RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 C20orf144Q9BQM9 153 aa10.7□□□□□ -0.7
COL2A1-207ENST00000490609 SCRT2Q9NQ03 307 aa10.7□□□□□ -0.7
COL2A1-207ENST00000490609 PPP1R14DQ9NXH3 145 aa10.7□□□□□ -0.7
COL2A1-207ENST00000490609 TRAV5A0A0B4J249 113 aa10.69□□□□□ -0.7
COL2A1-207ENST00000490609 BTF3P20290 206 aaKnown RBP10.69□□□□□ -0.7
COL2A1-207ENST00000490609 Q6ZTI0 123 aa10.69□□□□□ -0.7
COL2A1-207ENST00000490609 C11orf72Q8NBR9 251 aa10.69□□□□□ -0.7
COL2A1-207ENST00000490609 OR10P1Q8NGE3 313 aa10.69□□□□□ -0.7
COL2A1-207ENST00000490609 LRRC20Q8TCA0 184 aa10.69□□□□□ -0.7
COL2A1-207ENST00000490609 SLC50A1Q9BRV3 221 aa10.69□□□□□ -0.7
COL2A1-207ENST00000490609 TMPRSS5Q9H3S3 457 aa10.69□□□□□ -0.7
COL2A1-207ENST00000490609 C11orf1Q9H5F2 150 aa10.69□□□□□ -0.7
COL2A1-207ENST00000490609 MRPS16Q9Y3D3 137 aaKnown RBP10.69□□□□□ -0.7
COL2A1-207ENST00000490609 A0A096LPF7 62 aa10.68□□□□□ -0.7
COL2A1-207ENST00000490609 H3BNG1 76 aa10.68□□□□□ -0.7
COL2A1-207ENST00000490609 TSC22D2O75157 780 aa10.68□□□□□ -0.7
COL2A1-207ENST00000490609 MBPP02686 304 aaPredicted RBP10.68□□□□□ -0.7
COL2A1-207ENST00000490609 TAS2R30P59541 319 aa10.68□□□□□ -0.7
COL2A1-207ENST00000490609 PXDC1Q5TGL8 231 aa10.68□□□□□ -0.7
COL2A1-207ENST00000490609 OR10J6PQ8NGY7 276 aa10.68□□□□□ -0.7
COL2A1-207ENST00000490609 RBM38Q9H0Z9 239 aaKnown RBP10.68□□□□□ -0.7
COL2A1-207ENST00000490609 DMBT1Q9UGM3 2413 aaPredicted RBP10.67□□□□□ -0.7
COL2A1-207ENST00000490609 TRAV12-3A0A0B4J271 114 aa10.67□□□□□ -0.7
COL2A1-207ENST00000490609 A0A1W2PPQ1 181 aa10.67□□□□□ -0.7
COL2A1-207ENST00000490609 NPIPB6E9PJ23 425 aa10.67□□□□□ -0.7
COL2A1-207ENST00000490609 GOSR2O14653 212 aa10.67□□□□□ -0.7
COL2A1-207ENST00000490609 FUSP35637 526 aaKnown RBP eCLIP10.67□□□□□ -0.7
COL2A1-207ENST00000490609 DAZ2Q13117 558 aaKnown RBP10.67□□□□□ -0.7
COL2A1-207ENST00000490609 IAH1Q2TAA2 248 aaPredicted RBP10.67□□□□□ -0.7
COL2A1-207ENST00000490609 BPIFA4PQ86YQ2 179 aa10.67□□□□□ -0.7
COL2A1-207ENST00000490609 FAM19A4Q96LR4 140 aa10.67□□□□□ -0.7
COL2A1-207ENST00000490609 ZNF586Q9NXT0 402 aa10.67□□□□□ -0.7
COL2A1-207ENST00000490609 J3KRW8 73 aa10.66□□□□□ -0.7
COL2A1-207ENST00000490609 ZNF324O75467 553 aaPredicted RBP10.66□□□□□ -0.7
COL2A1-207ENST00000490609 SCGB1D2O95969 90 aa10.66□□□□□ -0.7
COL2A1-207ENST00000490609 Q6ZQT7 251 aa10.66□□□□□ -0.7
COL2A1-207ENST00000490609 ZNF546Q86UE3 836 aa10.66□□□□□ -0.7
COL2A1-207ENST00000490609 MITD1Q8WV92 249 aa10.66□□□□□ -0.7
COL2A1-207ENST00000490609 ODF3Q96PU9 254 aa10.66□□□□□ -0.7
COL2A1-207ENST00000490609 GGACTQ9BVM4 153 aa10.66□□□□□ -0.7
COL2A1-207ENST00000490609 NDUFB4O95168 129 aa10.65□□□□□ -0.7
COL2A1-207ENST00000490609 RLN2P04090 185 aa10.65□□□□□ -0.7
COL2A1-207ENST00000490609 ERCC8Q13216 396 aa10.65□□□□□ -0.7
COL2A1-207ENST00000490609 C10orf113Q5VZT2 155 aa10.65□□□□□ -0.7
COL2A1-207ENST00000490609 MIC13Q5XKP0 118 aa10.65□□□□□ -0.7
COL2A1-207ENST00000490609 C18orf15Q96N68 181 aa10.65□□□□□ -0.7
COL2A1-207ENST00000490609 DNAJC4Q9NNZ3 241 aa10.65□□□□□ -0.7
COL2A1-207ENST00000490609 GSKIPQ9P0R6 139 aa10.65□□□□□ -0.7
COL2A1-207ENST00000490609 MGAT4CQ9UBM8 478 aa10.65□□□□□ -0.7
COL2A1-207ENST00000490609 TNFRSF18Q9Y5U5 241 aa10.65□□□□□ -0.7
COL2A1-207ENST00000490609 NAP1L6A6NFF2 107 aa10.64□□□□□ -0.71
COL2A1-207ENST00000490609 M0R3E3 92 aa10.64□□□□□ -0.71
COL2A1-207ENST00000490609 COX7A2P2O60397 106 aa10.64□□□□□ -0.71
COL2A1-207ENST00000490609 LINC00315P59091 139 aa10.64□□□□□ -0.71
COL2A1-207ENST00000490609 CD300CQ08708 224 aa10.64□□□□□ -0.71
COL2A1-207ENST00000490609 TTC32Q5I0X7 151 aa10.64□□□□□ -0.71
COL2A1-207ENST00000490609 GSN-AS1Q9NRJ2 163 aa10.64□□□□□ -0.71
COL2A1-207ENST00000490609 PXMP4Q9Y6I8 212 aa10.64□□□□□ -0.71
COL2A1-207ENST00000490609 FLG2Q5D862 2391 aaPredicted RBP10.63□□□□□ -0.71
COL2A1-207ENST00000490609 KLLNB2CW77 178 aa10.63□□□□□ -0.71
COL2A1-207ENST00000490609 CCSO14618 274 aa10.63□□□□□ -0.71
COL2A1-207ENST00000490609 S100A5P33763 92 aa10.63□□□□□ -0.71
COL2A1-207ENST00000490609 XGP55808 180 aa10.63□□□□□ -0.71
COL2A1-207ENST00000490609 NRARPQ7Z6K4 114 aa10.63□□□□□ -0.71
COL2A1-207ENST00000490609 S100A7AQ86SG5 101 aa10.63□□□□□ -0.71
COL2A1-207ENST00000490609 CCDC28AQ8IWP9 274 aa10.63□□□□□ -0.71
COL2A1-207ENST00000490609 PYGO2Q9BRQ0 406 aa10.63□□□□□ -0.71
COL2A1-207ENST00000490609 AGPAT4-IT1Q9H0P7 198 aa10.63□□□□□ -0.71
COL2A1-207ENST00000490609 KLF12Q9Y4X4 402 aa10.63□□□□□ -0.71
COL2A1-207ENST00000490609 CCDC160A6NGH7 325 aa10.62□□□□□ -0.71
COL2A1-207ENST00000490609 SNURFLB1AK76 121 aa10.62□□□□□ -0.71
COL2A1-207ENST00000490609 PLA2G10O15496 165 aa10.62□□□□□ -0.71
COL2A1-207ENST00000490609 CAMLGP49069 296 aa10.62□□□□□ -0.71
COL2A1-207ENST00000490609 VWC2Q2TAL6 325 aa10.62□□□□□ -0.71
COL2A1-207ENST00000490609 PRR9Q5T870 116 aa10.62□□□□□ -0.71
COL2A1-207ENST00000490609 LINC00467Q9BRT7 94 aa10.62□□□□□ -0.71
COL2A1-207ENST00000490609 TP53TG3Q9ULZ0 132 aa10.62□□□□□ -0.71
COL2A1-207ENST00000490609 RNF24Q9Y225 148 aa10.62□□□□□ -0.71
COL2A1-207ENST00000490609 WDR83OSQ9Y284 106 aa10.62□□□□□ -0.71
COL2A1-207ENST00000490609 TRBV19A0A075B6N1 114 aa10.61□□□□□ -0.71
COL2A1-207ENST00000490609 FAM24AA6NFZ4 105 aa10.61□□□□□ -0.71
COL2A1-207ENST00000490609 SPINK4O60575 86 aa10.61□□□□□ -0.71
COL2A1-207ENST00000490609 CST7O76096 145 aa10.61□□□□□ -0.71
COL2A1-207ENST00000490609 LEPP41159 167 aa10.61□□□□□ -0.71
COL2A1-207ENST00000490609 IL15RAQ13261 267 aa10.61□□□□□ -0.71
COL2A1-207ENST00000490609 BTN1A1Q13410 526 aa10.61□□□□□ -0.71
COL2A1-207ENST00000490609 C7orf71A4D174 169 aa10.6□□□□□ -0.71
COL2A1-207ENST00000490609 ZNF253O75346 499 aa10.6□□□□□ -0.71
COL2A1-207ENST00000490609 SLC25A5P05141 298 aaKnown RBP10.6□□□□□ -0.71
COL2A1-207ENST00000490609 GUK1Q16774 197 aa10.6□□□□□ -0.71
COL2A1-207ENST00000490609 ANXA2RQ3ZCQ2 193 aa10.6□□□□□ -0.71
COL2A1-207ENST00000490609 SPANXN2Q5MJ10 180 aa10.6□□□□□ -0.71
COL2A1-207ENST00000490609 RPL29P47914 159 aaKnown RBP10.59□□□□□ -0.71
COL2A1-207ENST00000490609 GCSAMLQ5JQS6 135 aa10.59□□□□□ -0.71
COL2A1-207ENST00000490609 ZFAND2AQ8N6M9 145 aa10.59□□□□□ -0.71
COL2A1-207ENST00000490609 CHAC2Q8WUX2 184 aa10.59□□□□□ -0.71
COL2A1-207ENST00000490609 MRPL53Q96EL3 112 aaKnown RBP10.59□□□□□ -0.71
COL2A1-207ENST00000490609 SLC39A9Q9NUM3 307 aa10.59□□□□□ -0.71
COL2A1-207ENST00000490609 FUT9Q9Y231 359 aa10.59□□□□□ -0.71
COL2A1-207ENST00000490609 IGSF23A1L1A6 192 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms