RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 BIN3Q9NQY0 253 aa11.54□□□□□ -0.56
SCLT1-204ENST00000503215 MBD2Q9UBB5 411 aa11.54□□□□□ -0.56
SCLT1-204ENST00000503215 A0A087X0K7 114 aa11.53□□□□□ -0.56
SCLT1-204ENST00000503215 M0R2N4 97 aa11.53□□□□□ -0.56
SCLT1-204ENST00000503215 DUSP14O95147 198 aaKnown RBP11.53□□□□□ -0.56
SCLT1-204ENST00000503215 AZU1P20160 251 aa11.53□□□□□ -0.56
SCLT1-204ENST00000503215 DMRTA1Q5VZB9 504 aa11.53□□□□□ -0.56
SCLT1-204ENST00000503215 TMEM208Q9BTX3 173 aa11.53□□□□□ -0.56
SCLT1-204ENST00000503215 NKX6-2Q9C056 277 aaPredicted RBP11.53□□□□□ -0.56
SCLT1-204ENST00000503215 C11orf1Q9H5F2 150 aa11.53□□□□□ -0.56
SCLT1-204ENST00000503215 LSM5Q9Y4Y9 91 aaKnown RBP11.53□□□□□ -0.56
SCLT1-204ENST00000503215 H3BTX0 84 aa11.52□□□□□ -0.57
SCLT1-204ENST00000503215 GOSR2O14653 212 aa11.52□□□□□ -0.57
SCLT1-204ENST00000503215 S100A7P31151 101 aa11.52□□□□□ -0.57
SCLT1-204ENST00000503215 HIST1H1AQ02539 215 aaPredicted RBP11.52□□□□□ -0.57
SCLT1-204ENST00000503215 PSG3Q16557 428 aa11.52□□□□□ -0.57
SCLT1-204ENST00000503215 SVBPQ8N300 66 aa11.52□□□□□ -0.57
SCLT1-204ENST00000503215 OR8A1Q8NGG7 326 aa11.52□□□□□ -0.57
SCLT1-204ENST00000503215 TMEM37Q8WXS4 190 aa11.52□□□□□ -0.57
SCLT1-204ENST00000503215 FAM24AA6NFZ4 105 aa11.51□□□□□ -0.57
SCLT1-204ENST00000503215 CST7O76096 145 aa11.51□□□□□ -0.57
SCLT1-204ENST00000503215 P0DMU3 169 aa11.51□□□□□ -0.57
SCLT1-204ENST00000503215 FAM231AP0DMU4 169 aa11.51□□□□□ -0.57
SCLT1-204ENST00000503215 FAM231CP0DMU5 169 aa11.51□□□□□ -0.57
SCLT1-204ENST00000503215 LINC00305Q7Z4B0 112 aa11.51□□□□□ -0.57
SCLT1-204ENST00000503215 HECTD4Q9Y4D8 3996 aa11.51□□□□□ -0.57
SCLT1-204ENST00000503215 PLAC8L1A1L4L8 177 aa11.5□□□□□ -0.57
SCLT1-204ENST00000503215 C5orf51A6NDU8 294 aa11.5□□□□□ -0.57
SCLT1-204ENST00000503215 INSP01308 110 aa11.5□□□□□ -0.57
SCLT1-204ENST00000503215 APOC3P02656 99 aa11.5□□□□□ -0.57
SCLT1-204ENST00000503215 RHOBP62745 196 aa11.5□□□□□ -0.57
SCLT1-204ENST00000503215 VAMP2P63027 116 aa11.5□□□□□ -0.57
SCLT1-204ENST00000503215 KIR3DS1Q14943 382 aa11.5□□□□□ -0.57
SCLT1-204ENST00000503215 C10orf91Q5T1B1 145 aa11.5□□□□□ -0.57
SCLT1-204ENST00000503215 ALKAL2Q6UX46 152 aa11.5□□□□□ -0.57
SCLT1-204ENST00000503215 ZNF546Q86UE3 836 aa11.5□□□□□ -0.57
SCLT1-204ENST00000503215 KCNRGQ8N5I3 272 aa11.5□□□□□ -0.57
SCLT1-204ENST00000503215 GGACTQ9BVM4 153 aa11.5□□□□□ -0.57
SCLT1-204ENST00000503215 TRAV5A0A0B4J249 113 aa11.49□□□□□ -0.57
SCLT1-204ENST00000503215 PRAC2D3DTV9 90 aa11.49□□□□□ -0.57
SCLT1-204ENST00000503215 F8W036 122 aa11.49□□□□□ -0.57
SCLT1-204ENST00000503215 SLC17A3O00476 420 aa11.49□□□□□ -0.57
SCLT1-204ENST00000503215 ARPC5O15511 151 aa11.49□□□□□ -0.57
SCLT1-204ENST00000503215 SNAPINO95295 136 aa11.49□□□□□ -0.57
SCLT1-204ENST00000503215 DAD1P61803 113 aa11.49□□□□□ -0.57
SCLT1-204ENST00000503215 MIC13Q5XKP0 118 aa11.49□□□□□ -0.57
SCLT1-204ENST00000503215 TMEM88Q6PEY1 159 aa11.49□□□□□ -0.57
SCLT1-204ENST00000503215 C12orf45Q8N5I9 185 aaPredicted RBP11.49□□□□□ -0.57
SCLT1-204ENST00000503215 RPUSD4Q96CM3 377 aaKnown RBP11.49□□□□□ -0.57
SCLT1-204ENST00000503215 PARD6GQ9BYG4 376 aaPredicted RBP11.49□□□□□ -0.57
SCLT1-204ENST00000503215 ZNF331Q9NQX6 463 aaPredicted RBP11.49□□□□□ -0.57
SCLT1-204ENST00000503215 FAT2Q9NYQ8 4349 aa11.48□□□□□ -0.57
SCLT1-204ENST00000503215 DNAH2Q9P225 4427 aa11.48□□□□□ -0.57
SCLT1-204ENST00000503215 IGLV2-18A0A075B6J9 118 aa11.48□□□□□ -0.57
SCLT1-204ENST00000503215 TEX48A0A1B0GUV7 120 aa11.48□□□□□ -0.57
SCLT1-204ENST00000503215 H3BQ15 152 aa11.48□□□□□ -0.57
SCLT1-204ENST00000503215 COX7A2P2O60397 106 aa11.48□□□□□ -0.57
SCLT1-204ENST00000503215 S100A8P05109 93 aa11.48□□□□□ -0.57
SCLT1-204ENST00000503215 CAV2P51636 162 aa11.48□□□□□ -0.57
SCLT1-204ENST00000503215 IL15RAQ13261 267 aa11.48□□□□□ -0.57
SCLT1-204ENST00000503215 C2orf50Q96LR7 162 aa11.48□□□□□ -0.57
SCLT1-204ENST00000503215 CARHSP1Q9Y2V2 147 aaKnown RBP11.48□□□□□ -0.57
SCLT1-204ENST00000503215 KANTRA0A1W2PQU2 76 aa11.47□□□□□ -0.57
SCLT1-204ENST00000503215 IGSF23A1L1A6 192 aa11.47□□□□□ -0.57
SCLT1-204ENST00000503215 RTL8CO15255 209 aa11.47□□□□□ -0.57
SCLT1-204ENST00000503215 DEFB130BP0DP73 79 aa11.47□□□□□ -0.57
SCLT1-204ENST00000503215 DEFB130AP0DP74 79 aa11.47□□□□□ -0.57
SCLT1-204ENST00000503215 CAMLGP49069 296 aa11.47□□□□□ -0.57
SCLT1-204ENST00000503215 PCNPQ8WW12 178 aaKnown RBP11.47□□□□□ -0.57
SCLT1-204ENST00000503215 FAM210BQ96KR6 192 aa11.47□□□□□ -0.57
SCLT1-204ENST00000503215 LINC01587Q99440 93 aa11.47□□□□□ -0.57
SCLT1-204ENST00000503215 KRTAP17-1Q9BYP8 105 aa11.47□□□□□ -0.57
SCLT1-204ENST00000503215 HERC2O95714 4834 aa11.46□□□□□ -0.57
SCLT1-204ENST00000503215 FXYD6-FXYD2A0A087WZ82 144 aa11.46□□□□□ -0.57
SCLT1-204ENST00000503215 BCL2L11O43521 198 aa11.46□□□□□ -0.57
SCLT1-204ENST00000503215 IGLC2P0DOY2 106 aa11.46□□□□□ -0.57
SCLT1-204ENST00000503215 HTN1P15515 57 aa11.46□□□□□ -0.57
SCLT1-204ENST00000503215 S100A10P60903 97 aa11.46□□□□□ -0.57
SCLT1-204ENST00000503215 C10orf113Q5VZT2 155 aa11.46□□□□□ -0.57
SCLT1-204ENST00000503215 TCEAL7Q9BRU2 100 aa11.46□□□□□ -0.57
SCLT1-204ENST00000503215 DNAJC4Q9NNZ3 241 aa11.46□□□□□ -0.57
SCLT1-204ENST00000503215 PPP1R14DQ9NXH3 145 aa11.46□□□□□ -0.57
SCLT1-204ENST00000503215 WDR83OSQ9Y284 106 aa11.46□□□□□ -0.57
SCLT1-204ENST00000503215 DNAH17Q9UFH2 4485 aa11.46□□□□□ -0.57
SCLT1-204ENST00000503215 A0A1B0GVY2 172 aa11.45□□□□□ -0.58
SCLT1-204ENST00000503215 TMEM218A2RU14 115 aa11.45□□□□□ -0.58
SCLT1-204ENST00000503215 RNF222A6NCQ9 220 aa11.45□□□□□ -0.58
SCLT1-204ENST00000503215 H2BFSP57053 126 aa11.45□□□□□ -0.58
SCLT1-204ENST00000503215 RAB32Q13637 225 aa11.45□□□□□ -0.58
SCLT1-204ENST00000503215 LCN15Q6UWW0 184 aa11.45□□□□□ -0.58
SCLT1-204ENST00000503215 S100A7AQ86SG5 101 aa11.45□□□□□ -0.58
SCLT1-204ENST00000503215 BPIFA4PQ86YQ2 179 aa11.45□□□□□ -0.58
SCLT1-204ENST00000503215 SAT2Q96F10 170 aaPredicted RBP11.45□□□□□ -0.58
SCLT1-204ENST00000503215 C12orf57Q99622 126 aa11.45□□□□□ -0.58
SCLT1-204ENST00000503215 UQCC1Q9NVA1 299 aa11.45□□□□□ -0.58
SCLT1-204ENST00000503215 SMIM6P0DI80 62 aa11.44□□□□□ -0.58
SCLT1-204ENST00000503215 TSPOP30536 169 aa11.44□□□□□ -0.58
SCLT1-204ENST00000503215 VWC2Q2TAL6 325 aa11.44□□□□□ -0.58
SCLT1-204ENST00000503215 UBE2DNLQ8IWF7 75 aa11.44□□□□□ -0.58
SCLT1-204ENST00000503215 TMEM252Q8N6L7 170 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms