RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 FER1L6-AS2Q96M78 137 aa8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 IGHV3OR16-13A0A075B7E8 117 aa8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 IGHV3-74A0A0B4J1X5 117 aa8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 A0A1W2PPI3 338 aa8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 APOBEC3AP31941 199 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 TNFAIP6P98066 277 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 TMEM133Q9H2Q1 129 aa8.47□□□□□ -1.05
TRAPPC12-223ENST00000497597 RIF1Q5UIP0 2472 aaKnown RBP8.46□□□□□ -1.05
TRAPPC12-223ENST00000497597 C19orf71A6NCJ1 209 aa8.46□□□□□ -1.05
TRAPPC12-223ENST00000497597 SRRM5B3KS81 715 aa8.46□□□□□ -1.05
TRAPPC12-223ENST00000497597 PRRG2O14669 202 aa8.46□□□□□ -1.05
TRAPPC12-223ENST00000497597 RPL27AP46776 148 aaKnown RBP8.46□□□□□ -1.05
TRAPPC12-223ENST00000497597 FOXI2Q6ZQN5 318 aa8.46□□□□□ -1.05
TRAPPC12-223ENST00000497597 PRR7Q8TB68 274 aa8.46□□□□□ -1.05
TRAPPC12-223ENST00000497597 VKORC1Q9BQB6 163 aa8.46□□□□□ -1.05
TRAPPC12-223ENST00000497597 AAMDCQ9H7C9 122 aa8.46□□□□□ -1.05
TRAPPC12-223ENST00000497597 SVEP1Q4LDE5 3571 aa8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 LY6G6EA0A0G2JKS1 128 aa8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 PRSS29PA6NIE9 313 aa8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 NCBP2LA6PVI3 153 aaKnown RBP8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 F8W1H4 67 aa8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 GAS8-AS1O95177 125 aa8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 IGHV3-23P01764 117 aa8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 MZT1Q08AG7 82 aa8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 C8orf86Q6ZUL3 223 aa8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 FAM90A1Q86YD7 464 aa8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 CEND1Q8N111 149 aa8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 MYOZ3Q8TDC0 251 aa8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 CCL17Q92583 94 aa8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 MLST8Q9BVC4 326 aa8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 PRSS22Q9GZN4 317 aa8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 C7orf69Q9H7B7 122 aa8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 MRPL35Q9NZE8 188 aaKnown RBP8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 SPRR3Q9UBC9 169 aa8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 U3KQA8 63 aa8.46□□□□□ -1.06
TRAPPC12-223ENST00000497597 FAM90A27PA6NNH2 459 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 WISP2O76076 250 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 DPM2O94777 84 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 COX7A1P24310 79 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 CD40P25942 277 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 A0A096LNJ9 63 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 EMP1P54849 157 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 KLF17Q5JT82 389 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 FAM104BQ5XKR9 115 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 SMIM20Q8N5G0 67 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 NDUFA4L2Q9NRX3 87 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 RELNP78509 3460 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 IGKV1D-37A0A075B6S9 117 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 OR11H12B2RN74 326 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 CNTFRP26992 372 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 EFNA4P52798 201 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 OR11H1Q8NG94 326 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 OR11H2Q8NH07 326 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 IGFBPL1Q8WX77 278 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 OTORQ9NRC9 128 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 BEX4Q9NWD9 120 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 ZNF492Q9P255 531 aa8.45□□□□□ -1.06
TRAPPC12-223ENST00000497597 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.44□□□□□ -1.061e-6■■■■□ 23.9
TRAPPC12-223ENST00000497597 LINC01549A6NIU2 74 aa8.44□□□□□ -1.06
TRAPPC12-223ENST00000497597 CCL11P51671 97 aa8.44□□□□□ -1.06
TRAPPC12-223ENST00000497597 TMEM164Q5U3C3 297 aa8.44□□□□□ -1.06
TRAPPC12-223ENST00000497597 OR4C13Q8NGP0 309 aa8.44□□□□□ -1.06
TRAPPC12-223ENST00000497597 SLC25A39Q9BZJ4 359 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC12-223ENST00000497597 RNF7Q9UBF6 113 aa8.44□□□□□ -1.06
TRAPPC12-223ENST00000497597 DSCAMO60469 2012 aa8.44□□□□□ -1.06
TRAPPC12-223ENST00000497597 SPRY2O43597 315 aa8.44□□□□□ -1.06
TRAPPC12-223ENST00000497597 SCGB1A1P11684 91 aa8.44□□□□□ -1.06
TRAPPC12-223ENST00000497597 RPL7P18124 248 aaKnown RBP8.44□□□□□ -1.06
TRAPPC12-223ENST00000497597 CT83Q5H943 113 aa8.44□□□□□ -1.06
TRAPPC12-223ENST00000497597 SHISA2Q6UWI4 295 aa8.44□□□□□ -1.06
TRAPPC12-223ENST00000497597 MAPKAPK5-AS1Q8N8E1 139 aa8.44□□□□□ -1.06
TRAPPC12-223ENST00000497597 RITA1Q96K30 269 aa8.44□□□□□ -1.06
TRAPPC12-223ENST00000497597 COL5A1P20908 1838 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC12-223ENST00000497597 GFRA4Q9GZZ7 299 aa8.44□□□□□ -1.06
TRAPPC12-223ENST00000497597 FBXL15Q9H469 300 aa8.44□□□□□ -1.06
TRAPPC12-223ENST00000497597 TRAV26-2A0A0B4J265 109 aa8.43□□□□□ -1.06
TRAPPC12-223ENST00000497597 SH2D1AO60880 128 aa8.43□□□□□ -1.06
TRAPPC12-223ENST00000497597 TEX29Q8N6K0 151 aa8.43□□□□□ -1.06
TRAPPC12-223ENST00000497597 MAFAQ8NHW3 353 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC12-223ENST00000497597 SCNM1Q9BWG6 230 aa8.43□□□□□ -1.06
TRAPPC12-223ENST00000497597 LINC01548A6NM66 108 aa8.43□□□□□ -1.06
TRAPPC12-223ENST00000497597 C16orf97H3BN30 126 aa8.43□□□□□ -1.06
TRAPPC12-223ENST00000497597 HOXA3O43365 443 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC12-223ENST00000497597 Q1RN00 199 aa8.43□□□□□ -1.06
TRAPPC12-223ENST00000497597 ZZEF1O43149 2961 aa8.43□□□□□ -1.06
TRAPPC12-223ENST00000497597 HLA-DRB4P13762 266 aa8.42□□□□□ -1.06
TRAPPC12-223ENST00000497597 HES1Q14469 280 aa8.42□□□□□ -1.06
TRAPPC12-223ENST00000497597 HLA-DRB4X5D2U9 266 aa8.42□□□□□ -1.06
TRAPPC12-223ENST00000497597 DMXL1Q9Y485 3027 aa8.42□□□□□ -1.06
TRAPPC12-223ENST00000497597 TRAV8-2A0A0B4J237 113 aa8.42□□□□□ -1.06
TRAPPC12-223ENST00000497597 IGHV3-66A0A0C4DH42 116 aa8.42□□□□□ -1.06
TRAPPC12-223ENST00000497597 GP9P14770 177 aa8.42□□□□□ -1.06
TRAPPC12-223ENST00000497597 MSMPQ1L6U9 139 aa8.42□□□□□ -1.06
TRAPPC12-223ENST00000497597 C8orf46Q8TAG6 207 aa8.42□□□□□ -1.06
TRAPPC12-223ENST00000497597 KIR2DL4Q99706 377 aa8.42□□□□□ -1.06
TRAPPC12-223ENST00000497597 SMPXQ9UHP9 88 aa8.42□□□□□ -1.06
TRAPPC12-223ENST00000497597 IGHV3-49A0A0A0MS15 119 aa8.42□□□□□ -1.06
TRAPPC12-223ENST00000497597 CR1LQ2VPA4 569 aa8.42□□□□□ -1.06
TRAPPC12-223ENST00000497597 NGBQ9NPG2 151 aa8.42□□□□□ -1.06
TRAPPC12-223ENST00000497597 KLF12Q9Y4X4 402 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms