RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 C1orf194Q5T5A4 169 aa13.25□□□□□ -0.29
PRKCB-209ENST00000498058 C1QTNF4Q9BXJ3 329 aa13.25□□□□□ -0.29
PRKCB-209ENST00000498058 MRPL32Q9BYC8 188 aaKnown RBP13.25□□□□□ -0.29
PRKCB-209ENST00000498058 A0A1W2PPV4 95 aa13.24□□□□□ -0.29
PRKCB-209ENST00000498058 LINC00305Q7Z4B0 112 aa13.24□□□□□ -0.29
PRKCB-209ENST00000498058 PHYHIPLQ96FC7 376 aa13.24□□□□□ -0.29
PRKCB-209ENST00000498058 GPR82Q96P67 336 aa13.24□□□□□ -0.29
PRKCB-209ENST00000498058 SHANK2-AS3Q9BTD1 123 aa13.24□□□□□ -0.29
PRKCB-209ENST00000498058 SLC25A39Q9BZJ4 359 aaPredicted RBP13.24□□□□□ -0.29
PRKCB-209ENST00000498058 SAV1Q9H4B6 383 aaPredicted RBP13.24□□□□□ -0.29
PRKCB-209ENST00000498058 PLA2G2EQ9NZK7 142 aa13.24□□□□□ -0.29
PRKCB-209ENST00000498058 NUTF2P61970 127 aaKnown RBP13.23□□□□□ -0.29
PRKCB-209ENST00000498058 PATE2Q6UY27 113 aa13.23□□□□□ -0.29
PRKCB-209ENST00000498058 POM121L12Q8N7R1 296 aa13.23□□□□□ -0.29
PRKCB-209ENST00000498058 OR10G4Q8NGN3 311 aa13.23□□□□□ -0.29
PRKCB-209ENST00000498058 OR10G9Q8NGN4 311 aa13.23□□□□□ -0.29
PRKCB-209ENST00000498058 OR10G7Q8NGN6 311 aa13.23□□□□□ -0.29
PRKCB-209ENST00000498058 TMEM37Q8WXS4 190 aa13.23□□□□□ -0.29
PRKCB-209ENST00000498058 C17orf77Q96MU5 243 aa13.23□□□□□ -0.29
PRKCB-209ENST00000498058 LINC00052Q96N35 136 aa13.23□□□□□ -0.29
PRKCB-209ENST00000498058 NEU1Q99519 415 aa13.23□□□□□ -0.29
PRKCB-209ENST00000498058 BOLA1Q9Y3E2 137 aa13.23□□□□□ -0.29
PRKCB-209ENST00000498058 ZNF98A6NK75 572 aa13.22□□□□□ -0.29
PRKCB-209ENST00000498058 F6UB75 175 aa13.22□□□□□ -0.29
PRKCB-209ENST00000498058 H3BRN7 92 aa13.22□□□□□ -0.29
PRKCB-209ENST00000498058 RTL8CO15255 209 aa13.22□□□□□ -0.29
PRKCB-209ENST00000498058 RAB5CP51148 216 aa13.22□□□□□ -0.29
PRKCB-209ENST00000498058 EMP1P54849 157 aa13.22□□□□□ -0.29
PRKCB-209ENST00000498058 TAS2R45P59539 299 aa13.22□□□□□ -0.29
PRKCB-209ENST00000498058 GCSAMLQ5JQS6 135 aa13.22□□□□□ -0.29
PRKCB-209ENST00000498058 FAM78BQ5VT40 261 aa13.22□□□□□ -0.29
PRKCB-209ENST00000498058 OR8I2Q8N0Y5 310 aa13.22□□□□□ -0.29
PRKCB-209ENST00000498058 TMED6Q8WW62 240 aa13.22□□□□□ -0.29
PRKCB-209ENST00000498058 UHRF2Q96PU4 802 aa13.22□□□□□ -0.29
PRKCB-209ENST00000498058 SLC35B3Q9H1N7 401 aa13.22□□□□□ -0.29
PRKCB-209ENST00000498058 FUT9Q9Y231 359 aa13.22□□□□□ -0.29
PRKCB-209ENST00000498058 PKD1P98161 4303 aa13.22□□□□□ -0.29
PRKCB-209ENST00000498058 IGHV3OR16-12A0A075B7B8 117 aa13.21□□□□□ -0.29
PRKCB-209ENST00000498058 M0R2N4 97 aa13.21□□□□□ -0.29
PRKCB-209ENST00000498058 RPL7P18124 248 aaKnown RBP13.21□□□□□ -0.29
PRKCB-209ENST00000498058 RAB2AP61019 212 aa13.21□□□□□ -0.29
PRKCB-209ENST00000498058 DPPA3Q6W0C5 159 aa13.21□□□□□ -0.29
PRKCB-209ENST00000498058 C20orf173Q96LM9 149 aa13.21□□□□□ -0.29
PRKCB-209ENST00000498058 ACTR3CQ9C0K3 210 aaPredicted RBP13.21□□□□□ -0.29
PRKCB-209ENST00000498058 SLC25A22Q9H936 323 aa13.21□□□□□ -0.29
PRKCB-209ENST00000498058 RFNGQ9Y644 331 aa13.21□□□□□ -0.29
PRKCB-209ENST00000498058 DNAH11Q96DT5 4516 aa13.2□□□□□ -0.3
PRKCB-209ENST00000498058 GALR1P47211 349 aa13.2□□□□□ -0.3
PRKCB-209ENST00000498058 CDC34P49427 236 aaPredicted RBP13.2□□□□□ -0.3
PRKCB-209ENST00000498058 FAM122CQ6P4D5 195 aa13.2□□□□□ -0.3
PRKCB-209ENST00000498058 FOXI2Q6ZQN5 318 aa13.2□□□□□ -0.3
PRKCB-209ENST00000498058 LINC00336Q6ZUF6 198 aa13.2□□□□□ -0.3
PRKCB-209ENST00000498058 BPIFA4PQ86YQ2 179 aa13.2□□□□□ -0.3
PRKCB-209ENST00000498058 C1orf158Q8N1D5 194 aa13.2□□□□□ -0.3
PRKCB-209ENST00000498058 NDUFAF3Q9BU61 184 aa13.2□□□□□ -0.3
PRKCB-209ENST00000498058 PSMB3P49720 205 aa13.19□□□□□ -0.3
PRKCB-209ENST00000498058 KHDC3LQ587J8 217 aa13.19□□□□□ -0.3
PRKCB-209ENST00000498058 OR4B1Q8NGF8 309 aa13.19□□□□□ -0.3
PRKCB-209ENST00000498058 CLUHP3Q96NS8 147 aa13.19□□□□□ -0.3
PRKCB-209ENST00000498058 RPRMQ9NS64 109 aa13.19□□□□□ -0.3
PRKCB-209ENST00000498058 DKK2Q9UBU2 259 aa13.19□□□□□ -0.3
PRKCB-209ENST00000498058 SMIM9A6NGZ8 99 aa13.18□□□□□ -0.3
PRKCB-209ENST00000498058 SPART-AS1P0CW21 52 aa13.18□□□□□ -0.3
PRKCB-209ENST00000498058 P0DMU3 169 aa13.18□□□□□ -0.3
PRKCB-209ENST00000498058 FAM231AP0DMU4 169 aa13.18□□□□□ -0.3
PRKCB-209ENST00000498058 FAM231CP0DMU5 169 aa13.18□□□□□ -0.3
PRKCB-209ENST00000498058 MEOX2P50222 304 aa13.18□□□□□ -0.3
PRKCB-209ENST00000498058 FAM222AQ5U5X8 452 aa13.18□□□□□ -0.3
PRKCB-209ENST00000498058 NACAE9PAV3 2078 aa13.17□□□□□ -0.3
PRKCB-209ENST00000498058 CTXND1A0A1B0GTU2 59 aa13.17□□□□□ -0.3
PRKCB-209ENST00000498058 ID1P41134 155 aa13.17□□□□□ -0.3
PRKCB-209ENST00000498058 SAMD13Q5VXD3 122 aa13.17□□□□□ -0.3
PRKCB-209ENST00000498058 MIR17HGQ75NE6 70 aa13.17□□□□□ -0.3
PRKCB-209ENST00000498058 TMEM14CQ9P0S9 112 aa13.17□□□□□ -0.3
PRKCB-209ENST00000498058 A0A0J9YX75 114 aa13.16□□□□□ -0.3
PRKCB-209ENST00000498058 OR7C2O60412 319 aa13.16□□□□□ -0.3
PRKCB-209ENST00000498058 IFNA7P01567 189 aa13.16□□□□□ -0.3
PRKCB-209ENST00000498058 SULT1A2P50226 295 aa13.16□□□□□ -0.3
PRKCB-209ENST00000498058 PSG9Q00887 426 aa13.16□□□□□ -0.3
PRKCB-209ENST00000498058 SPATA31B1PQ5VZV4 182 aa13.16□□□□□ -0.3
PRKCB-209ENST00000498058 ALKAL2Q6UX46 152 aa13.16□□□□□ -0.3
PRKCB-209ENST00000498058 PQLC2Q6ZP29 291 aa13.16□□□□□ -0.3
PRKCB-209ENST00000498058 FAM213BQ8TBF2 198 aa13.16□□□□□ -0.3
PRKCB-209ENST00000498058 RNF141Q8WVD5 230 aa13.16□□□□□ -0.3
PRKCB-209ENST00000498058 RAB24Q969Q5 203 aa13.16□□□□□ -0.3
PRKCB-209ENST00000498058 TMEM189A5PLL7 270 aa13.15□□□□□ -0.3
PRKCB-209ENST00000498058 PRSS29PA6NIE9 313 aa13.15□□□□□ -0.3
PRKCB-209ENST00000498058 A8MTW9 85 aa13.15□□□□□ -0.3
PRKCB-209ENST00000498058 TEX46H3BTG2 121 aa13.15□□□□□ -0.3
PRKCB-209ENST00000498058 ISLRO14498 428 aa13.15□□□□□ -0.3
PRKCB-209ENST00000498058 PRM2P04554 102 aa13.15□□□□□ -0.3
PRKCB-209ENST00000498058 AMTNQ6UX39 209 aa13.15□□□□□ -0.3
PRKCB-209ENST00000498058 NIPSNAP3BQ9BS92 247 aa13.15□□□□□ -0.3
PRKCB-209ENST00000498058 SLC25A2Q9BXI2 301 aa13.15□□□□□ -0.3
PRKCB-209ENST00000498058 OR51M1Q9H341 326 aa13.15□□□□□ -0.3
PRKCB-209ENST00000498058 IGLV2-18A0A075B6J9 118 aa13.14□□□□□ -0.31
PRKCB-209ENST00000498058 TRAV5A0A0B4J249 113 aa13.14□□□□□ -0.31
PRKCB-209ENST00000498058 CXorf1O96002 111 aa13.14□□□□□ -0.31
PRKCB-209ENST00000498058 GUK1Q16774 197 aa13.14□□□□□ -0.31
PRKCB-209ENST00000498058 LGALS9BQ3B8N2 356 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms