RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	KHDC3L	Q587J8	217 aa		7.13	□□□□□ -1.27
CALD1-223	ENST00000496024	AMTN	Q6UX39	209 aa		7.13	□□□□□ -1.27
CALD1-223	ENST00000496024		Q6ZNX1	250 aa		7.13	□□□□□ -1.27
CALD1-223	ENST00000496024	OR11H4	Q8NGC9	324 aa		7.13	□□□□□ -1.27
CALD1-223	ENST00000496024	OR10J6P	Q8NGY7	276 aa		7.13	□□□□□ -1.27
CALD1-223	ENST00000496024	FXYD5	Q96DB9	178 aa		7.13	□□□□□ -1.27
CALD1-223	ENST00000496024	PHYHIPL	Q96FC7	376 aa		7.13	□□□□□ -1.27
CALD1-223	ENST00000496024	CLUHP3	Q96NS8	147 aa		7.13	□□□□□ -1.27
CALD1-223	ENST00000496024	AAMDC	Q9H7C9	122 aa		7.13	□□□□□ -1.27
CALD1-223	ENST00000496024	TRAV12-2	A0A075B6T6	113 aa		7.12	□□□□□ -1.27
CALD1-223	ENST00000496024	CXorf65	A6NEN9	183 aa		7.12	□□□□□ -1.27
CALD1-223	ENST00000496024		A8MTW9	85 aa		7.12	□□□□□ -1.27
CALD1-223	ENST00000496024	ZNF705E	A8MWA4	302 aa	Predicted RBP	7.12	□□□□□ -1.27
CALD1-223	ENST00000496024	ZNF253	O75346	499 aa		7.12	□□□□□ -1.27
CALD1-223	ENST00000496024	CDC34	P49427	236 aa	Predicted RBP	7.12	□□□□□ -1.27
CALD1-223	ENST00000496024	RAN	P62826	216 aa	Known RBP	7.12	□□□□□ -1.27
CALD1-223	ENST00000496024	ERCC8	Q13216	396 aa		7.12	□□□□□ -1.27
CALD1-223	ENST00000496024	PDE6H	Q13956	83 aa		7.12	□□□□□ -1.27
CALD1-223	ENST00000496024	CASC10	Q5T4H9	136 aa		7.12	□□□□□ -1.27
CALD1-223	ENST00000496024	BAP18	Q8IXM2	172 aa		7.12	□□□□□ -1.27
CALD1-223	ENST00000496024		Q8NAQ8	132 aa		7.12	□□□□□ -1.27
CALD1-223	ENST00000496024	OR2G3	Q8NGZ4	309 aa		7.12	□□□□□ -1.27
CALD1-223	ENST00000496024	IL17D	Q8TAD2	202 aa		7.12	□□□□□ -1.27
CALD1-223	ENST00000496024	GNPNAT1	Q96EK6	184 aa	Predicted RBP	7.12	□□□□□ -1.27
CALD1-223	ENST00000496024	ZNF503	Q96F45	646 aa		7.12	□□□□□ -1.27
CALD1-223	ENST00000496024	PSMG3	Q9BT73	122 aa	Predicted RBP	7.12	□□□□□ -1.27
CALD1-223	ENST00000496024	TMEM208	Q9BTX3	173 aa		7.12	□□□□□ -1.27
CALD1-223	ENST00000496024	GOLT1B	Q9Y3E0	138 aa		7.12	□□□□□ -1.27
CALD1-223	ENST00000496024		X6R8D5	127 aa		7.12	□□□□□ -1.27
CALD1-223	ENST00000496024	BOLA2-SMG1P6	H3BVE0	249 aa		7.11	□□□□□ -1.27
CALD1-223	ENST00000496024		J3KRW8	73 aa		7.11	□□□□□ -1.27
CALD1-223	ENST00000496024	RBMY1A1	P0DJD3	496 aa	Known RBP	7.11	□□□□□ -1.27
CALD1-223	ENST00000496024	RBMY1C	P0DJD4	496 aa		7.11	□□□□□ -1.27
CALD1-223	ENST00000496024	RBMY1F	Q15415	496 aa	Known RBP	7.11	□□□□□ -1.27
CALD1-223	ENST00000496024	C1orf158	Q8N1D5	194 aa		7.11	□□□□□ -1.27
CALD1-223	ENST00000496024	RPP25L	Q8N5L8	163 aa	Known RBP	7.11	□□□□□ -1.27
CALD1-223	ENST00000496024	RAB24	Q969Q5	203 aa		7.11	□□□□□ -1.27
CALD1-223	ENST00000496024	ST6GAL2	Q96JF0	529 aa		7.11	□□□□□ -1.27
CALD1-223	ENST00000496024	IGF2BP2-AS1	Q96M15	143 aa		7.11	□□□□□ -1.27
CALD1-223	ENST00000496024	ARPC5L	Q9BPX5	153 aa		7.11	□□□□□ -1.27
CALD1-223	ENST00000496024	PRELID1	Q9Y255	219 aa		7.11	□□□□□ -1.27
CALD1-223	ENST00000496024	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	HMSD	A8MTL9	139 aa		7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	TAAR5	O14804	337 aa		7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	CRX	O43186	299 aa	Predicted RBP	7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	JTB	O76095	146 aa		7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	INS	P01308	110 aa		7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	IGKV2D-40	P01614	121 aa	Predicted RBP	7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	MB	P02144	154 aa		7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	ARL14EPL	P0DKL9	152 aa		7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	MIF	P14174	115 aa		7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	EMP1	P54849	157 aa		7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	NANOS2	P60321	138 aa	Known RBP	7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	SERF2	P84101	59 aa		7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	KIR3DS1	Q14943	382 aa		7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	ZNF705A	Q6ZN79	300 aa	Predicted RBP	7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	IQCF2	Q8IXL9	164 aa		7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	KCNRG	Q8N5I3	272 aa		7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	C11orf45	Q8TAV5	145 aa		7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	HYLS1	Q96M11	299 aa		7.1	□□□□□ -1.27
CALD1-223	ENST00000496024		Q9H3A6	140 aa		7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	C11orf68	Q9H3H3	251 aa	Known RBP	7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	CYTL1	Q9NRR1	136 aa		7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	RPH3AL	Q9UNE2	315 aa		7.1	□□□□□ -1.27
CALD1-223	ENST00000496024	DYNC2H1	Q8NCM8	4307 aa	Known RBP	7.09	□□□□□ -1.27
CALD1-223	ENST00000496024		A0A0D9SG52	128 aa		7.09	□□□□□ -1.27
CALD1-223	ENST00000496024	KANTR	A0A1W2PQU2	76 aa		7.09	□□□□□ -1.27
CALD1-223	ENST00000496024	ZNF705G	A8MUZ8	300 aa	Predicted RBP	7.09	□□□□□ -1.27
CALD1-223	ENST00000496024	AMBP	P02760	352 aa		7.09	□□□□□ -1.27
CALD1-223	ENST00000496024	PRM2	P04554	102 aa		7.09	□□□□□ -1.27
CALD1-223	ENST00000496024	CT45A10	P0DMU9	189 aa		7.09	□□□□□ -1.27
CALD1-223	ENST00000496024	CSN1S1	P47710	185 aa		7.09	□□□□□ -1.27
CALD1-223	ENST00000496024	AKR1C8P	Q5T2L2	129 aa		7.09	□□□□□ -1.27
CALD1-223	ENST00000496024	PQLC2	Q6ZP29	291 aa		7.09	□□□□□ -1.27
CALD1-223	ENST00000496024	MRPL53	Q96EL3	112 aa	Known RBP	7.09	□□□□□ -1.27
CALD1-223	ENST00000496024	VGLL1	Q99990	258 aa		7.09	□□□□□ -1.27
CALD1-223	ENST00000496024	ZNF471	Q9BX82	626 aa	Predicted RBP	7.09	□□□□□ -1.27
CALD1-223	ENST00000496024	ACTR3C	Q9C0K3	210 aa	Predicted RBP	7.09	□□□□□ -1.27
CALD1-223	ENST00000496024	PLEC	Q15149	4684 aa	Known RBP	7.09	□□□□□ -1.28
CALD1-223	ENST00000496024	LYST	Q99698	3801 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	PGP	A6NDG6	321 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	NPIPB6	E9PJ23	425 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	BCL2L11	O43521	198 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	PFDN1	O60925	122 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	HBE1	P02100	147 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	STAG3L2	P0CL84	134 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	STAG3L3	P0CL85	134 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	HTN1	P15515	57 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	GCHFR	P30047	84 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	TSPO	P30536	169 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	CDKN1B	P46527	198 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	ZNF345	Q14585	488 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	RRN3P1	Q2M238	152 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	TMUB2	Q71RG4	321 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	ZNF767P	Q75MW2	155 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	SSX7	Q7RTT5	188 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	LINC01587	Q99440	93 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	AGPAT4-IT1	Q9H0P7	198 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	CELA1	Q9UNI1	258 aa		7.08	□□□□□ -1.28
CALD1-223	ENST00000496024	KMT2C	Q8NEZ4	4911 aa	Known RBP	7.08	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms