RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 MED6O75586 246 aa6.14□□□□□ -1.43
CCDC171-209ENST00000498725 CT45A10P0DMU9 189 aa6.14□□□□□ -1.43
CCDC171-209ENST00000498725 LEPP41159 167 aa6.14□□□□□ -1.43
CCDC171-209ENST00000498725 RPP30P78346 268 aaKnown RBP6.14□□□□□ -1.43
CCDC171-209ENST00000498725 ZNF415Q09FC8 603 aa6.14□□□□□ -1.43
CCDC171-209ENST00000498725 DEFB104AQ8WTQ1 72 aa6.14□□□□□ -1.43
CCDC171-209ENST00000498725 PRRT1Q99946 306 aa6.14□□□□□ -1.43
CCDC171-209ENST00000498725 PYGO2Q9BRQ0 406 aa6.14□□□□□ -1.43
CCDC171-209ENST00000498725 VCX3AQ9NNX9 186 aa6.14□□□□□ -1.43
CCDC171-209ENST00000498725 ZNF331Q9NQX6 463 aaPredicted RBP6.14□□□□□ -1.43
CCDC171-209ENST00000498725 MCUBQ9NWR8 336 aa6.14□□□□□ -1.43
CCDC171-209ENST00000498725 UBR4Q5T4S7 5183 aa6.14□□□□□ -1.43
CCDC171-209ENST00000498725 PITX3O75364 302 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 ATP6V1G2O95670 118 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 CRYGDP07320 174 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 H2AFB1P0C5Y9 115 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 H2AFB2P0C5Z0 115 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 ANXA3P12429 323 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 ERCC8Q13216 396 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 MRPL23Q16540 153 aaKnown RBP6.13□□□□□ -1.43
CCDC171-209ENST00000498725 LCN15Q6UWW0 184 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 PATE2Q6UY27 113 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 NEGR1Q7Z3B1 354 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 KRTAP19-1Q8IUB9 90 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 ZBTB8BQ8NAP8 495 aaPredicted RBP6.13□□□□□ -1.43
CCDC171-209ENST00000498725 C11orf72Q8NBR9 251 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 ZNF431Q8TF32 576 aaPredicted RBP6.13□□□□□ -1.43
CCDC171-209ENST00000498725 C15orf40Q8WUR7 153 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 SLC50A1Q9BRV3 221 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 ARV1Q9H2C2 271 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 MIXL1Q9H2W2 232 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 Q9HAA7 133 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 PRO0255Q9UI72 69 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 HHLA3Q9XRX5 114 aa6.13□□□□□ -1.43
CCDC171-209ENST00000498725 STRAPQ9Y3F4 350 aaKnown RBP6.13□□□□□ -1.43
CCDC171-209ENST00000498725 TRGV4A0A0C4DH28 118 aa6.12□□□□□ -1.43
CCDC171-209ENST00000498725 LRCOL1A6NCL2 159 aa6.12□□□□□ -1.43
CCDC171-209ENST00000498725 MRPS12O15235 138 aaKnown RBP6.12□□□□□ -1.43
CCDC171-209ENST00000498725 CCNKO75909 580 aa6.12□□□□□ -1.43
CCDC171-209ENST00000498725 HOXB5P09067 269 aa6.12□□□□□ -1.43
CCDC171-209ENST00000498725 VAMP1P23763 118 aa6.12□□□□□ -1.43
CCDC171-209ENST00000498725 RNASE4P34096 147 aaKnown RBP6.12□□□□□ -1.43
CCDC171-209ENST00000498725 CRYBA4P53673 196 aa6.12□□□□□ -1.43
CCDC171-209ENST00000498725 SRPXP78539 464 aa6.12□□□□□ -1.43
CCDC171-209ENST00000498725 SLC38A11Q08AI6 406 aa6.12□□□□□ -1.43
CCDC171-209ENST00000498725 BTN1A1Q13410 526 aa6.12□□□□□ -1.43
CCDC171-209ENST00000498725 IL18Q14116 193 aa6.12□□□□□ -1.43
CCDC171-209ENST00000498725 EIF4E3Q8N5X7 224 aaKnown RBP6.12□□□□□ -1.43
CCDC171-209ENST00000498725 ZNF680Q8NEM1 530 aa6.12□□□□□ -1.43
CCDC171-209ENST00000498725 AP3S1Q92572 193 aa6.12□□□□□ -1.43
CCDC171-209ENST00000498725 ST6GAL2Q96JF0 529 aa6.12□□□□□ -1.43
CCDC171-209ENST00000498725 CIB3Q96Q77 187 aaPredicted RBP6.12□□□□□ -1.43
CCDC171-209ENST00000498725 NAA50Q9GZZ1 169 aaKnown RBP6.12□□□□□ -1.43
CCDC171-209ENST00000498725 SCP2D1Q9UJQ7 156 aa6.12□□□□□ -1.43
CCDC171-209ENST00000498725 TP53TG3Q9ULZ0 132 aa6.12□□□□□ -1.43
CCDC171-209ENST00000498725 A0A087WXM4 84 aa6.11□□□□□ -1.43
CCDC171-209ENST00000498725 C7orf71A4D174 169 aa6.11□□□□□ -1.43
CCDC171-209ENST00000498725 SPINK4O60575 86 aa6.11□□□□□ -1.43
CCDC171-209ENST00000498725 SFTA3P0C7M3 94 aa6.11□□□□□ -1.43
CCDC171-209ENST00000498725 SRIP30626 198 aa6.11□□□□□ -1.43
CCDC171-209ENST00000498725 SSBP1Q04837 148 aaKnown RBP6.11□□□□□ -1.43
CCDC171-209ENST00000498725 CD300CQ08708 224 aa6.11□□□□□ -1.43
CCDC171-209ENST00000498725 FHL2Q14192 279 aa6.11□□□□□ -1.43
CCDC171-209ENST00000498725 MORN5Q5VZ52 161 aa6.11□□□□□ -1.43
CCDC171-209ENST00000498725 TEPPQ6URK8 271 aa6.11□□□□□ -1.43
CCDC171-209ENST00000498725 LINC00305Q7Z4B0 112 aa6.11□□□□□ -1.43
CCDC171-209ENST00000498725 S100A7AQ86SG5 101 aa6.11□□□□□ -1.43
CCDC171-209ENST00000498725 Q8N814 137 aa6.11□□□□□ -1.43
CCDC171-209ENST00000498725 NTN5Q8WTR8 489 aaPredicted RBP6.11□□□□□ -1.43
CCDC171-209ENST00000498725 SMIM4Q8WVI0 70 aa6.11□□□□□ -1.43
CCDC171-209ENST00000498725 SCGB3A2Q96PL1 93 aa6.11□□□□□ -1.43
CCDC171-209ENST00000498725 PSENENQ9NZ42 101 aa6.11□□□□□ -1.43
CCDC171-209ENST00000498725 RCL1Q9Y2P8 373 aaKnown RBP6.11□□□□□ -1.43
CCDC171-209ENST00000498725 ANKRD20A5PA0PJZ0 165 aa6.1□□□□□ -1.43
CCDC171-209ENST00000498725 H3BQ15 152 aa6.1□□□□□ -1.43
CCDC171-209ENST00000498725 K7EQD1 137 aa6.1□□□□□ -1.43
CCDC171-209ENST00000498725 CTDSP2O14595 271 aa6.1□□□□□ -1.43
CCDC171-209ENST00000498725 GOSR2O14653 212 aa6.1□□□□□ -1.43
CCDC171-209ENST00000498725 COX7A2P2O60397 106 aa6.1□□□□□ -1.43
CCDC171-209ENST00000498725 SLC25A5P05141 298 aaKnown RBP6.1□□□□□ -1.43
CCDC171-209ENST00000498725 GYPEP15421 78 aa6.1□□□□□ -1.43
CCDC171-209ENST00000498725 CXCL2P19875 107 aa6.1□□□□□ -1.43
CCDC171-209ENST00000498725 TCL1AP56279 114 aa6.1□□□□□ -1.43
CCDC171-209ENST00000498725 PLP1P60201 277 aa6.1□□□□□ -1.43
CCDC171-209ENST00000498725 SELENOTP62341 195 aa6.1□□□□□ -1.43
CCDC171-209ENST00000498725 MRPS10P82664 201 aaKnown RBP6.1□□□□□ -1.43
CCDC171-209ENST00000498725 LINC01620Q4KN68 170 aa6.1□□□□□ -1.43
CCDC171-209ENST00000498725 Q6ZQT7 251 aa6.1□□□□□ -1.43
CCDC171-209ENST00000498725 BPIFA4PQ86YQ2 179 aa6.1□□□□□ -1.43
CCDC171-209ENST00000498725 PCNPQ8WW12 178 aaKnown RBP6.1□□□□□ -1.43
CCDC171-209ENST00000498725 PXMP4Q9Y6I8 212 aa6.1□□□□□ -1.43
CCDC171-209ENST00000498725 TRAV5A0A0B4J249 113 aa6.09□□□□□ -1.43
CCDC171-209ENST00000498725 LOC100131303A0A0U1RQF7 123 aa6.09□□□□□ -1.43
CCDC171-209ENST00000498725 DUXBA0A1W2PPF3 345 aa6.09□□□□□ -1.43
CCDC171-209ENST00000498725 RGS13O14921 159 aa6.09□□□□□ -1.43
CCDC171-209ENST00000498725 LECT2O14960 151 aa6.09□□□□□ -1.43
CCDC171-209ENST00000498725 MPDU1O75352 247 aa6.09□□□□□ -1.43
CCDC171-209ENST00000498725 GPX1P07203 203 aa6.09□□□□□ -1.43
CCDC171-209ENST00000498725 METTL15P1P0C7V9 234 aa6.09□□□□□ -1.43
CCDC171-209ENST00000498725 POLR2GP62487 172 aaKnown RBP eCLIP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms