RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 PKD1P98161 4303 aa8.71□□□□□ -1.01
CSNK1E-212ENST00000494610 IGHV3OR16-8A0A075B7F1 116 aa8.71□□□□□ -1.02
CSNK1E-212ENST00000494610 A0A1B0GV50 99 aa8.71□□□□□ -1.02
CSNK1E-212ENST00000494610 A0A1W2PRE2 83 aa8.71□□□□□ -1.02
CSNK1E-212ENST00000494610 TMEM213A2RRL7 107 aa8.71□□□□□ -1.02
CSNK1E-212ENST00000494610 C2orf70A6NJV1 201 aa8.71□□□□□ -1.02
CSNK1E-212ENST00000494610 FOLR2P14207 255 aa8.71□□□□□ -1.02
CSNK1E-212ENST00000494610 PEA15Q15121 130 aa8.71□□□□□ -1.02
CSNK1E-212ENST00000494610 SIGLEC15Q6ZMC9 328 aa8.71□□□□□ -1.02
CSNK1E-212ENST00000494610 COMMD7Q86VX2 200 aa8.71□□□□□ -1.02
CSNK1E-212ENST00000494610 LYPD1Q8N2G4 141 aa8.71□□□□□ -1.02
CSNK1E-212ENST00000494610 DYNLRB2Q8TF09 96 aa8.71□□□□□ -1.02
CSNK1E-212ENST00000494610 PCNPQ8WW12 178 aaKnown RBP8.71□□□□□ -1.02
CSNK1E-212ENST00000494610 RHPN1-AS1Q9BWJ2 59 aa8.71□□□□□ -1.02
CSNK1E-212ENST00000494610 TRAV5A0A0B4J249 113 aa8.7□□□□□ -1.02
CSNK1E-212ENST00000494610 RBFOX3A6NFN3 312 aa8.7□□□□□ -1.02
CSNK1E-212ENST00000494610 CHEK1O14757 476 aa8.7□□□□□ -1.02
CSNK1E-212ENST00000494610 ZNF207O43670 478 aaKnown RBP8.7□□□□□ -1.02
CSNK1E-212ENST00000494610 OR10J4P0C629 311 aa8.7□□□□□ -1.02
CSNK1E-212ENST00000494610 NBEAP1P0C6P0 100 aa8.7□□□□□ -1.02
CSNK1E-212ENST00000494610 PSG9Q00887 426 aa8.7□□□□□ -1.02
CSNK1E-212ENST00000494610 TM4SF20Q53R12 229 aa8.7□□□□□ -1.02
CSNK1E-212ENST00000494610 MORN5Q5VZ52 161 aa8.7□□□□□ -1.02
CSNK1E-212ENST00000494610 LEMD1Q68G75 181 aa8.7□□□□□ -1.02
CSNK1E-212ENST00000494610 GLMPQ8WWB7 406 aa8.7□□□□□ -1.02
CSNK1E-212ENST00000494610 FXYD5Q96DB9 178 aa8.7□□□□□ -1.02
CSNK1E-212ENST00000494610 EIF5A2Q9GZV4 153 aaKnown RBP8.7□□□□□ -1.02
CSNK1E-212ENST00000494610 AAMDCQ9H7C9 122 aa8.7□□□□□ -1.02
CSNK1E-212ENST00000494610 VAX2Q9UIW0 290 aa8.7□□□□□ -1.02
CSNK1E-212ENST00000494610 DNAH11Q96DT5 4516 aa8.69□□□□□ -1.02
CSNK1E-212ENST00000494610 LOC102723971A0A1B0GUV8 181 aa8.69□□□□□ -1.02
CSNK1E-212ENST00000494610 PDE6DO43924 150 aa8.69□□□□□ -1.02
CSNK1E-212ENST00000494610 IGLC2P0DOY2 106 aa8.69□□□□□ -1.02
CSNK1E-212ENST00000494610 PYYP10082 97 aa8.69□□□□□ -1.02
CSNK1E-212ENST00000494610 MEF2BQ02080 365 aaPredicted RBP8.69□□□□□ -1.02
CSNK1E-212ENST00000494610 TOR2AQ5JU69 321 aa8.69□□□□□ -1.02
CSNK1E-212ENST00000494610 ZNF506Q5JVG8 444 aa8.69□□□□□ -1.02
CSNK1E-212ENST00000494610 CEMP1Q6PRD7 247 aaPredicted RBP8.69□□□□□ -1.02
CSNK1E-212ENST00000494610 TMEM61Q8N0U2 210 aa8.69□□□□□ -1.02
CSNK1E-212ENST00000494610 EIF4E3Q8N5X7 224 aaKnown RBP8.69□□□□□ -1.02
CSNK1E-212ENST00000494610 OR2K2Q8NGT1 345 aa8.69□□□□□ -1.02
CSNK1E-212ENST00000494610 ZNF503Q96F45 646 aa8.69□□□□□ -1.02
CSNK1E-212ENST00000494610 MLXQ9UH92 298 aa8.69□□□□□ -1.02
CSNK1E-212ENST00000494610 TRBV19A0A075B6N1 114 aa8.68□□□□□ -1.02
CSNK1E-212ENST00000494610 TRAV2A0A0B4J234 112 aa8.68□□□□□ -1.02
CSNK1E-212ENST00000494610 C11orf94C9JXX5 98 aa8.68□□□□□ -1.02
CSNK1E-212ENST00000494610 F6UZH7 168 aa8.68□□□□□ -1.02
CSNK1E-212ENST00000494610 CBLN1P23435 193 aa8.68□□□□□ -1.02
CSNK1E-212ENST00000494610 PAFAH1B2P68402 229 aa8.68□□□□□ -1.02
CSNK1E-212ENST00000494610 CST9LP1Q5W188 147 aa8.68□□□□□ -1.02
CSNK1E-212ENST00000494610 ARL6IP6Q8N6S5 226 aa8.68□□□□□ -1.02
CSNK1E-212ENST00000494610 BLNKQ8WV28 456 aa8.68□□□□□ -1.02
CSNK1E-212ENST00000494610 RPUSD4Q96CM3 377 aaKnown RBP8.68□□□□□ -1.02
CSNK1E-212ENST00000494610 NRN1Q9NPD7 142 aa8.68□□□□□ -1.02
CSNK1E-212ENST00000494610 OTORQ9NRC9 128 aa8.68□□□□□ -1.02
CSNK1E-212ENST00000494610 PRELID1Q9Y255 219 aa8.68□□□□□ -1.02
CSNK1E-212ENST00000494610 TRAV25A0A0B4J276 109 aa8.67□□□□□ -1.02
CSNK1E-212ENST00000494610 SERTM2A0A1B0GWG4 89 aa8.67□□□□□ -1.02
CSNK1E-212ENST00000494610 FAM74A7A6NL05 159 aa8.67□□□□□ -1.02
CSNK1E-212ENST00000494610 TMEM250H0YL14 139 aa8.67□□□□□ -1.02
CSNK1E-212ENST00000494610 MRPS12O15235 138 aaKnown RBP8.67□□□□□ -1.02
CSNK1E-212ENST00000494610 PAGE4O60829 102 aa8.67□□□□□ -1.02
CSNK1E-212ENST00000494610 ID1P41134 155 aa8.67□□□□□ -1.02
CSNK1E-212ENST00000494610 CSN1S1P47710 185 aa8.67□□□□□ -1.02
CSNK1E-212ENST00000494610 UBE2G2P60604 165 aa8.67□□□□□ -1.02
CSNK1E-212ENST00000494610 RPL11P62913 178 aaKnown RBP8.67□□□□□ -1.02
CSNK1E-212ENST00000494610 DEFB135Q30KP9 77 aa8.67□□□□□ -1.02
CSNK1E-212ENST00000494610 TCF24Q7RTU0 167 aa8.67□□□□□ -1.02
CSNK1E-212ENST00000494610 C5orf17Q8NAS9 161 aa8.67□□□□□ -1.02
CSNK1E-212ENST00000494610 CMTM2Q8TAZ6 248 aa8.67□□□□□ -1.02
CSNK1E-212ENST00000494610 MRPL53Q96EL3 112 aaKnown RBP8.67□□□□□ -1.02
CSNK1E-212ENST00000494610 TMPRSS5Q9H3S3 457 aa8.67□□□□□ -1.02
CSNK1E-212ENST00000494610 TREM1Q9NP99 234 aa8.67□□□□□ -1.02
CSNK1E-212ENST00000494610 IGHV3OR16-13A0A075B7E8 117 aa8.66□□□□□ -1.02
CSNK1E-212ENST00000494610 LOC102724200A0A096LPH7 203 aaPredicted RBP8.66□□□□□ -1.02
CSNK1E-212ENST00000494610 IGHV3-49A0A0A0MS15 119 aa8.66□□□□□ -1.02
CSNK1E-212ENST00000494610 IGHV3-74A0A0B4J1X5 117 aa8.66□□□□□ -1.02
CSNK1E-212ENST00000494610 IGHV3-66A0A0C4DH42 116 aa8.66□□□□□ -1.02
CSNK1E-212ENST00000494610 K7EQM0 130 aa8.66□□□□□ -1.02
CSNK1E-212ENST00000494610 EIF3GO75821 320 aaKnown RBP eCLIP8.66□□□□□ -1.02
CSNK1E-212ENST00000494610 APOHP02749 345 aaPredicted RBP8.66□□□□□ -1.02
CSNK1E-212ENST00000494610 CCL20P78556 96 aa8.66□□□□□ -1.02
CSNK1E-212ENST00000494610 RBPMS2Q6ZRY4 209 aaKnown RBP8.66□□□□□ -1.02
CSNK1E-212ENST00000494610 RXFP4Q8TDU9 374 aa8.66□□□□□ -1.02
CSNK1E-212ENST00000494610 HIST1H2BAQ96A08 127 aa8.66□□□□□ -1.02
CSNK1E-212ENST00000494610 Q9H3A6 140 aa8.66□□□□□ -1.02
CSNK1E-212ENST00000494610 ZNF586Q9NXT0 402 aa8.66□□□□□ -1.02
CSNK1E-212ENST00000494610 NUPR2A6NF83 97 aa8.65□□□□□ -1.02
CSNK1E-212ENST00000494610 FBLL1A6NHQ2 334 aaKnown RBP8.65□□□□□ -1.02
CSNK1E-212ENST00000494610 DNASE2O00115 360 aaPredicted RBP8.65□□□□□ -1.02
CSNK1E-212ENST00000494610 ISLRO14498 428 aa8.65□□□□□ -1.02
CSNK1E-212ENST00000494610 SNRPD3P62318 126 aaKnown RBP8.65□□□□□ -1.02
CSNK1E-212ENST00000494610 ICAM4Q14773 271 aa8.65□□□□□ -1.02
CSNK1E-212ENST00000494610 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.65□□□□□ -1.02
CSNK1E-212ENST00000494610 C16orf92Q96LL3 132 aa8.65□□□□□ -1.02
CSNK1E-212ENST00000494610 SLC35B3Q9H1N7 401 aa8.65□□□□□ -1.02
CSNK1E-212ENST00000494610 ZNF331Q9NQX6 463 aaPredicted RBP8.65□□□□□ -1.02
CSNK1E-212ENST00000494610 OR4C46A6NHA9 309 aa8.64□□□□□ -1.03
CSNK1E-212ENST00000494610 H3BQ15 152 aa8.64□□□□□ -1.03
CSNK1E-212ENST00000494610 TSPAN4O14817 238 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms