RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 CXCL2P19875 107 aa9.32□□□□□ -0.92
GPNMB-213ENST00000492512 SELENOTP62341 195 aa9.32□□□□□ -0.92
GPNMB-213ENST00000492512 IFITM3Q01628 133 aa9.32□□□□□ -0.92
GPNMB-213ENST00000492512 PYGO2Q9BRQ0 406 aa9.32□□□□□ -0.92
GPNMB-213ENST00000492512 SLC50A1Q9BRV3 221 aa9.32□□□□□ -0.92
GPNMB-213ENST00000492512 ZNF331Q9NQX6 463 aaPredicted RBP9.32□□□□□ -0.92
GPNMB-213ENST00000492512 MCUBQ9NWR8 336 aa9.32□□□□□ -0.92
GPNMB-213ENST00000492512 RABL2AQ9UBK7 228 aaPredicted RBP9.32□□□□□ -0.92
GPNMB-213ENST00000492512 RABL2BQ9UNT1 228 aa9.32□□□□□ -0.92
GPNMB-213ENST00000492512 RNF24Q9Y225 148 aa9.32□□□□□ -0.92
GPNMB-213ENST00000492512 FUT9Q9Y231 359 aa9.32□□□□□ -0.92
GPNMB-213ENST00000492512 STRAPQ9Y3F4 350 aaKnown RBP9.32□□□□□ -0.92
GPNMB-213ENST00000492512 ANKRD20A5PA0PJZ0 165 aa9.31□□□□□ -0.92
GPNMB-213ENST00000492512 PAX4O43316 350 aa9.31□□□□□ -0.92
GPNMB-213ENST00000492512 PFDN1O60925 122 aa9.31□□□□□ -0.92
GPNMB-213ENST00000492512 SNRPCP09234 159 aaKnown RBP9.31□□□□□ -0.92
GPNMB-213ENST00000492512 SLC25A6P12236 298 aa9.31□□□□□ -0.92
GPNMB-213ENST00000492512 PLP1P60201 277 aa9.31□□□□□ -0.92
GPNMB-213ENST00000492512 SOSTQ9BQB4 213 aa9.31□□□□□ -0.92
GPNMB-213ENST00000492512 SRRQ9GZT4 340 aa9.31□□□□□ -0.92
GPNMB-213ENST00000492512 ARL6Q9H0F7 186 aa9.31□□□□□ -0.92
GPNMB-213ENST00000492512 GSN-AS1Q9NRJ2 163 aa9.31□□□□□ -0.92
GPNMB-213ENST00000492512 LY96Q9Y6Y9 160 aa9.31□□□□□ -0.92
GPNMB-213ENST00000492512 TRGV1A0A0A0MS02 117 aa9.3□□□□□ -0.92
GPNMB-213ENST00000492512 PRAC2D3DTV9 90 aa9.3□□□□□ -0.92
GPNMB-213ENST00000492512 MRPS12O15235 138 aaKnown RBP9.3□□□□□ -0.92
GPNMB-213ENST00000492512 ZNF324O75467 553 aaPredicted RBP9.3□□□□□ -0.92
GPNMB-213ENST00000492512 LEPP41159 167 aa9.3□□□□□ -0.92
GPNMB-213ENST00000492512 IL18Q14116 193 aa9.3□□□□□ -0.92
GPNMB-213ENST00000492512 ZNF680Q8NEM1 530 aa9.3□□□□□ -0.92
GPNMB-213ENST00000492512 SDHCQ99643 169 aaPredicted RBP9.3□□□□□ -0.92
GPNMB-213ENST00000492512 TMEM70Q9BUB7 260 aa9.3□□□□□ -0.92
GPNMB-213ENST00000492512 MSRB1Q9NZV6 116 aa9.3□□□□□ -0.92
GPNMB-213ENST00000492512 hCG_2014768A0A024R1R8 64 aa9.29□□□□□ -0.92
GPNMB-213ENST00000492512 NPIPB6E9PJ23 425 aa9.29□□□□□ -0.92
GPNMB-213ENST00000492512 CTDSPLO15194 276 aa9.29□□□□□ -0.92
GPNMB-213ENST00000492512 PYDC2Q56P42 97 aa9.29□□□□□ -0.92
GPNMB-213ENST00000492512 TMEM128Q5BJH2 165 aa9.29□□□□□ -0.92
GPNMB-213ENST00000492512 LYPD5Q6UWN5 251 aa9.29□□□□□ -0.92
GPNMB-213ENST00000492512 PATE2Q6UY27 113 aa9.29□□□□□ -0.92
GPNMB-213ENST00000492512 ZNF431Q8TF32 576 aaPredicted RBP9.29□□□□□ -0.92
GPNMB-213ENST00000492512 LINC00467Q9BRT7 94 aa9.29□□□□□ -0.92
GPNMB-213ENST00000492512 ARV1Q9H2C2 271 aa9.29□□□□□ -0.92
GPNMB-213ENST00000492512 IGLV5-52A0A0A0MRZ9 124 aa9.28□□□□□ -0.92
GPNMB-213ENST00000492512 LINC00854A0A1B0GVQ3 168 aa9.28□□□□□ -0.92
GPNMB-213ENST00000492512 CT45A10P0DMU9 189 aa9.28□□□□□ -0.92
GPNMB-213ENST00000492512 IL7P13232 177 aa9.28□□□□□ -0.92
GPNMB-213ENST00000492512 VAMP1P23763 118 aa9.28□□□□□ -0.92
GPNMB-213ENST00000492512 BCAP31P51572 246 aa9.28□□□□□ -0.92
GPNMB-213ENST00000492512 BPIFA4PQ86YQ2 179 aa9.28□□□□□ -0.92
GPNMB-213ENST00000492512 LRTM2Q8N967 370 aa9.28□□□□□ -0.92
GPNMB-213ENST00000492512 ODF3Q96PU9 254 aa9.28□□□□□ -0.92
GPNMB-213ENST00000492512 PRO0255Q9UI72 69 aa9.28□□□□□ -0.92
GPNMB-213ENST00000492512 PXMP4Q9Y6I8 212 aa9.28□□□□□ -0.92
GPNMB-213ENST00000492512 KRTAP29-1A8MX34 341 aaPredicted RBP9.27□□□□□ -0.93
GPNMB-213ENST00000492512 H3BTX0 84 aa9.27□□□□□ -0.93
GPNMB-213ENST00000492512 K7EP13 123 aa9.27□□□□□ -0.93
GPNMB-213ENST00000492512 SLC17A3O00476 420 aa9.27□□□□□ -0.93
GPNMB-213ENST00000492512 IGHV3-53P01767 116 aa9.27□□□□□ -0.93
GPNMB-213ENST00000492512 EVI2AP22794 236 aa9.27□□□□□ -0.93
GPNMB-213ENST00000492512 RRAS2P62070 204 aaPredicted RBP9.27□□□□□ -0.93
GPNMB-213ENST00000492512 SLAQ13239 276 aa9.27□□□□□ -0.93
GPNMB-213ENST00000492512 ASAH1Q13510 395 aa9.27□□□□□ -0.93
GPNMB-213ENST00000492512 MRPL23Q16540 153 aaKnown RBP9.27□□□□□ -0.93
GPNMB-213ENST00000492512 TRIQKQ629K1 86 aa9.27□□□□□ -0.93
GPNMB-213ENST00000492512 NEGR1Q7Z3B1 354 aa9.27□□□□□ -0.93
GPNMB-213ENST00000492512 LINC00305Q7Z4B0 112 aa9.27□□□□□ -0.93
GPNMB-213ENST00000492512 ZBTB8BQ8NAP8 495 aaPredicted RBP9.27□□□□□ -0.93
GPNMB-213ENST00000492512 C11orf72Q8NBR9 251 aa9.27□□□□□ -0.93
GPNMB-213ENST00000492512 ST6GAL2Q96JF0 529 aa9.27□□□□□ -0.93
GPNMB-213ENST00000492512 SLC25A5P05141 298 aaKnown RBP9.26□□□□□ -0.93
GPNMB-213ENST00000492512 HOXB5P09067 269 aa9.26□□□□□ -0.93
GPNMB-213ENST00000492512 SERTAD4-AS1Q5TG53 156 aa9.26□□□□□ -0.93
GPNMB-213ENST00000492512 PXDC1Q5TGL8 231 aa9.26□□□□□ -0.93
GPNMB-213ENST00000492512 TEPPQ6URK8 271 aa9.26□□□□□ -0.93
GPNMB-213ENST00000492512 EIF4E3Q8N5X7 224 aaKnown RBP9.26□□□□□ -0.93
GPNMB-213ENST00000492512 NTN5Q8WTR8 489 aaPredicted RBP9.26□□□□□ -0.93
GPNMB-213ENST00000492512 NPVFQ9HCQ7 196 aa9.26□□□□□ -0.93
GPNMB-213ENST00000492512 PSENENQ9NZ42 101 aa9.26□□□□□ -0.93
GPNMB-213ENST00000492512 HHLA3Q9XRX5 114 aa9.26□□□□□ -0.93
GPNMB-213ENST00000492512 KLF12Q9Y4X4 402 aa9.26□□□□□ -0.93
GPNMB-213ENST00000492512 C7orf71A4D174 169 aa9.25□□□□□ -0.93
GPNMB-213ENST00000492512 K7EPK0 472 aa9.25□□□□□ -0.93
GPNMB-213ENST00000492512 GOSR2O14653 212 aa9.25□□□□□ -0.93
GPNMB-213ENST00000492512 PSCAO43653 123 aa9.25□□□□□ -0.93
GPNMB-213ENST00000492512 SPINK4O60575 86 aa9.25□□□□□ -0.93
GPNMB-213ENST00000492512 PRAF2O60831 178 aa9.25□□□□□ -0.93
GPNMB-213ENST00000492512 PLA2G1BP04054 148 aaKnown RBP9.25□□□□□ -0.93
GPNMB-213ENST00000492512 INPP1P49441 399 aa9.25□□□□□ -0.93
GPNMB-213ENST00000492512 CRYBA4P53673 196 aa9.25□□□□□ -0.93
GPNMB-213ENST00000492512 TCL1AP56279 114 aa9.25□□□□□ -0.93
GPNMB-213ENST00000492512 SLC38A11Q08AI6 406 aa9.25□□□□□ -0.93
GPNMB-213ENST00000492512 BAK1Q16611 211 aa9.25□□□□□ -0.93
GPNMB-213ENST00000492512 ANXA2RQ3ZCQ2 193 aa9.25□□□□□ -0.93
GPNMB-213ENST00000492512 MZT2BQ6NZ67 158 aa9.25□□□□□ -0.93
GPNMB-213ENST00000492512 WFDC10BQ8IUB3 73 aa9.25□□□□□ -0.93
GPNMB-213ENST00000492512 SYT8Q8NBV8 401 aa9.25□□□□□ -0.93
GPNMB-213ENST00000492512 C8orf49Q96NF6 230 aa9.25□□□□□ -0.93
GPNMB-213ENST00000492512 COX7A2P2O60397 106 aa9.24□□□□□ -0.93
GPNMB-213ENST00000492512 POLR2GP62487 172 aaKnown RBP eCLIP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms