RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 ZNF439Q8NDP4 499 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 OR11H1Q8NG94 326 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 OR10G9Q8NGN4 311 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 OR10G7Q8NGN6 311 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 OR11H2Q8NH07 326 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 LSM10Q969L4 123 aaKnown RBP3.87□□□□□ -1.79
CSMD3-208ENST00000497026 CYYR1Q96J86 154 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 ZNF714Q96N38 554 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 CHRDL1Q9BU40 450 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 TMEM70Q9BUB7 260 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 COMMD5Q9GZQ3 224 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 GEMIN7Q9H840 131 aaKnown RBP3.87□□□□□ -1.79
CSMD3-208ENST00000497026 TNFRSF19Q9NS68 423 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 TRAPPC2LQ9UL33 140 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 LINC00312Q9Y6C7 94 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 ARL2-SNX15V9GYD0 113 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 TRAV26-1A0A087WT03 109 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 TRAV8-6A0A0B4J262 113 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 TRAV24A0A0B4J272 114 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 FAM90A18PA6NE21 464 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 FAM90A16PA6NEW6 464 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 FAM90A9PA6NNJ1 464 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 FAM90A5PA8MXJ8 464 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 ODF3BA8MYP8 253 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 H3BP45 60 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 SLC17A3O00476 420 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 HSPB6O14558 160 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 TNFSF12O43508 249 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 SYNGR2O43760 224 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 APOA2P02652 100 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 RBP4P02753 201 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 CLEC3BP05452 202 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 SERPINE2P07093 398 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 FAM90A15PP0C7V4 464 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 FAM90A14PP0C7W9 464 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 IGHV1-8P0DP01 117 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 FABP2P12104 132 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 IGLL1P15814 213 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 COX7A1P24310 79 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 CRYBB3P26998 211 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 SRIP30626 198 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 GPR183P32249 361 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 RBM11P57052 281 aaKnown RBP3.87□□□□□ -1.79
CSMD3-208ENST00000497026 AESQ08117 197 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 SLAQ13239 276 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 CXorf66Q5JRM2 361 aaPredicted RBP3.87□□□□□ -1.79
CSMD3-208ENST00000497026 PRAMEF5Q5TYX0 476 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 Q6ZSV7 163 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 ERASQ7Z444 233 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 C6orf201Q7Z4U5 140 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 MMD2Q8IY49 270 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 OR8I2Q8N0Y5 310 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 ATOH7Q8N100 152 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 TMEM86BQ8N661 226 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 OR2K2Q8NGT1 345 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 OR10AG1Q8NH19 301 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 TSKUQ8WUA8 353 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 SSMEM1Q8WWF3 244 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 C5orf30Q96GV9 206 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 NPFFR1Q9GZQ6 430 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 GTSF1LQ9H1H1 148 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 VSIRQ9H7M9 311 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 LIN7CQ9NUP9 197 aaKnown RBP3.87□□□□□ -1.79
CSMD3-208ENST00000497026 MRPL16Q9NX20 251 aaKnown RBP3.87□□□□□ -1.79
CSMD3-208ENST00000497026 IL36GQ9NZH8 169 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 THYN1Q9P016 225 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 SPCS1Q9Y6A9 102 aa3.87□□□□□ -1.79
CSMD3-208ENST00000497026 IGKV1D-8A0A087WSZ0 117 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 A0A1W2PPV4 95 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 hADV38S2A0JD32 116 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 GAGE12JA6NER3 117 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 F2Z2F3 143 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 ISLRO14498 428 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 PDCD6O75340 191 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 HBZP02008 142 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 APCSP02743 223 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 CGB3P0DN86 165 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 CGB7P0DN87 165 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 KIR2DS4P43632 304 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 PAX9P55771 341 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 GNB1P62873 340 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 RPL24P83731 157 aaKnown RBP3.86□□□□□ -1.79
CSMD3-208ENST00000497026 KIR2DS1Q14954 304 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 IZUMO4Q1ZYL8 232 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 C17orf58Q2M2W7 97 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 RNASEKQ6P5S7 137 aaKnown RBP3.86□□□□□ -1.79
CSMD3-208ENST00000497026 Q6ZS49 121 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 ODF3L1Q8IXM7 274 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 OSR2Q8N2R0 312 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 OR11H6Q8NGC7 330 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 OR13A1Q8NGR1 328 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 VSTM2AQ8TAG5 236 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 PIFOQ8TCI5 191 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 FAM110AQ9BQ89 295 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 CLEC7AQ9BXN2 247 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 SCRT2Q9NQ03 307 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 ZNF331Q9NQX6 463 aaPredicted RBP3.86□□□□□ -1.79
CSMD3-208ENST00000497026 SPANXA1Q9NS26 97 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 VPREB3Q9UKI3 123 aa3.86□□□□□ -1.79
CSMD3-208ENST00000497026 ANK2Q01484 3957 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms