RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 NKAPP1Q8N9T2 125 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 UBAC2Q8NBM4 344 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 CSNK1G2-AS1Q8NCQ2 148 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 OR1L8Q8NGR8 309 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 OR13C8Q8NGS7 320 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 OR51H1Q8NH63 302 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 TERB2Q8NHR7 220 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 LSM10Q969L4 123 aaKnown RBP4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 GALNT14Q96FL9 552 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 PRRT1Q99946 306 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 ALX4Q9H161 411 aaPredicted RBP4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 FKBP11Q9NYL4 201 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 PRNDQ9UKY0 176 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 TP53TG1Q9Y2A0 90 aa4.28□□□□□ -1.72
TMEM39A-212ENST00000497993 CSMD3Q7Z407 3707 aa4.28□□□□□ -1.73
TMEM39A-212ENST00000497993 TRAV3A0A0B4J244 114 aa4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 TMEM238C9JI98 176 aa4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 DUSP14O95147 198 aaKnown RBP4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 TRBV12-3P01733 135 aa4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 CTSDP07339 412 aaPredicted RBP4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 PGAM2P15259 253 aa4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 ERVFC1-1P60608 527 aa4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 PRCDQ00LT1 54 aa4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 WT1-ASQ06250 92 aa4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 BAXQ07812 192 aa4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 C15orf32Q32M92 178 aa4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 LINC00299Q6ZSB3 139 aa4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 OR4C16Q8NGL9 310 aa4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 OR2G3Q8NGZ4 309 aa4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 OR1P1Q8NH06 330 aa4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 SMIM12Q96EX1 92 aa4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 SDHCQ99643 169 aaPredicted RBP4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 ZNF436Q9C0F3 470 aaPredicted RBP4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 COMMD5Q9GZQ3 224 aa4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 COA4Q9NYJ1 87 aa4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 RSL24D1Q9UHA3 163 aaKnown RBP4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 VAX2Q9UIW0 290 aa4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 F11RQ9Y624 299 aaKnown RBP4.27□□□□□ -1.73
TMEM39A-212ENST00000497993 IGLV7-46A0A075B6I9 117 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 TEX50A0A1B0GTY4 177 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 FAM25AB3EWG3 89 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 FAM25CB3EWG5 89 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 FAM25GB3EWG6 89 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 K7EIM0 57 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 TAAR5O14804 337 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 CYB5BO43169 146 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 GGCTO75223 188 aaKnown RBP4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 CDS2O95674 445 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 IGKV1-5P01602 117 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 IGHV3-11P01762 117 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 PRB2P02812 416 aaPredicted RBP4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 AKAIN1P0CW23 69 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 TRAPPC2P0DI81 140 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 TRAPPC2BP0DI82 140 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 HIST1H1EP10412 219 aaKnown RBP4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 LPAR6P43657 344 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 PIGPP57054 158 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 PRR3P79522 188 aaKnown RBP4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 ATP5G2Q06055 141 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 KIAA0087Q14695 138 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 COA6Q5JTJ3 125 aaKnown RBP4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 LCN12Q6JVE5 192 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 SMIM29Q86T20 159 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 Q8NBF4 154 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 CASTOR1Q8WTX7 329 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 MARC2Q969Z3 335 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 DIRAS2Q96HU8 199 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 TP53RKQ96S44 253 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 PHB2Q99623 299 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 KIR2DL4Q99706 377 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 RTBDNQ9BSG5 229 aaPredicted RBP4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 TMEM222Q9H0R3 208 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 MAP1LC3AQ9H492 121 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 CACFD1Q9UGQ2 172 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 SMAD5-AS1Q9Y6J3 95 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 TENM2Q9NT68 2774 aa4.26□□□□□ -1.73
TMEM39A-212ENST00000497993 PIGBOS1A0A0B4J2F0 54 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 A0A1B0GUV1 79 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 DUXBA0A1W2PPF3 345 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 CRYM-AS1A6NIL9 109 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 C2orf70A6NJV1 201 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 J3QRK9 145 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 ATG12O94817 140 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 SPNP16150 400 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 BTCP35070 178 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 G6PCP35575 357 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 HSPE1P61604 102 aaKnown RBP4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 SUPT4H1P63272 117 aaKnown RBP4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 TTC32Q5I0X7 151 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 LEMD1Q68G75 181 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 LAMTOR1Q6IAA8 161 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 LINC00322Q6ZN03 302 aaPredicted RBP4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 SMIM15Q7Z3B0 74 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 OR1S1Q8NH92 325 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 MCFD2Q8NI22 146 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 LHFPL5Q8TAF8 219 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 RBPMSQ93062 196 aaKnown RBP4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 OR10C1Q96KK4 312 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 FAM19A4Q96LR4 140 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms