RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 TNP2Q05952 138 aa11.79□□□□□ -0.52
TRAPPC3-207ENST00000497251 SLC38A11Q08AI6 406 aa11.79□□□□□ -0.52
TRAPPC3-207ENST00000497251 RAB32Q13637 225 aa11.79□□□□□ -0.52
TRAPPC3-207ENST00000497251 LCN15Q6UWW0 184 aa11.79□□□□□ -0.52
TRAPPC3-207ENST00000497251 SLC50A1Q9BRV3 221 aa11.79□□□□□ -0.52
TRAPPC3-207ENST00000497251 TRAV12-2A0A075B6T6 113 aa11.78□□□□□ -0.52
TRAPPC3-207ENST00000497251 H3BNG1 76 aa11.78□□□□□ -0.52
TRAPPC3-207ENST00000497251 SULT1A1P50225 295 aa11.78□□□□□ -0.52
TRAPPC3-207ENST00000497251 IGFL4Q6B9Z1 124 aa11.78□□□□□ -0.52
TRAPPC3-207ENST00000497251 CCDC28AQ8IWP9 274 aa11.78□□□□□ -0.52
TRAPPC3-207ENST00000497251 RNASE8Q8TDE3 154 aaKnown RBP11.78□□□□□ -0.52
TRAPPC3-207ENST00000497251 RPUSD4Q96CM3 377 aaKnown RBP11.78□□□□□ -0.52
TRAPPC3-207ENST00000497251 A0A1W2PPQ1 181 aa11.77□□□□□ -0.53
TRAPPC3-207ENST00000497251 FAM24AA6NFZ4 105 aa11.77□□□□□ -0.53
TRAPPC3-207ENST00000497251 GOSR2O14653 212 aa11.77□□□□□ -0.53
TRAPPC3-207ENST00000497251 AGPAT2O15120 278 aa11.77□□□□□ -0.53
TRAPPC3-207ENST00000497251 CST7O76096 145 aa11.77□□□□□ -0.53
TRAPPC3-207ENST00000497251 S100A11P31949 105 aa11.77□□□□□ -0.53
TRAPPC3-207ENST00000497251 HBG1P69891 147 aa11.77□□□□□ -0.53
TRAPPC3-207ENST00000497251 HBG2P69892 147 aa11.77□□□□□ -0.53
TRAPPC3-207ENST00000497251 CYCSP99999 105 aaKnown RBP11.77□□□□□ -0.53
TRAPPC3-207ENST00000497251 VWC2Q2TAL6 325 aa11.77□□□□□ -0.53
TRAPPC3-207ENST00000497251 STX12Q86Y82 276 aa11.77□□□□□ -0.53
TRAPPC3-207ENST00000497251 TMEM252Q8N6L7 170 aa11.77□□□□□ -0.53
TRAPPC3-207ENST00000497251 NMES1Q9C002 83 aa11.77□□□□□ -0.53
TRAPPC3-207ENST00000497251 LINC00588Q9Y4M8 146 aa11.77□□□□□ -0.53
TRAPPC3-207ENST00000497251 PRM2P04554 102 aa11.76□□□□□ -0.53
TRAPPC3-207ENST00000497251 M6PRP20645 277 aa11.76□□□□□ -0.53
TRAPPC3-207ENST00000497251 RAB31Q13636 194 aa11.76□□□□□ -0.53
TRAPPC3-207ENST00000497251 SSX7Q7RTT5 188 aa11.76□□□□□ -0.53
TRAPPC3-207ENST00000497251 BPIFA4PQ86YQ2 179 aa11.76□□□□□ -0.53
TRAPPC3-207ENST00000497251 RNF141Q8WVD5 230 aa11.76□□□□□ -0.53
TRAPPC3-207ENST00000497251 MGST2Q99735 147 aa11.76□□□□□ -0.53
TRAPPC3-207ENST00000497251 ARL6Q9H0F7 186 aa11.76□□□□□ -0.53
TRAPPC3-207ENST00000497251 ARV1Q9H2C2 271 aa11.76□□□□□ -0.53
TRAPPC3-207ENST00000497251 Q9H8V8 135 aa11.76□□□□□ -0.53
TRAPPC3-207ENST00000497251 ZNF331Q9NQX6 463 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC3-207ENST00000497251 UQCC1Q9NVA1 299 aa11.76□□□□□ -0.53
TRAPPC3-207ENST00000497251 IGSF23A1L1A6 192 aa11.75□□□□□ -0.53
TRAPPC3-207ENST00000497251 RLN2P04090 185 aa11.75□□□□□ -0.53
TRAPPC3-207ENST00000497251 FCN2Q15485 313 aa11.75□□□□□ -0.53
TRAPPC3-207ENST00000497251 ATP6V1FQ16864 119 aa11.75□□□□□ -0.53
TRAPPC3-207ENST00000497251 LINC00612Q8N6U2 182 aa11.75□□□□□ -0.53
TRAPPC3-207ENST00000497251 RXFP4Q8TDU9 374 aa11.75□□□□□ -0.53
TRAPPC3-207ENST00000497251 GNPNAT1Q96EK6 184 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC3-207ENST00000497251 UHRF2Q96PU4 802 aa11.75□□□□□ -0.53
TRAPPC3-207ENST00000497251 UPK3BQ9BT76 320 aa11.75□□□□□ -0.53
TRAPPC3-207ENST00000497251 NOP10Q9NPE3 64 aaKnown RBP11.75□□□□□ -0.53
TRAPPC3-207ENST00000497251 WDR83OSQ9Y284 106 aa11.75□□□□□ -0.53
TRAPPC3-207ENST00000497251 PXMP4Q9Y6I8 212 aa11.75□□□□□ -0.53
TRAPPC3-207ENST00000497251 ABCA13Q86UQ4 5058 aa11.75□□□□□ -0.53
TRAPPC3-207ENST00000497251 HSPG2P98160 4391 aa11.74□□□□□ -0.53
TRAPPC3-207ENST00000497251 E5RGE8 158 aa11.74□□□□□ -0.53
TRAPPC3-207ENST00000497251 MRPS12O15235 138 aaKnown RBP11.74□□□□□ -0.53
TRAPPC3-207ENST00000497251 HTN1P15515 57 aa11.74□□□□□ -0.53
TRAPPC3-207ENST00000497251 CAMLGP49069 296 aa11.74□□□□□ -0.53
TRAPPC3-207ENST00000497251 PATE2Q6UY27 113 aa11.74□□□□□ -0.53
TRAPPC3-207ENST00000497251 ODF3Q96PU9 254 aa11.74□□□□□ -0.53
TRAPPC3-207ENST00000497251 SIX6O95475 246 aa11.73□□□□□ -0.53
TRAPPC3-207ENST00000497251 GUK1Q16774 197 aa11.73□□□□□ -0.53
TRAPPC3-207ENST00000497251 LINC00305Q7Z4B0 112 aa11.73□□□□□ -0.53
TRAPPC3-207ENST00000497251 CHAC2Q8WUX2 184 aa11.73□□□□□ -0.53
TRAPPC3-207ENST00000497251 KRTAP4-5Q9BYR2 181 aa11.73□□□□□ -0.53
TRAPPC3-207ENST00000497251 Q9H3A6 140 aa11.73□□□□□ -0.53
TRAPPC3-207ENST00000497251 SNURFLB1AK76 121 aa11.72□□□□□ -0.53
TRAPPC3-207ENST00000497251 SSNA1O43805 119 aa11.72□□□□□ -0.53
TRAPPC3-207ENST00000497251 COX7A2P2O60397 106 aa11.72□□□□□ -0.53
TRAPPC3-207ENST00000497251 MPDU1O75352 247 aa11.72□□□□□ -0.53
TRAPPC3-207ENST00000497251 RPL29P47914 159 aaKnown RBP11.72□□□□□ -0.53
TRAPPC3-207ENST00000497251 OR5I1Q13606 314 aa11.72□□□□□ -0.53
TRAPPC3-207ENST00000497251 Q6ZRG5 221 aa11.72□□□□□ -0.53
TRAPPC3-207ENST00000497251 MAPKAPK5-AS1Q8N8E1 139 aa11.72□□□□□ -0.53
TRAPPC3-207ENST00000497251 SLC25A31Q9H0C2 315 aa11.72□□□□□ -0.53
TRAPPC3-207ENST00000497251 UBE2L5PA0A1B0GUS4 154 aa11.71□□□□□ -0.53
TRAPPC3-207ENST00000497251 H2BFSP57053 126 aa11.71□□□□□ -0.53
TRAPPC3-207ENST00000497251 BAXQ07812 192 aa11.71□□□□□ -0.53
TRAPPC3-207ENST00000497251 DAZ2Q13117 558 aaKnown RBP11.71□□□□□ -0.53
TRAPPC3-207ENST00000497251 OR1L4Q8NGR5 311 aa11.71□□□□□ -0.53
TRAPPC3-207ENST00000497251 TMEM37Q8WXS4 190 aa11.71□□□□□ -0.53
TRAPPC3-207ENST00000497251 C18orf15Q96N68 181 aa11.71□□□□□ -0.53
TRAPPC3-207ENST00000497251 PFDN5Q99471 154 aa11.71□□□□□ -0.53
TRAPPC3-207ENST00000497251 PYGO2Q9BRQ0 406 aa11.71□□□□□ -0.53
TRAPPC3-207ENST00000497251 TRAV26-1A0A087WT03 109 aa11.7□□□□□ -0.54
TRAPPC3-207ENST00000497251 PTTG1O95997 202 aa11.7□□□□□ -0.54
TRAPPC3-207ENST00000497251 PET100P0DJ07 73 aa11.7□□□□□ -0.54
TRAPPC3-207ENST00000497251 LEPP41159 167 aa11.7□□□□□ -0.54
TRAPPC3-207ENST00000497251 OPCMLQ14982 345 aa11.7□□□□□ -0.54
TRAPPC3-207ENST00000497251 LRRC37A5PQ49AS3 106 aa11.7□□□□□ -0.54
TRAPPC3-207ENST00000497251 C10orf113Q5VZT2 155 aa11.7□□□□□ -0.54
TRAPPC3-207ENST00000497251 Q8N1X5 172 aa11.7□□□□□ -0.54
TRAPPC3-207ENST00000497251 PPP1R1CQ8WVI7 109 aa11.7□□□□□ -0.54
TRAPPC3-207ENST00000497251 DNAJC4Q9NNZ3 241 aa11.7□□□□□ -0.54
TRAPPC3-207ENST00000497251 OR5AC2Q9NZP5 309 aa11.7□□□□□ -0.54
TRAPPC3-207ENST00000497251 LRP1BQ9NZR2 4599 aa11.69□□□□□ -0.54
TRAPPC3-207ENST00000497251 H0YIZ8 118 aa11.69□□□□□ -0.54
TRAPPC3-207ENST00000497251 ZNF253O75346 499 aa11.69□□□□□ -0.54
TRAPPC3-207ENST00000497251 MIC13Q5XKP0 118 aa11.69□□□□□ -0.54
TRAPPC3-207ENST00000497251 SLC39A9Q9NUM3 307 aa11.69□□□□□ -0.54
TRAPPC3-207ENST00000497251 MRPS16Q9Y3D3 137 aaKnown RBP11.69□□□□□ -0.54
TRAPPC3-207ENST00000497251 IGLC2P0DOY2 106 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms