A1W2PPI3 338 aa14.07□□□□□ -0.16
POLR2J3-209ENST00000504157 DPM2O94777 84 aa14.07□□□□□ -0.16
POLR2J3-209ENST00000504157 MAPKAPK5-AS1Q8N8E1 139 aa14.07□□□□□ -0.16
POLR2J3-209ENST00000504157 FREM2Q5SZK8 3169 aa14.07□□□□□ -0.16
POLR2J3-209ENST00000504157 B5MCH6 92 aa14.07□□□□□ -0.16
POLR2J3-209ENST00000504157 CRIP1P50238 77 aa14.07□□□□□ -0.16
POLR2J3-209ENST00000504157 LYZL1Q6UWQ5 148 aa14.07□□□□□ -0.16
POLR2J3-209ENST00000504157 GLMPQ8WWB7 406 aa14.07□□□□□ -0.16
POLR2J3-209ENST00000504157 ZNF71Q9NQZ8 489 aaPredicted RBP14.07□□□□□ -0.16
POLR2J3-209ENST00000504157 SLC25A15Q9Y619 301 aa14.07□□□□□ -0.16
POLR2J3-209ENST00000504157 TRBV7-3A0A075B6L6 115 aa14.06□□□□□ -0.16
POLR2J3-209ENST00000504157 LINC01619G3V211 115 aa14.06□□□□□ -0.16
POLR2J3-209ENST00000504157 FCER1GP30273 86 aa14.06□□□□□ -0.16
POLR2J3-209ENST00000504157 MORN3Q6PF18 240 aaPredicted RBP14.06□□□□□ -0.16
POLR2J3-209ENST00000504157 HIST1H4GQ99525 98 aa14.06□□□□□ -0.16
POLR2J3-209ENST00000504157 HIGD1AQ9Y241 93 aa14.06□□□□□ -0.16
POLR2J3-209ENST00000504157 UFC1Q9Y3C8 167 aa14.06□□□□□ -0.16
POLR2J3-209ENST00000504157 DMXL1Q9Y485 3027 aa14.06□□□□□ -0.16
POLR2J3-209ENST00000504157 IGLV3-9A0A075B6K5 115 aa14.06□□□□□ -0.16
POLR2J3-209ENST00000504157 SPRY3O43610 288 aa14.06□□□□□ -0.16
POLR2J3-209ENST00000504157 PRSS1P07477 247 aa14.06□□□□□ -0.16
POLR2J3-209ENST00000504157 CKS2P33552 79 aa14.06□□□□□ -0.16
POLR2J3-209ENST00000504157 ASCL5Q7RTU5 278 aa14.06□□□□□ -0.16
POLR2J3-209ENST00000504157 C9orf106Q8NAJ2 232 aa14.06□□□□□ -0.16
POLR2J3-209ENST00000504157 PPDPFLQ8WWR9 84 aa14.06□□□□□ -0.16
POLR2J3-209ENST00000504157 DLX4Q92988 240 aaPredicted RBP14.06□□□□□ -0.16
POLR2J3-209ENST00000504157 AGRNO00468 2067 aa14.05□□□□□ -0.16
POLR2J3-209ENST00000504157 FRYQ5TBA9 3013 aa14.05□□□□□ -0.16
POLR2J3-209ENST00000504157 PRSS29PA6NIE9 313 aa14.05□□□□□ -0.16
POLR2J3-209ENST00000504157 GLRXP35754 106 aa14.05□□□□□ -0.16
POLR2J3-209ENST00000504157 HERV-K104P63124 156 aa14.05□□□□□ -0.16
POLR2J3-209ENST00000504157 RUSC1-AS1Q66K80 236 aa14.05□□□□□ -0.16
POLR2J3-209ENST00000504157 ZFAND6Q6FIF0 208 aa14.05□□□□□ -0.16
POLR2J3-209ENST00000504157 EXOC3-AS1Q8N2X6 119 aa14.05□□□□□ -0.16
POLR2J3-209ENST00000504157 FAM216BQ8N7L0 139 aa14.05□□□□□ -0.16
POLR2J3-209ENST00000504157 C8orf31Q8N9H6 132 aa14.05□□□□□ -0.16
POLR2J3-209ENST00000504157 CCL13Q99616 98 aa14.05□□□□□ -0.16
POLR2J3-209ENST00000504157 ATP5LO75964 103 aa14.05□□□□□ -0.16
POLR2J3-209ENST00000504157 TWIST1Q15672 202 aa14.05□□□□□ -0.16
POLR2J3-209ENST00000504157 VMA21Q3ZAQ7 101 aa14.05□□□□□ -0.16
POLR2J3-209ENST00000504157 TEX36Q5VZQ5 186 aa14.05□□□□□ -0.16
POLR2J3-209ENST00000504157 TMEM133Q9H2Q1 129 aa14.05□□□□□ -0.16
POLR2J3-209ENST00000504157 DSCAMO60469 2012 aa14.04□□□□□ -0.16
POLR2J3-209ENST00000504157 RBP4P02753 201 aa14.04□□□□□ -0.16
POLR2J3-209ENST00000504157 MRGPRG-AS1Q2M3A8 158 aa14.04□□□□□ -0.16
POLR2J3-209ENST00000504157 CARD19Q96LW7 228 aa14.04□□□□□ -0.16
POLR2J3-209ENST00000504157 SLC25A39Q9BZJ4 359 aaPredicted RBP14.04□□□□□ -0.16
POLR2J3-209ENST00000504157 ZNF292O60281 2723 aa14.04□□□□□ -0.16
POLR2J3-209ENST00000504157 TMEM8BA6NDV4 472 aa14.03□□□□□ -0.16
POLR2J3-209ENST00000504157 NHLRC4P0CG21 123 aaPredicted RBP14.03□□□□□ -0.16
POLR2J3-209ENST00000504157 LEPP41159 167 aa14.03□□□□□ -0.16
POLR2J3-209ENST00000504157 LINC00311Q8N616 119 aa14.03□□□□□ -0.16
POLR2J3-209ENST00000504157 SMKR1H3BMG3 65 aa14.03□□□□□ -0.16
POLR2J3-209ENST00000504157 CCL11P51671 97 aa14.03□□□□□ -0.16
POLR2J3-209ENST00000504157 C3orf36Q3SXR2 165 aa14.03□□□□□ -0.16
POLR2J3-209ENST00000504157 LYPD1Q8N2G4 141 aa14.03□□□□□ -0.16
POLR2J3-209ENST00000504157 TEX29Q8N6K0 151 aa14.03□□□□□ -0.16
POLR2J3-209ENST00000504157 FOXC2Q99958 501 aa14.02□□□□□ -0.16
POLR2J3-209ENST00000504157 MAP1LC3AQ9H492 121 aa14.02□□□□□ -0.16
POLR2J3-209ENST00000504157 A0A1W2PNU3 283 aaPredicted RBP14.02□□□□□ -0.17
POLR2J3-209ENST00000504157 HOXA3O43365 443 aaPredicted RBP14.02□□□□□ -0.17
POLR2J3-209ENST00000504157 TEN1Q86WV5 123 aa14.02□□□□□ -0.17
POLR2J3-209ENST00000504157 CITED1Q99966 193 aa14.02□□□□□ -0.17
POLR2J3-209ENST00000504157 TNFRSF1AP19438 455 aa14.01□□□□□ -0.17
POLR2J3-209ENST00000504157 PTPRZ1P23471 2315 aaPredicted RBP14.01□□□□□ -0.17
POLR2J3-209ENST00000504157 SRD5A1P18405 259 aa14□□□□□ -0.17
POLR2J3-209ENST00000504157 DEFB108BQ8NET1 73 aa14□□□□□ -0.17
POLR2J3-209ENST00000504157 NAV3Q8IVL0 2385 aa14□□□□□ -0.17
POLR2J3-209ENST00000504157 TRBV19A0A075B6N1 114 aa14□□□□□ -0.17
POLR2J3-209ENST00000504157 IL4P05112 153 aa14□□□□□ -0.17
POLR2J3-209ENST00000504157 TNFAIP6P98066 277 aaPredicted RBP14□□□□□ -0.17
POLR2J3-209ENST00000504157 ASCL2Q99929 193 aa14□□□□□ -0.17
POLR2J3-209ENST00000504157 NXT2Q9NPJ8 142 aaKnown RBP14□□□□□ -0.17
POLR2J3-209ENST00000504157 TMEM160Q9NX00 188 aa14□□□□□ -0.17
POLR2J3-209ENST00000504157 PROCRQ9UNN8 238 aa14□□□□□ -0.17
POLR2J3-209ENST00000504157 GVINP1Q7Z2Y8 2422 aa14□□□□□ -0.17
POLR2J3-209ENST00000504157 PRR14LQ5THK1 2151 aa13.99□□□□□ -0.17
POLR2J3-209ENST00000504157 TRAV40A0A0B4J280 105 aa13.99□□□□□ -0.17
POLR2J3-209ENST00000504157 FAM90A27PA6NNH2 459 aa13.99□□□□□ -0.17
POLR2J3-209ENST00000504157 RPL32P62910 135 aaKnown RBP13.99□□□□□ -0.17
POLR2J3-209ENST00000504157 HCP5Q6MZN7 132 aa13.99□□□□□ -0.17
POLR2J3-209ENST00000504157 TMEM262E9PQX1 116 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms