RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 DYNC2LI1Q8TCX1 351 aa9.05□□□□□ -0.96
COL1A1-209ENST00000495677 SMIM4Q8WVI0 70 aa9.05□□□□□ -0.96
COL1A1-209ENST00000495677 BCL7BQ9BQE9 202 aa9.05□□□□□ -0.96
COL1A1-209ENST00000495677 PARD6GQ9BYG4 376 aaPredicted RBP9.05□□□□□ -0.96
COL1A1-209ENST00000495677 SCP2D1Q9UJQ7 156 aa9.05□□□□□ -0.96
COL1A1-209ENST00000495677 FUT9Q9Y231 359 aa9.05□□□□□ -0.96
COL1A1-209ENST00000495677 DNAH8Q96JB1 4490 aa9.05□□□□□ -0.96
COL1A1-209ENST00000495677 TRAV12-3A0A0B4J271 114 aa9.04□□□□□ -0.96
COL1A1-209ENST00000495677 K7EPK0 472 aa9.04□□□□□ -0.96
COL1A1-209ENST00000495677 CTDSPLO15194 276 aa9.04□□□□□ -0.96
COL1A1-209ENST00000495677 OR5G3P0C626 314 aa9.04□□□□□ -0.96
COL1A1-209ENST00000495677 CRYBA4P53673 196 aa9.04□□□□□ -0.96
COL1A1-209ENST00000495677 PXDC1Q5TGL8 231 aa9.04□□□□□ -0.96
COL1A1-209ENST00000495677 PATE2Q6UY27 113 aa9.04□□□□□ -0.96
COL1A1-209ENST00000495677 ST6GAL2Q96JF0 529 aa9.04□□□□□ -0.96
COL1A1-209ENST00000495677 GSN-AS1Q9NRJ2 163 aa9.04□□□□□ -0.96
COL1A1-209ENST00000495677 FAM30AQ9NZY2 134 aa9.04□□□□□ -0.96
COL1A1-209ENST00000495677 RSL24D1Q9UHA3 163 aaKnown RBP9.04□□□□□ -0.96
COL1A1-209ENST00000495677 WRBO00258 174 aa9.03□□□□□ -0.96
COL1A1-209ENST00000495677 CTDSP2O14595 271 aa9.03□□□□□ -0.96
COL1A1-209ENST00000495677 SLC25A5P05141 298 aaKnown RBP9.03□□□□□ -0.96
COL1A1-209ENST00000495677 LINC00869P0C866 280 aa9.03□□□□□ -0.96
COL1A1-209ENST00000495677 CT45A10P0DMU9 189 aa9.03□□□□□ -0.96
COL1A1-209ENST00000495677 ANXA7P20073 488 aaKnown RBP9.03□□□□□ -0.96
COL1A1-209ENST00000495677 LEPP41159 167 aa9.03□□□□□ -0.96
COL1A1-209ENST00000495677 TEPPQ6URK8 271 aa9.03□□□□□ -0.96
COL1A1-209ENST00000495677 C10orf126Q8N4M7 172 aa9.03□□□□□ -0.96
COL1A1-209ENST00000495677 MCFD2Q8NI22 146 aa9.03□□□□□ -0.96
COL1A1-209ENST00000495677 ARV1Q9H2C2 271 aa9.03□□□□□ -0.96
COL1A1-209ENST00000495677 MIXL1Q9H2W2 232 aa9.03□□□□□ -0.96
COL1A1-209ENST00000495677 HHLA3Q9XRX5 114 aa9.03□□□□□ -0.96
COL1A1-209ENST00000495677 HMCN2Q8NDA2 5059 aa9.03□□□□□ -0.96
COL1A1-209ENST00000495677 TRGV1A0A0A0MS02 117 aa9.02□□□□□ -0.97
COL1A1-209ENST00000495677 ANKRD20A5PA0PJZ0 165 aa9.02□□□□□ -0.97
COL1A1-209ENST00000495677 PRAC2D3DTV9 90 aa9.02□□□□□ -0.97
COL1A1-209ENST00000495677 FNDC10F2Z333 226 aa9.02□□□□□ -0.97
COL1A1-209ENST00000495677 PRB4P10163 310 aaPredicted RBP9.02□□□□□ -0.97
COL1A1-209ENST00000495677 TCL1AP56279 114 aa9.02□□□□□ -0.97
COL1A1-209ENST00000495677 IL18Q14116 193 aa9.02□□□□□ -0.97
COL1A1-209ENST00000495677 SPANXN5Q5MJ07 72 aa9.02□□□□□ -0.97
COL1A1-209ENST00000495677 IBA57Q5T440 356 aaKnown RBP9.02□□□□□ -0.97
COL1A1-209ENST00000495677 Q6ZSA8 131 aa9.02□□□□□ -0.97
COL1A1-209ENST00000495677 BPIFA4PQ86YQ2 179 aa9.02□□□□□ -0.97
COL1A1-209ENST00000495677 SAT2Q96F10 170 aaPredicted RBP9.02□□□□□ -0.97
COL1A1-209ENST00000495677 DIRAS2Q96HU8 199 aa9.02□□□□□ -0.97
COL1A1-209ENST00000495677 MRPL32Q9BYC8 188 aaKnown RBP9.02□□□□□ -0.97
COL1A1-209ENST00000495677 NPVFQ9HCQ7 196 aa9.02□□□□□ -0.97
COL1A1-209ENST00000495677 RABL2AQ9UBK7 228 aaPredicted RBP9.02□□□□□ -0.97
COL1A1-209ENST00000495677 RABL2BQ9UNT1 228 aa9.02□□□□□ -0.97
COL1A1-209ENST00000495677 STRAPQ9Y3F4 350 aaKnown RBP9.02□□□□□ -0.97
COL1A1-209ENST00000495677 PXMP4Q9Y6I8 212 aa9.02□□□□□ -0.97
COL1A1-209ENST00000495677 LRP1Q07954 4544 aaKnown RBP9.02□□□□□ -0.97
COL1A1-209ENST00000495677 PRAF2O60831 178 aa9.01□□□□□ -0.97
COL1A1-209ENST00000495677 OXTP01178 125 aa9.01□□□□□ -0.97
COL1A1-209ENST00000495677 FHL2Q14192 279 aa9.01□□□□□ -0.97
COL1A1-209ENST00000495677 TMEM128Q5BJH2 165 aa9.01□□□□□ -0.97
COL1A1-209ENST00000495677 IQCF2Q8IXL9 164 aa9.01□□□□□ -0.97
COL1A1-209ENST00000495677 EIF4E3Q8N5X7 224 aaKnown RBP9.01□□□□□ -0.97
COL1A1-209ENST00000495677 VGLL1Q99990 258 aa9.01□□□□□ -0.97
COL1A1-209ENST00000495677 ARL6Q9H0F7 186 aa9.01□□□□□ -0.97
COL1A1-209ENST00000495677 RBM38Q9H0Z9 239 aaKnown RBP9.01□□□□□ -0.97
COL1A1-209ENST00000495677 LINC00854A0A1B0GVQ3 168 aa9□□□□□ -0.97
COL1A1-209ENST00000495677 KLLNB2CW77 178 aa9□□□□□ -0.97
COL1A1-209ENST00000495677 WFDC10BQ8IUB3 73 aa9□□□□□ -0.97
COL1A1-209ENST00000495677 Q8N814 137 aa9□□□□□ -0.97
COL1A1-209ENST00000495677 SLIRPQ9GZT3 109 aaKnown RBP9□□□□□ -0.97
COL1A1-209ENST00000495677 PLA2G2DQ9UNK4 145 aa9□□□□□ -0.97
COL1A1-209ENST00000495677 KLF12Q9Y4X4 402 aa9□□□□□ -0.97
COL1A1-209ENST00000495677 C7orf71A4D174 169 aa8.99□□□□□ -0.97
COL1A1-209ENST00000495677 J3KRW8 73 aa8.99□□□□□ -0.97
COL1A1-209ENST00000495677 IGLC2P0DOY2 106 aa8.99□□□□□ -0.97
COL1A1-209ENST00000495677 ID3Q02535 119 aa8.99□□□□□ -0.97
COL1A1-209ENST00000495677 LINC00305Q7Z4B0 112 aa8.99□□□□□ -0.97
COL1A1-209ENST00000495677 FAM19A4Q96LR4 140 aa8.99□□□□□ -0.97
COL1A1-209ENST00000495677 SMCO3A2RU48 225 aa8.98□□□□□ -0.97
COL1A1-209ENST00000495677 K7EQD1 137 aa8.98□□□□□ -0.97
COL1A1-209ENST00000495677 SLC17A3O00476 420 aa8.98□□□□□ -0.97
COL1A1-209ENST00000495677 PSCAO43653 123 aa8.98□□□□□ -0.97
COL1A1-209ENST00000495677 CRYGDP07320 174 aa8.98□□□□□ -0.97
COL1A1-209ENST00000495677 POLR2GP62487 172 aaKnown RBP eCLIP8.98□□□□□ -0.97
COL1A1-209ENST00000495677 ZNF415Q09FC8 603 aa8.98□□□□□ -0.97
COL1A1-209ENST00000495677 LINC00528Q8N1L1 170 aa8.98□□□□□ -0.97
COL1A1-209ENST00000495677 LINC00477Q96M19 166 aa8.98□□□□□ -0.97
COL1A1-209ENST00000495677 BOLA1Q9Y3E2 137 aa8.98□□□□□ -0.97
COL1A1-209ENST00000495677 TRAV5A0A0B4J249 113 aa8.97□□□□□ -0.97
COL1A1-209ENST00000495677 H3BP45 60 aa8.97□□□□□ -0.97
COL1A1-209ENST00000495677 ZNF253O75346 499 aa8.97□□□□□ -0.97
COL1A1-209ENST00000495677 MPDU1O75352 247 aa8.97□□□□□ -0.97
COL1A1-209ENST00000495677 NMBP08949 121 aa8.97□□□□□ -0.97
COL1A1-209ENST00000495677 SRIP30626 198 aa8.97□□□□□ -0.97
COL1A1-209ENST00000495677 S100A5P33763 92 aa8.97□□□□□ -0.97
COL1A1-209ENST00000495677 GUK1Q16774 197 aa8.97□□□□□ -0.97
COL1A1-209ENST00000495677 MRPL53Q96EL3 112 aaKnown RBP8.97□□□□□ -0.97
COL1A1-209ENST00000495677 C8orf49Q96NF6 230 aa8.97□□□□□ -0.97
COL1A1-209ENST00000495677 IBA57-AS1B1ANH7 110 aa8.96□□□□□ -0.98
COL1A1-209ENST00000495677 H3BQ15 152 aa8.96□□□□□ -0.98
COL1A1-209ENST00000495677 IGHV3-53P01767 116 aa8.96□□□□□ -0.98
COL1A1-209ENST00000495677 ORM1P02763 201 aa8.96□□□□□ -0.98
COL1A1-209ENST00000495677 SNRPCP09234 159 aaKnown RBP8.96□□□□□ -0.98
COL1A1-209ENST00000495677 CRISP2P16562 243 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms