RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 UBE2L3P68036 154 aaKnown RBP11.84□□□□□ -0.51
FAM3A-220ENST00000497506 PSG9Q00887 426 aa11.84□□□□□ -0.51
FAM3A-220ENST00000497506 OR8A1Q8NGG7 326 aa11.84□□□□□ -0.51
FAM3A-220ENST00000497506 RAB24Q969Q5 203 aa11.84□□□□□ -0.51
FAM3A-220ENST00000497506 ZNF471Q9BX82 626 aaPredicted RBP11.84□□□□□ -0.51
FAM3A-220ENST00000497506 PFDN1O60925 122 aa11.83□□□□□ -0.52
FAM3A-220ENST00000497506 DUSP14O95147 198 aaKnown RBP11.83□□□□□ -0.52
FAM3A-220ENST00000497506 STAG3L2P0CL84 134 aa11.83□□□□□ -0.52
FAM3A-220ENST00000497506 STAG3L3P0CL85 134 aa11.83□□□□□ -0.52
FAM3A-220ENST00000497506 NUTF2P61970 127 aaKnown RBP11.83□□□□□ -0.52
FAM3A-220ENST00000497506 AMTNQ6UX39 209 aa11.83□□□□□ -0.52
FAM3A-220ENST00000497506 PQLC2Q6ZP29 291 aa11.83□□□□□ -0.52
FAM3A-220ENST00000497506 SSX7Q7RTT5 188 aa11.83□□□□□ -0.52
FAM3A-220ENST00000497506 EXOC3-AS1Q8N2X6 119 aa11.83□□□□□ -0.52
FAM3A-220ENST00000497506 CSNK1G2-AS1Q8NCQ2 148 aa11.83□□□□□ -0.52
FAM3A-220ENST00000497506 MRPL53Q96EL3 112 aaKnown RBP11.83□□□□□ -0.52
FAM3A-220ENST00000497506 PHYHIPLQ96FC7 376 aa11.83□□□□□ -0.52
FAM3A-220ENST00000497506 ACTR3CQ9C0K3 210 aaPredicted RBP11.83□□□□□ -0.52
FAM3A-220ENST00000497506 PLA2G2EQ9NZK7 142 aa11.83□□□□□ -0.52
FAM3A-220ENST00000497506 M0R3E3 92 aa11.82□□□□□ -0.52
FAM3A-220ENST00000497506 SEC11BP0C7V7 166 aa11.82□□□□□ -0.52
FAM3A-220ENST00000497506 ARL14EPLP0DKL9 152 aa11.82□□□□□ -0.52
FAM3A-220ENST00000497506 ZNF726P1Q15940 193 aa11.82□□□□□ -0.52
FAM3A-220ENST00000497506 SLC35B3Q9H1N7 401 aa11.82□□□□□ -0.52
FAM3A-220ENST00000497506 PRELID1Q9Y255 219 aa11.82□□□□□ -0.52
FAM3A-220ENST00000497506 FXYD7P58549 80 aa11.81□□□□□ -0.52
FAM3A-220ENST00000497506 HIST1H1AQ02539 215 aaPredicted RBP11.81□□□□□ -0.52
FAM3A-220ENST00000497506 ICAM4Q14773 271 aa11.81□□□□□ -0.52
FAM3A-220ENST00000497506 AKR1C8PQ5T2L2 129 aa11.81□□□□□ -0.52
FAM3A-220ENST00000497506 BAP18Q8IXM2 172 aa11.81□□□□□ -0.52
FAM3A-220ENST00000497506 AAMDCQ9H7C9 122 aa11.81□□□□□ -0.52
FAM3A-220ENST00000497506 XCL2Q9UBD3 114 aa11.81□□□□□ -0.52
FAM3A-220ENST00000497506 RANP62826 216 aaKnown RBP11.8□□□□□ -0.52
FAM3A-220ENST00000497506 EIF5AP63241 154 aaKnown RBP11.8□□□□□ -0.52
FAM3A-220ENST00000497506 ZFP69Q49AA0 526 aa11.8□□□□□ -0.52
FAM3A-220ENST00000497506 LYPD1Q8N2G4 141 aa11.8□□□□□ -0.52
FAM3A-220ENST00000497506 C9orf62Q8N4C0 152 aa11.8□□□□□ -0.52
FAM3A-220ENST00000497506 STOML3Q8TAV4 291 aa11.8□□□□□ -0.52
FAM3A-220ENST00000497506 SUN5Q8TC36 379 aa11.8□□□□□ -0.52
FAM3A-220ENST00000497506 C1QTNF4Q9BXJ3 329 aa11.8□□□□□ -0.52
FAM3A-220ENST00000497506 EDA2RQ9HAV5 297 aa11.8□□□□□ -0.52
FAM3A-220ENST00000497506 CTXND1A0A1B0GTU2 59 aa11.79□□□□□ -0.52
FAM3A-220ENST00000497506 TPT1P13693 172 aaKnown RBP11.79□□□□□ -0.52
FAM3A-220ENST00000497506 GCHFRP30047 84 aa11.79□□□□□ -0.52
FAM3A-220ENST00000497506 OR10J6PQ8NGY7 276 aa11.79□□□□□ -0.52
FAM3A-220ENST00000497506 RARRES2Q99969 163 aa11.79□□□□□ -0.52
FAM3A-220ENST00000497506 Q9H3A6 140 aa11.79□□□□□ -0.52
FAM3A-220ENST00000497506 NPIPB6E9PJ23 425 aa11.78□□□□□ -0.52
FAM3A-220ENST00000497506 CXorf1O96002 111 aa11.78□□□□□ -0.52
FAM3A-220ENST00000497506 OR11H2Q8NH07 326 aa11.78□□□□□ -0.52
FAM3A-220ENST00000497506 WWC2-AS2Q96NR7 200 aa11.78□□□□□ -0.52
FAM3A-220ENST00000497506 UMAD1C9J7I0 102 aa11.77□□□□□ -0.53
FAM3A-220ENST00000497506 M0R2Z0 102 aa11.77□□□□□ -0.53
FAM3A-220ENST00000497506 FHITP49789 147 aa11.77□□□□□ -0.53
FAM3A-220ENST00000497506 SPINK13Q1W4C9 94 aa11.77□□□□□ -0.53
FAM3A-220ENST00000497506 TMED6Q8WW62 240 aa11.77□□□□□ -0.53
FAM3A-220ENST00000497506 OTORQ9NRC9 128 aa11.77□□□□□ -0.53
FAM3A-220ENST00000497506 ZNF705EA8MWA4 302 aaPredicted RBP11.76□□□□□ -0.53
FAM3A-220ENST00000497506 BOLA2-SMG1P6H3BVE0 249 aa11.76□□□□□ -0.53
FAM3A-220ENST00000497506 CRXO43186 299 aaPredicted RBP11.76□□□□□ -0.53
FAM3A-220ENST00000497506 SLC51BQ86UW2 128 aa11.76□□□□□ -0.53
FAM3A-220ENST00000497506 X6R8D5 127 aa11.76□□□□□ -0.53
FAM3A-220ENST00000497506 IGKV2-40A0A087WW87 121 aaPredicted RBP11.75□□□□□ -0.53
FAM3A-220ENST00000497506 PGPA6NDG6 321 aa11.75□□□□□ -0.53
FAM3A-220ENST00000497506 IGKV2D-40P01614 121 aaPredicted RBP11.75□□□□□ -0.53
FAM3A-220ENST00000497506 AMBPP02760 352 aa11.75□□□□□ -0.53
FAM3A-220ENST00000497506 CT45A10P0DMU9 189 aa11.75□□□□□ -0.53
FAM3A-220ENST00000497506 FGF8P55075 233 aaPredicted RBP11.75□□□□□ -0.53
FAM3A-220ENST00000497506 ERCC8Q13216 396 aa11.75□□□□□ -0.53
FAM3A-220ENST00000497506 ZNF705AQ6ZN79 300 aaPredicted RBP11.75□□□□□ -0.53
FAM3A-220ENST00000497506 C9orf47Q6ZRZ4 202 aa11.75□□□□□ -0.53
FAM3A-220ENST00000497506 C1orf158Q8N1D5 194 aa11.75□□□□□ -0.53
FAM3A-220ENST00000497506 IGF2BP2-AS1Q96M15 143 aa11.75□□□□□ -0.53
FAM3A-220ENST00000497506 AGPAT4-IT1Q9H0P7 198 aa11.75□□□□□ -0.53
FAM3A-220ENST00000497506 TMPRSS5Q9H3S3 457 aa11.75□□□□□ -0.53
FAM3A-220ENST00000497506 TMEM167BQ9NRX6 74 aa11.75□□□□□ -0.53
FAM3A-220ENST00000497506 PPP1R14DQ9NXH3 145 aa11.75□□□□□ -0.53
FAM3A-220ENST00000497506 A0A0J9YWU9 116 aa11.74□□□□□ -0.53
FAM3A-220ENST00000497506 MAP1LC3B2A6NCE7 125 aa11.74□□□□□ -0.53
FAM3A-220ENST00000497506 CSN1S1P47710 185 aa11.74□□□□□ -0.53
FAM3A-220ENST00000497506 NKX2-5P52952 324 aaPredicted RBP11.74□□□□□ -0.53
FAM3A-220ENST00000497506 FAM213BQ8TBF2 198 aa11.74□□□□□ -0.53
FAM3A-220ENST00000497506 ODF3Q96PU9 254 aa11.74□□□□□ -0.53
FAM3A-220ENST00000497506 VGLL1Q99990 258 aa11.74□□□□□ -0.53
FAM3A-220ENST00000497506 MAP1LC3BQ9GZQ8 125 aa11.74□□□□□ -0.53
FAM3A-220ENST00000497506 TRAV12-2A0A075B6T6 113 aa11.73□□□□□ -0.53
FAM3A-220ENST00000497506 DIRC3C9JPN6 131 aa11.73□□□□□ -0.53
FAM3A-220ENST00000497506 CDKN1BP46527 198 aa11.73□□□□□ -0.53
FAM3A-220ENST00000497506 DPPA3Q6W0C5 159 aa11.73□□□□□ -0.53
FAM3A-220ENST00000497506 IQCF2Q8IXL9 164 aa11.73□□□□□ -0.53
FAM3A-220ENST00000497506 Q8NAQ8 132 aa11.73□□□□□ -0.53
FAM3A-220ENST00000497506 RXFP4Q8TDU9 374 aa11.73□□□□□ -0.53
FAM3A-220ENST00000497506 MBD3L1Q8WWY6 194 aa11.73□□□□□ -0.53
FAM3A-220ENST00000497506 LINC00477Q96M19 166 aa11.73□□□□□ -0.53
FAM3A-220ENST00000497506 RBAKDNA6NC62 111 aa11.72□□□□□ -0.53
FAM3A-220ENST00000497506 RBMY1A1P0DJD3 496 aaKnown RBP11.72□□□□□ -0.53
FAM3A-220ENST00000497506 RBMY1CP0DJD4 496 aa11.72□□□□□ -0.53
FAM3A-220ENST00000497506 MIFP14174 115 aa11.72□□□□□ -0.53
FAM3A-220ENST00000497506 KIR3DS1Q14943 382 aa11.72□□□□□ -0.53
FAM3A-220ENST00000497506 RBMY1FQ15415 496 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms